Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Fur regulog to Serratia proteamaculans 568

Reference regulog properties
Source regulog: Fur - Enterobacteriales
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor (activator)
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Serratia proteamaculans 568
Orthologous TF(s) Spro_1236
Regulated genes 46
Built upon 656 sites [see more]
Predicted regulatory interactions in Serratia proteamaculans 568
Locus tag Position Score Sequence
Position: -105
Score: 4.9
Sequence: GGCATTGATAATCATTTTC
Position: -99
Score: 5.2
Sequence: GATAATCATTTTCAATATC
Locus tag: Spro_0081
Spro_0081 -105 4.9 GGCATTGATAATCATTTTC
-99 5.2 GATAATCATTTTCAATATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: sodA
Ortholog function: manganese/iron superoxide dismutase
Escherichia coli str. K-12 substr. MG1655 b3908 -99 4.7 GGCATTGATAATCATTTTC
-93 5 GATAATCATTTTCAATATC
Salmonella typhimurium LT2 STM4055 -99 4.7 GGCATTGATAATCATTTTC
-93 5 GATAATCATTTTCAATATC
Citrobacter koseri ATCC BAA-895 CKO_03093 -88 4.3 GGCATTGATAAGCATTTTC
-82 4.4 GATAAGCATTTTCAATATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04217 -88 4.3 GGCATTGATAAGCATTTTC
-82 4 GATAAGCATTTTCAATACC
Enterobacter sp. 638 Ent638_4063 -100 4.7 GGCATTGATAATCATTTTC
-94 5 GATAATCATTTTCAATATC
Yersinia pestis KIM y4080 -104 4.4 AGGTTTGATAATCATTTTC
-98 5 GATAATCATTTTCAATATC
Serratia proteamaculans 568 Spro_0081 -105 4.7 GGCATTGATAATCATTTTC
-99 5 GATAATCATTTTCAATATC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0092 -105 4.9 AATAATCATTTTCAATATC
Proteus mirabilis HI4320 PMI3036 -95 4.6 GGATATGATAATGATTTTC
-89 5.2 GATAATGATTTTCATTAAC
Photorhabdus luminescens subsp. laumondii TTO1 plu0075 -102 4.3 GGTATTGATAAGCATTTCC
Position: -143
Score: 5.1
Sequence: AATAATGATTACTATTCTC
Locus tag: Spro_0586
Spro_0586 -143 5.1 AATAATGATTACTATTCTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yncE
Ortholog function: putative receptor, ATP binding
Escherichia coli str. K-12 substr. MG1655 b1452 -103 4.6 AATAATGATTACCATTCCC
Salmonella typhimurium LT2 STM1586 -103 5.2 AATAATGATTATTATTCTC
Citrobacter koseri ATCC BAA-895 CKO_01494 -202 4.5 AATAATGATTACTATTCGC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01908 -103 4.5 AATAATGATTACTATTCGC
Enterobacter sp. 638 Ent638_2098 -100 4.8 AATAATGATTACTATTCTC
Serratia proteamaculans 568 Spro_0586 -143 4.8 AATAATGATTACTATTCTC
Position: -243
Score: 4.7
Sequence: GATAATGAGAACTAATATC
Locus tag: Spro_0645
Spro_0645 -243 4.7 GATAATGAGAACTAATATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: hmsT
Ortholog function: diguanylate cyclase, involved in hemin storage
Salmonella typhimurium LT2 STM4551 -238 4 GGAATTGATAATGATAACC
-232 5.1 GATAATGATAACCAATATC
Citrobacter koseri ATCC BAA-895 CKO_03428 -234 4.8 GATAATGATAACCAATAGC
Enterobacter sp. 638 Ent638_0528 -237 5.1 GATAATGATAACCAATATC
Erwinia amylovora ATCC 49946 EAM_0564 -224 4.5 ATAAATGATAATGATTACC
-218 4.8 GATAATGATTACCAATAGC
-201 4.3 GCATATGTTAATCATTATC
-195 4.4 GTTAATCATTATCACTTTG
Yersinia pestis KIM y3756 -275 5 gataatgataatcataacc
-269 4.9 gataatcataaccaatatc
Serratia proteamaculans 568 Spro_0645 -243 4.6 GATAATGAGAACTAATATC
Position: -39
Score: 4.9
Sequence: GATATTAGTTCTCATTATC
Locus tag: Spro_0646
Spro_0646 -39 4.9 GATATTAGTTCTCATTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yjjZ
Ortholog function: putative membrane protein
Escherichia coli str. K-12 substr. MG1655 b4567 -60 4.4 GCAAATGATAAAAATTATC
