Propagation of LfaR regulog to Serratia proteamaculans 568
| Source regulog: | LfaR - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Sugar utilization |
| Effector: | |
| Phylum: | Proteobacteria/Gamma |
| Propagated regulon: | |
| Target genome | Serratia proteamaculans 568 |
| Orthologous TF(s) | Spro_3600 |
| Regulated genes | 2 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -340
Score: 6.2 Sequence: ATGAAAATATTTTCAC
Locus tag: Spro_3599
|
||||
| Spro_3599 | -340 | 6.2 | ATGAAAATATTTTCAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lfaT | ||||
| Ortholog function: Hexuronate-like transporter | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_02296 | -267 | 6.4 | ATGAAAAAATTTTCAT |
| -190 | 4.8 | ATGAGAAAACTTGCAC | ||
| Enterobacter sp. 638 | Ent638_1313 | -265 | 5.8 | ATGCAAAAATTTTCAT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1967 | -295 | 5.3 | ATGACAAAGTTTTCAT |
| -217 | 5.6 | ATGAAAATGTTTTCAA | ||
| -95 | 4.6 | ATGAAAATGTTCTGAT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00853 | -273 | 6.2 | ATGAAAGAATTTTCAT |
| -196 | 5.6 | ATGAAAAAACTTGCAT | ||
| Serratia proteamaculans 568 | Spro_3599 | -340 | 6.2 | ATGAAAATATTTTCAC |
| -263 | 5.4 | ATGAAAATTTTTGCAA | ||
| Yersinia pestis KIM | y3232 | -368 | 6.4 | ATGAAAAAATTTTCAT |
| -291 | 5.1 | ATGAGAATTCTTTCAA | ||
|
Position: -118
Score: 5.2 Sequence: TTGCAAAAATTTTCAT
Position: -41
Score: 5.7 Sequence: GTGAAAATATTTTCAT
Locus tag: Spro_3600
|
||||
| Spro_3600 | -118 | 5.2 | TTGCAAAAATTTTCAT | |
| -41 | 5.7 | GTGAAAATATTTTCAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lfaR | ||||
| Ortholog function: Transcriptional regulator for sugar utilization, LacI family | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_02295 | -23 | 6.2 | ATGAAAATTTTTTCAT |
| Enterobacter sp. 638 | Ent638_1314 | -41 | 5.6 | ATGAAAATTTTTGCAT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1966 | -241 | 4.7 | ATCAGAACATTTTCAT |
| -119 | 5.3 | TTGAAAACATTTTCAT | ||
| -41 | 5.2 | ATGAAAACTTTGTCAT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00854 | -118 | 5.3 | ATGCAAGTTTTTTCAT |
| -41 | 5.9 | ATGAAAATTCTTTCAT | ||
| Serratia proteamaculans 568 | Spro_3600 | -118 | 5.2 | TTGCAAAAATTTTCAT |
| -41 | 5.7 | GTGAAAATATTTTCAT | ||
| Yersinia pestis KIM | y3231 | -118 | 5 | TTGAAAGAATTCTCAT |
| -41 | 6.2 | ATGAAAATTTTTTCAT | ||