-37 5.2 GATATTGGTTATCATTATC
Salmonella typhimurium LT2 STM4552 -37 5.2 GATATTGGTTATCATTATC
-31 4.2 GGTTATCATTATCAATTCC
Citrobacter koseri ATCC BAA-895 CKO_03427 2 4.9 GCTATTGGTTATCATTATC
8 4.1 GGTTATCATTATCGGTATC
Enterobacter sp. 638 Ent638_0529 -37 5.2 GATATTGGTTATCATTATC
-31 4 GGTTATCATTATCATATTG
Erwinia amylovora ATCC 49946 EAM_0565 -70 4.3 CAAAGTGATAATGATTAAC
-64 4.3 GATAATGATTAACATATGC
-47 4.9 GCTATTGGTAATCATTATC
-41 4.8 GGTAATCATTATCATTTAT
Yersinia pestis KIM y3754 -4 4.9 GATATTGGTTATGATTATC
2 5.2 GGTTATGATTATCATTATC
Serratia proteamaculans 568 Spro_0646 -39 4.7 GATATTAGTTCTCATTATC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0738 -89 5 GATATTAGTTATCATTATC
-83 4.5 AGTTATCATTATCATTTTT
Proteus mirabilis HI4320 PMI2497 -27 5.3 AATAATGAAAATCATTATC
-21 5.2 GAAAATCATTATCATTAAC
Photorhabdus luminescens subsp. laumondii TTO1 plu4253 -92 5.2 GATATTGGTAATCATTATC
-86 4.7 GGTAATCATTATCATTTGT
Position: -63
Score: 4.4
Sequence: GATAACAATAAATATTATT
Position: -45
Score: 4.3
Sequence: TGATATAAGAATCATTCTC
Locus tag: Spro_0922
Spro_0922 -63 4.4 GATAACAATAAATATTATT
-45 4.3 TGATATAAGAATCATTCTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: iucA2
Ortholog function: aerobactin synthetase (subunit alpha)
Yersinia pestis KIM y3380 -63 4.8 GATAATGATAACCACTATT
Yersinia pestis KIM y3381 -63 4.8 GATAATGATAACCACTATT
Serratia proteamaculans 568 Spro_0922 -63 4.2 GATAACAATAAATATTATT
-45 4.1 TGATATAAGAATCATTCTC
Position: -93
Score: 4.5
Sequence: AATAATATTTATTGTTATC
Locus tag: Spro_0923
Spro_0923 -93 4.5 AATAATATTTATTGTTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: Spro_0923
Ortholog function: major facilitator superfamily MFS_1
Serratia proteamaculans 568 Spro_0923 -93 4.3 AATAATATTTATTGTTATC
Position: -52
Score: 4.3
Sequence: GCTAATGAGAGTGATTATC
Locus tag: Spro_1015
Spro_1015 -52 4.3 GCTAATGAGAGTGATTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: Spro_1015
Ortholog function: iron(III) ABC transporter, periplasmic protein
Yersinia pestis KIM y3342 -41 4.2 ACAAACGATTTTGATTATC
-35 4.6 GATTTTGATTATCATTCGC
Serratia proteamaculans 568 Spro_1015 -52 4.3 GCTAATGAGAGTGATTATC
Position: -51
Score: 5
Sequence: TATAATGATTTTCGTTATC
Locus tag: Spro_1288
Spro_1288 -51 5 TATAATGATTTTCGTTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: gpmA
Ortholog function: phosphoglyceromutase 1
Escherichia coli str. K-12 substr. MG1655 b0755 -47 5 TATAATGAGAATTATTATC
-41 4.7 GAGAATTATTATCATTAAA
Salmonella typhimurium LT2 STM0772 -47 5 TATAATGAGAATTATTATC
-41 4.5 GAGAATTATTATCATTACA
Citrobacter koseri ATCC BAA-895 CKO_02381 -46 5 TATAATGAGAATTATTATC
-40 4.5 GAGAATTATTATCATTCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00768 -96 4.6 TATAATGAGAATAGTTATC
Enterobacter sp. 638 Ent638_1246 -164 4.7 TATAATGAGAATTGTTATC
-158 4.1 GAGAATTGTTATCATTCAA
Yersinia pestis KIM y3048 -103 5.3 TATAATGATAATAATTATC
-97 4.6 GATAATAATTATCATTGAA
Serratia proteamaculans 568 Spro_1288 -51 4.9 TATAATGATTTTCGTTATC
Edwardsiella tarda EIB202 ETAE_2569 -49 4.6 CATGATGATAATAATTATC
-43 5.3 GATAATAATTATCATTATA
Position: -68
Score: 5.3
Sequence: GATAATCATTATCAATATT
Locus tag: Spro_1429
Spro_1429 -68 5.3 GATAATCATTATCAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ubiF
Ortholog function: flavoprotein monooxygenase
Erwinia amylovora ATCC 49946 EAM_2094 -51 4.9 GGTAATGATAACCATTAGC
Serratia proteamaculans 568 Spro_1429 -74 5.5 GATATTGATAATCATTATC
-68 5.1 GATAATCATTATCAATATT
Position: -134
Score: 4.2
Sequence: CTTATTATTTATCATTTTC
Locus tag: Spro_1481
Spro_1481 -134 4.2 CTTATTATTTATCATTTTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: dps
Ortholog function: DNA protection ferritin-like protein
Salmonella typhimurium LT2 STM0831 -188 4.4 TAAAATGAGAATTATTACC
-136 4 TTTAATCAAAATAAATATT
Citrobacter koseri ATCC BAA-895 CKO_02310 -188 4.5 GTGAATGAGAATTATTAAC
-137 4.3 TTTAATCATTTTCAATATT
Enterobacter sp. 638 Ent638_1299 -118 4.1 TAACATTATTATCACTATT
Position: -271
Score: 3.9
Sequence: AATAATAAGAATAAATCCT
Position: -114
Score: 4.3
Sequence: CTAAACAATAACCATTATC
Position: -108
Score: 4.8
Sequence: AATAACCATTATCATTTCC
Locus tag: Spro_1844
Spro_1844 -271 3.9 AATAATAAGAATAAATCCT
-114 4.3 CTAAACAATAACCATTATC
-108 4.8 AATAACCATTATCATTTCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: plu3625
Ortholog function: lipoprotein
Serratia proteamaculans 568 Spro_1844 -114 4.1 CTAAACAATAACCATTATC
-108 4.6 AATAACCATTATCATTTCC
Proteus mirabilis HI4320 PMI3448 -95 4 TCAAATGCGAATCATTTTC
Position: -226
Score: 4
Sequence: TCTATTTATTATCATAAAT
Position: -213
Score: 4.1
Sequence: ATAAATAAGAATGATTCGC
Position: -207
Score: 3.4
Sequence: AAGAATGATTCGCTTTTGA
Position: -180
Score: 3.8
Sequence: ATAGATGAAAATAGTTATC
Position: -174
Score: 4.6
Sequence: GAAAATAGTTATCATAATT
Position: -171
Score: 3.8
Sequence: AATAGTTATCATAATTATT
Position: -168
Score: 4.2
Sequence: AGTTATCATAATTATTTAA
Locus tag: Spro_1942
Spro_1942 -226 4 TCTATTTATTATCATAAAT
-213 4.1 ATAAATAAGAATGATTCGC
-207 3.4 AAGAATGATTCGCTTTTGA
-180 3.8 ATAGATGAAAATAGTTATC
-174 4.6 GAAAATAGTTATCATAATT
-171 3.8 AATAGTTATCATAATTATT
-168 4.2 AGTTATCATAATTATTTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ftnA
Ortholog function: ferritin
Escherichia coli str. K-12 substr. MG1655 b1905 -127 3.4 GgTAATGcgttTtATTccC
-121 3 GcgttTtATtccCATTcgt
Salmonella typhimurium LT2 STM1935 -100 4 AATAATTAAATTTAATATT
Citrobacter koseri ATCC BAA-895 CKO_01042 -97 4.3 AATAATTAAATTTATTATT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02402 -161 4 ATAAATTAAAAGCATTCTC
-155 3.8 TAAAAGCATTCTCATTTAT
Enterobacter sp. 638 Ent638_2486 -103 3.7 TATTTTAATAAATAATATC
-97 3.6 AATAAATAATATCTTTATT
Erwinia amylovora ATCC 49946 EAM_2940 -131 4.4 TGGAATGATTATCAATTAC
Yersinia pestis KIM y2524 -93 4.4 AATAATGTGAATGATTATC
-87 4.1 GTGAATGATTATCATGATG
Serratia proteamaculans 568 Spro_1942 -174 4.5 GAAAATAGTTATCATAATT
-168 4 AGTTATCATAATTATTTAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2473 -158 4.6 TTAAATGATAATGAATATC
-152 4.8 GATAATGAATATCAATAGC
Proteus mirabilis HI4320 PMI1007 -184 4.7 GTTAATGATAATCAATTCC
-178 4.1 GATAATCAATTCCATTAAT
Photorhabdus luminescens subsp. laumondii TTO1 plu2689 -147 4.4 TTAAATGAGATTCATTTTC
-141 4.4 GAGATTCATTTTCATTTTT
Position: -41
Score: 5.6
Sequence: GATATTGATAATCATTTTC
Position: -35
Score: 4.8
Sequence: GATAATCATTTTCATTTGA
Locus tag: Spro_2133
Spro_2133 -41 5.6 GATATTGATAATCATTTTC
-35 4.8 GATAATCATTTTCATTTGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: sitA
Ortholog function: iron ABC transporter, periplasmic substrate-binding protein
Salmonella typhimurium LT2 STM2861 -99 4.5 GCAAATAAGAATTATTTTC
-93 4.2 AAGAATTATTTTCATTTAT
Citrobacter koseri ATCC BAA-895 CKO_04090 -84 4.5 GTAAATAAGAATTATTTTC
-78 4.2 AAGAATTATTTTCATTTAT
Citrobacter koseri ATCC BAA-895 CKO_00940 -111 4.1 GATAAAGATAATTTTTCTC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03078 -99 4.5 GCAAATAAGAATTATTTTC
-93 4.2 AAGAATTATTTTCATTTAT
Enterobacter sp. 638 Ent638_1111 -98 4.9 TTTAATGATAATTATTTTC
-92 4.5 GATAATTATTTTCATTTAA
Yersinia pestis KIM y1897 -39 5.2 GGTATTGATAATCATTTTC
-33 4.7 GATAATCATTTTCATTTGT
Serratia proteamaculans 568 Spro_2133 -41 5.4 GATATTGATAATCATTTTC
-35 4.6 GATAATCATTTTCATTTGA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2392 -53 5.1 GATATTGATAATTATTCTC
Proteus mirabilis HI4320 PMI1027 -63 4.2 TGAAATGATATTGATAATC
-57 5.5 GATATTGATAATCATTATC
Photorhabdus luminescens subsp. laumondii TTO1 plu2672 -49 5.2 GATATTGATAATCGTTATC
-43 4.5 GATAATCGTTATCATATAC
Position: -62
Score: 4.7
Sequence: GATAATGATTCTCACTTTG
Locus tag: Spro_2170
Spro_2170 -62 4.7 GATAATGATTCTCACTTTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: hemP
Ortholog function: hemin uptake protein
Escherichia coli str. K-12 substr. MG1655 b1705 -47 4.1 AATATTGATAATAAGAATC
-41 4.6 GATAATAAGAATCATTGTT
Salmonella typhimurium LT2 STM1346 -47 4.5 ATTATTGATAATAATAATC
-41 4.7 GATAATAATAATCATTGTG
Citrobacter koseri ATCC BAA-895 CKO_01729 -50 4.7 AATATTGATAATAATAATC
-44 4.9 GATAATAATAATCATTGTT
Citrobacter koseri ATCC BAA-895 CKO_03737 14 4.1 CTTGATGATAATCATTCTT
20 4.8 GATAATCATTCTTGTTATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02163 -10 4.8 ATTATTGATAATGATTATC
-4 5.1 GATAATGATTATCATTGTT
Enterobacter sp. 638 Ent638_1742 -50 4.2 TTTGTTGATAATGATTATC
-44 5.1 GATAATGATTATCATTGTT
Serratia proteamaculans 568 Spro_2170 -68 4 TCACATGATAATGATTCTC
-62 4.6 GATAATGATTCTCACTTTG
Edwardsiella tarda EIB202 ETAE_1796 -10 4.1 TTATACGATAATGATTATC
-4 5.1 GATAATGATTATCATTAAG
Proteus mirabilis HI4320 PMI1424 -52 5.1 GATAACGATAATGATTATC
-46 5.4 GATAATGATTATCATAATC
-40 4.4 GATTATCATAATCATAACC
Photorhabdus luminescens subsp. laumondii TTO1 plu2631 -54 4.7 TATAACGATAATAATTCTC
-48 4.6 GATAATAATTCTCACTATG
Position: 24
Score: 5
Sequence: AAATATGATAATGATTATC
Position: 30
Score: 5.2
Sequence: GATAATGATTATCATTCAA
Locus tag: Spro_2178
Spro_2178 24 5 AAATATGATAATGATTATC
30 5.2 GATAATGATTATCATTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: EAM_1649
Ortholog function: hypothetical protein
Erwinia amylovora ATCC 49946 EAM_1649 -41 4.7 TAATATGATAATGATTATC
-35 5.5 GATAATGATTATCATTAGC
-29 4 GATTATCATTAGCATAACC
Serratia proteamaculans 568 Spro_2178 24 4.8 AAATATGATAATGATTATC
30 5 GATAATGATTATCATTCAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1858 -43 4.7 TAATATGATAATGATTATC
-37 4.9 GATAATGATTATCATTTCA
Position: -77
Score: 4.4
Sequence: TGAAGTGATAATCGTTATC
Position: -71
Score: 4.8
Sequence: GATAATCGTTATCACTAAC
Locus tag: Spro_2179
Spro_2179 -77 4.4 TGAAGTGATAATCGTTATC
-71 4.8 GATAATCGTTATCACTAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: sufA
Ortholog function: scaffold protein for iron-sulfur cluster assembly
Escherichia coli str. K-12 substr. MG1655 b1684 -65 4.4 TGAACTGATAATCATTATC
-59 5.1 GATAATCATTATCACTAAC
Salmonella typhimurium LT2 STM1369 -66 4.7 TGAAGTGATAATCATTATC
-60 5.1 GATAATCATTATCACTAAC
Citrobacter koseri ATCC BAA-895 CKO_01717 -66 4.7 TGAAGTGATAATCATTATC
-60 5.1 GATAATCATTATCACTAAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02141 -66 4.7 TGAAGTGATAATCATTATC
-60 5.1 GATAATCATTATCACTAAC
Enterobacter sp. 638 Ent638_1760 -67 4.4 TGAAGTGATAATCGTTATC
-61 4.7 GATAATCGTTATCACTAAC
Yersinia pestis KIM y1934 -129 4.5 TGAAGTGATAATTATTATC
-123 4.8 GATAATTATTATCACTACC
Serratia proteamaculans 568 Spro_2179 -77 4.4 TGAAGTGATAATCGTTATC
-71 4.7 GATAATCGTTATCACTAAC
Proteus mirabilis HI4320 PMI1416 -66 4.4 GATAAGGGTTATCATTACC
-60 4 GGTTATCATTACCATTAGA
Photorhabdus luminescens subsp. laumondii TTO1 plu2622 -87 4.4 GATAAAGGTTATCATTACC
-81 4.3 GGTTATCATTACCATTATA
Position: -91
Score: 4.9
Sequence: ATTAATAAAAATTATTATC
Position: -85
Score: 5
Sequence: AAAAATTATTATCATTTGC
Locus tag: Spro_2539
Spro_2539 -91 4.9 ATTAATAAAAATTATTATC
-85 5 AAAAATTATTATCATTTGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: Spro_2539
Ortholog function: iron(III) ABC transporter, binding protein
Serratia proteamaculans 568 Spro_2539 -91 4.7 ATTAATAAAAATTATTATC
-85 4.8 AAAAATTATTATCATTTGC
Position: -330
Score: 4
Sequence: GTTATCAAGAATGATTCTC
Position: -324
Score: 4.3
Sequence: AAGAATGATTCTCAAAAAC
Locus tag: Spro_2704
Spro_2704 -330 4 GTTATCAAGAATGATTCTC
-324 4.3 AAGAATGATTCTCAAAAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: adhE
Ortholog function: iron-containing aldehyde-alcohol dehydrogenase
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02199 -332 4 TTTAATGCTAATCGTTTTT
-326 3.2 GCTAATCGTTTTTTTAATT
Yersinia pestis KIM y2023 -339 5 GATAATGACAATCATTCTC
-333 3.7 GAcAATcATtcTCAaaAaa
Serratia proteamaculans 568 Spro_2704 -330 3.9 GTTATCAAGAATGATTCTC
-324 4.2 AAGAATGATTCTCAAAAAC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2326 -368 4.5 CCTAATGATATTGATTATC
-362 5.2 GATATTGATTATCAATATC
Edwardsiella tarda EIB202 ETAE_1508 -317 4 aAagATGAgAtTCATTcTC
-311 4.3 GAgAtTcATtcTCATTAaa
Proteus mirabilis HI4320 PMI1486 -300 4.5 GTAATTAATTATCATTACC
-294 4 AATTATCATTACCATTTAA
Photorhabdus luminescens subsp. laumondii TTO1 plu2496 -191 3.9 ccaAtcaATAATaATTATC
-185 4.4 AATAATAATTATCACTGAC
Position: -140
Score: 5
Sequence: GATAAAGATAATAATTATC
Position: -134
Score: 5.4
Sequence: GATAATAATTATCATTAAT
Position: -131
Score: 4.1
Sequence: AATAATTATCATTAATATT
Locus tag: Spro_2736
Spro_2736 -140 5 GATAAAGATAATAATTATC
-134 5.4 GATAATAATTATCATTAAT
-131 4.1 AATAATTATCATTAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: foxA
Ortholog function: TonB-dependent siderophore receptor
Salmonella typhimurium LT2 STM0364 -26 4.5 GGTAATAATTCTTATTTAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02304 -98 4.2 AATAATAATTCGCATTACT
Enterobacter sp. 638 Ent638_0493 -45 4.7 GGTAATAATTCTTATTAAC
Erwinia amylovora ATCC 49946 EAM_0358 -123 4.4 AAAAAAGATAATAATTCTC
-117 5 GATAATAATTCTCATTTAC
Serratia proteamaculans 568 Spro_2736 -140 4.9 GATAAAGATAATAATTATC
-134 5.2 GATAATAATTATCATTAAT
Position: -65
Score: 4.7
Sequence: GCAAACAATTCTCATTATC
Locus tag: Spro_2919
Spro_2919 -65 4.7 GCAAACAATTCTCATTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: viuB
Ortholog function: FAD-binding 9 siderophore-interacting domain protein
Serratia proteamaculans 568 Spro_2919 -65 4.5 GCAAACAATTCTCATTATC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2023 -72 4.4 CGAAATGATAATAGTTATC
Proteus mirabilis HI4320 PMI1437 -66 4.6 AATAGTGATAATGACTATC
-60 5 GATAATGACTATCATTATT
Photorhabdus luminescens subsp. laumondii TTO1 plu2040 -97 5 TTTAATGATAATAATTATC
-91 5.5 GATAATAATTATCATTTTC
Position: -150
Score: 4.3
Sequence: GTTAATTAAAATCAATAGT
Position: -96
Score: 4.4
Sequence: GCTAACTATTTTCATTTTT
Locus tag: Spro_2926
Spro_2926 -150 4.3 GTTAATTAAAATCAATAGT
-96 4.4 GCTAACTATTTTCATTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yncD
Ortholog function: TonB-dependent siderophore outer membrane receptor
Salmonella typhimurium LT2 STM1587 -179 5.1 GAGAATAATAATCATTATT
Serratia proteamaculans 568 Spro_2926 -150 4.1 GTTAATTAAAATCAATAGT
-96 4.2 GCTAACTATTTTCATTTTT
Position: -109
Score: 4.9
Sequence: CAGAATGATAATCACTATC
Locus tag: Spro_2929
Spro_2929 -109 4.9 CAGAATGATAATCACTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yijD
Ortholog function: iron permease FTR1
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01045 -76 5 TGTAATGATAATCACTATC
-70 4.2 GATAATCACTATCATAAAT
Enterobacter sp. 638 Ent638_1545 -76 4.9 CGTAATGATAATCACTATC
Erwinia amylovora ATCC 49946 EAM_2059 -80 4.6 GATAATGATAATCCCTATC
Yersinia pestis KIM y2452 -84 4.4 CAGAATGATAATCACAATC
-78 4.3 GATAATCACAATCGTTTTA
Serratia proteamaculans 568 Spro_2929 -109 4.8 CAGAATGATAATCACTATC
Position: -108
Score: 4.4
Sequence: ATGATTGATAAGTATTATC
Position: -102
Score: 4.3
Sequence: GATAAGTATTATCGTTTGC
Locus tag: Spro_3222
Spro_3222 -108 4.4 ATGATTGATAAGTATTATC
-102 4.3 GATAAGTATTATCGTTTGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yiuB
Ortholog function: ferric-enterobactin ABC-transporter, permease component
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00519 -54 4.1 GAGAATAATTCTCAGAATC
Enterobacter sp. 638 Ent638_0575 -131 4.4 TCAATTGATAAGCATTATC
Erwinia amylovora ATCC 49946 EAM_2216 -61 4.5 GATAAGTATTATCATTTGC
-10 4 GGTATTGATAATGAGTTTA
Yersinia pestis KIM y2874 -45 4.3 CTTATTGATAAGTATTATC
-39 4.5 GATAAGTATTATCATTTGC
Serratia proteamaculans 568 Spro_3222 -108 4.2 ATGATTGATAAGTATTATC
-102 4.2 GATAAGTATTATCGTTTGC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3242 -77 4.2 ATATACGATAATAATTATC
-71 4.7 GATAATAATTATCAAACTC
Edwardsiella tarda EIB202 ETAE_1965 -75 4.7 GCTAATAATTTTCATTTAC
-53 4.5 AATATTGATATTGATTAGC
-47 4.8 GATATTGATTAGCGTTATC
Proteus mirabilis HI4320 PMI0229 -96 4.8 GATAATGGTAACTATTATC
-90 4.3 GGTAACTATTATCGTTATA
Photorhabdus luminescens subsp. laumondii TTO1 plu2852 -78 4.3 CATATTGATAAGTATTCTC
-72 4 GATAAGTATTCTCATTTGT
Position: -66
Score: 4.4
Sequence: GCACTTGATAATTATTATC
Position: -60
Score: 5.4
Sequence: GATAATTATTATCATTTAC
Locus tag: Spro_3415
Spro_3415 -66 4.4 GCACTTGATAATTATTATC
-60 5.4 GATAATTATTATCATTTAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: mntH
Ortholog function: Mn2+/Fe2+ transporter, NRAMP family
Escherichia coli str. K-12 substr. MG1655 b2392 -68 4.7 GAATTTGATAATCATTCTC
-62 4.2 GATAATCATTCTCGTTTGG
Salmonella typhimurium LT2 STM2408 -68 4.5 GCACTTGATAATCATTATC
-62 4.8 GATAATCATTATCAATAAA
Citrobacter koseri ATCC BAA-895 CKO_00404 -50 4.3 GCACTTGATAATCATTCTC
-44 4.5 GATAATCATTCTCAATAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02743 -68 4.3 GAACTTGATAATCATTCGC
-62 4.3 GATAATCATTCGCATTTTG
Enterobacter sp. 638 Ent638_2926 -67 4.8 GATCTTGATAATCATTCTC
-61 4.8 GATAATCATTCTCATTTTG
Yersinia pestis KIM y1500 -78 4 GCGCTTGATAATTATTCTC
-72 4.6 GATAATTATTCTCATTTAA
Serratia proteamaculans 568 Spro_3415 -66 4.3 GCACTTGATAATTATTATC
-60 5.2 GATAATTATTATCATTTAC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0843 -63 4.5 GCACTTGATAATCATTATC
-57 5.2 GATAATCATTATCATTTTT
Edwardsiella tarda EIB202 ETAE_1142 -134 4.5 GCAGTTGATAATCATTATC
Position: -56
Score: 5.1
Sequence: ACAAATGATAATCATTATT
Locus tag: Spro_3421
Spro_3421 -56 5.1 ACAAATGATAATCATTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: entC
Ortholog function: isochorismate synthetase, siderophore biosynthesis
Serratia proteamaculans 568 Spro_3421 -56 5 ACAAATGATAATCATTATT
-50 4.1 GATAATCATTATTATACAG
Position: -161
Score: 5.3
Sequence: AATAATGATTATCATTTGT
Locus tag: Spro_3422
Spro_3422 -161 5.3 AATAATGATTATCATTTGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fepB
Ortholog function: ferric enterobactin (enterochelin) binding protein; periplasmic component
Serratia proteamaculans 568 Spro_3422 -167 4.1 CTGTATAATAATGATTATC
-161 5 AATAATGATTATCATTTGT
Position: -112
Score: 4.6
Sequence: ATAAATGAGTTTTATTATC
Position: -106
Score: 4.6
Sequence: GAGTTTTATTATCATTATT
Locus tag: Spro_3423
Spro_3423 -112 4.6 ATAAATGAGTTTTATTATC
-106 4.6 GAGTTTTATTATCATTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ybdA
Ortholog function: enterobactin exporter EntS, MFS family
Escherichia coli str. K-12 substr. MG1655 b0591 -98 4.8 GATAATGAAATTAATTATC
-92 4.9 GAAATTAATTATCGTTATC
Salmonella typhimurium LT2 STM0593 -98 4.9 GATAATGATAGTAATTATC
-92 4.8 GATAGTAATTATCGTTATC
Citrobacter koseri ATCC BAA-895 CKO_02570 -99 4.9 GATAATGATAGTAATTATC
-93 4.8 GATAGTAATTATCGTTATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00609 -94 4.9 GATAATGATAGTAATTATC
-88 4.8 GATAGTAATTATCGTTATC
Enterobacter sp. 638 Ent638_1123 -94 4.9 GATAATGATAGTAATTATC
-88 4.8 GATAGTAATTATCGTTATC
Serratia proteamaculans 568 Spro_3423 -112 4.4 ATAAATGAGTTTTATTATC
-106 4.4 GAGTTTTATTATCATTATT
Position: -48
Score: 4.6
Sequence: AATAATGATAATAAAACTC
Position: -42
Score: 4.6
Sequence: GATAATAAAACTCATTTAT
Locus tag: Spro_3424
Spro_3424 -48 4.6 AATAATGATAATAAAACTC
-42 4.6 GATAATAAAACTCATTTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fepD
Ortholog function: iron-enterobactin (enterochelin) ABC transporter membrane protein
Escherichia coli str. K-12 substr. MG1655 b0590 -37 4.8 GATAACGATAATTAATTTC
-31 4.9 GATAATTAATTTCATTATC
Salmonella typhimurium LT2 STM0592 -37 4.8 GATAACGATAATTACTATC
-31 5 GATAATTACTATCATTATC
Citrobacter koseri ATCC BAA-895 CKO_02571 -37 4.8 GATAACGATAATTACTATC
-31 5 GATAATTACTATCATTATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00608 -43 4.8 GATAACGATAATTACTATC
-37 5 GATAATTACTATCATTATC
Enterobacter sp. 638 Ent638_1122 -30 4.8 GATAACGATAATTACTATC
-24 5 GATAATTACTATCATTATC
Serratia proteamaculans 568 Spro_3424 -48 4.4 AATAATGATAATAAAACTC
-42 4.4 GATAATAAAACTCATTTAT
Position: -260
Score: 4.7
Sequence: ACTATTGATAATTATTTGC
Locus tag: Spro_3430
Spro_3430 -260 4.7 ACTATTGATAATTATTTGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: iroN
Ortholog function: TonB-dependent siderophore receptor
Citrobacter koseri ATCC BAA-895 CKO_01682 -95 5.1 GTAAATGATAATCATTATT
Serratia proteamaculans 568 Spro_3430 -260 4.4 ACTATTGATAATTATTTGC
-254 4.1 GATAATTATTTGCGTTTGC
Position: -64
Score: 5.1
Sequence: ACAAATGATTATCATTAGC
Locus tag: Spro_3468
Spro_3468 -64 5.1 ACAAATGATTATCATTAGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: cjrB
Ortholog function: TonB family protein
Citrobacter koseri ATCC BAA-895 CKO_00040 -104 4.6 GATAATGAGTTTCATTCGC
Serratia proteamaculans 568 Spro_3468 -64 4.9 ACAAATGATTATCATTAGC
Proteus mirabilis HI4320 PMI1550 -75 4.8 GATATTGATAATTATTCTT
-69 4.6 GATAATTATTCTTATTAAT
Photorhabdus luminescens subsp. laumondii TTO1 plu2717 -73 4.7 AAAAATAATTTTCATTAGC
-56 4 GCATATGAAATTAATTATC
-50 4.5 GAAATTAATTATCATTACT
Position: -51
Score: 5.3
Sequence: GCAAATGATAATTATTATC
Locus tag: Spro_3469
Spro_3469 -51 5.3 GCAAATGATAATTATTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: cjrA
Ortholog function: putative lipoprotein of unknown function DUF399
Citrobacter koseri ATCC BAA-895 CKO_00039 -104 4.6 GATAATGAGTTTCATTCGC
Serratia proteamaculans 568 Spro_3469 -51 5.1 GCAAATGATAATTATTATC
-45 4.2 GATAATTATTATCTATAAT
Proteus mirabilis HI4320 PMI1551 -75 4.8 GATATTGATAATTATTCTT
-69 4.6 GATAATTATTCTTATTAAT
Photorhabdus luminescens subsp. laumondii TTO1 plu2718 -45 4.5 GTAAACGATTCTTATTATC
Position: -245
Score: 5.2
Sequence: GATATTGATAATTAATATC
Position: -239
Score: 5
Sequence: GATAATTAATATCAATATC
Locus tag: Spro_3494
Spro_3494 -245 5.2 GATATTGATAATTAATATC
-239 5 GATAATTAATATCAATATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: Ent638_1099
Ortholog function: TonB-dependent siderophore/colicin receptor
Enterobacter sp. 638 Ent638_1099 -62 4.3 GTAAATGATATACATTTTC
-56 4.5 GATATACATTTTCATTATC
-50 4.3 CATTTTCATTATCATTTTT
Serratia proteamaculans 568 Spro_3494 -245 5 GATATTGATAATTAATATC
-239 4.9 GATAATTAATATCAATATC
-105 4 TGTAATGATTTTCATTTCG
Position: -66
Score: 5.1
Sequence: GATATTGATATTAATTATC
Position: -60
Score: 5.3
Sequence: GATATTAATTATCAATATC
Position: -54
Score: 4.7
Sequence: AATTATCAATATCATTAGC
Locus tag: Spro_3495
Spro_3495 -66 5.1 GATATTGATATTAATTATC
-60 5.3 GATATTAATTATCAATATC
-54 4.7 AATTATCAATATCATTAGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: Ent638_1100
Ortholog function: putative receptor
Enterobacter sp. 638 Ent638_1100 -62 4.3 GTAAATGATATACATTTTC
-56 4.5 GATATACATTTTCATTATC
-50 4.3 CATTTTCATTATCATTTTT
Serratia proteamaculans 568 Spro_3495 -66 4.9 GATATTGATATTAATTATC
-60 5.1 GATATTAATTATCAATATC
-54 4.5 AATTATCAATATCATTAGC
Position: -60
Score: 5
Sequence: GCTTATAATAATTATTATC
Position: -54
Score: 4.9
Sequence: AATAATTATTATCGTTTAC
Locus tag: Spro_3979
Spro_3979 -60 5 GCTTATAATAATTATTATC
-54 4.9 AATAATTATTATCGTTTAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fhuA
Ortholog function: TonB-dependent siderophore receptor
Serratia proteamaculans 568 Spro_3979 -60 4.7 GCTTATAATAATTATTATC
-54 4.7 AATAATTATTATCGTTTAC
Position: -94
Score: 4.5
Sequence: AATAATGAGAACTACTATC
Locus tag: Spro_4211
Spro_4211 -94 4.5 AATAATGAGAACTACTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: exbB
Ortholog function: TonB-dependent siderophore transporter component ExbB
Escherichia coli str. K-12 substr. MG1655 b3006 -82 4.1 AGTAATGAGAACGACTATC
Salmonella typhimurium LT2 STM3159 -82 4.1 AGTAATGAGAACGACTATC
Citrobacter koseri ATCC BAA-895 CKO_04401 -97 4.1 AGTAATGAGAACGACTATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03426 -97 4.3 ACTAATGAGAACCACTATC
Enterobacter sp. 638 Ent638_3417 -97 4.3 ACTAATGAGAACCACTATC
Yersinia pestis KIM y3495 -71 4.8 ACTAATGATAATTACTATC
Serratia proteamaculans 568 Spro_4211 -94 4.4 AATAATGAGAACTACTATC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0358 -206 4.3 AATAATGAGAACGACTATC
Proteus mirabilis HI4320 PMI0029 -170 4.8 AGTAATGATAATTACTATC
Photorhabdus luminescens subsp. laumondii TTO1 plu3941 -98 5.1 AATAATGATAATTACTATC
Position: -155
Score: 4.5
Sequence: GAATACGATAATGATTCTC
Position: -149
Score: 5.1
Sequence: GATAATGATTCTCACTATT
Locus tag: Spro_4628
Spro_4628 -155 4.5 GAATACGATAATGATTCTC
-149 5.1 GATAATGATTCTCACTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: feoA
Ortholog function: ferrous iron transport protein A
Escherichia coli str. K-12 substr. MG1655 b3408 -138 3.4 GcTgATagaAAcCATTcTC
-132 4.5 AGAAACCATTCTCATTATC
Salmonella typhimurium LT2 STM3505 -140 3.5 GAagATagaAAcCATTcTC
-133 4.5 AGAAACCATTCTCATTATC
Citrobacter koseri ATCC BAA-895 CKO_04830 -139 4.1 GATGATAAAAACCATTCTC
-133 4.7 AAAAACCATTCTCATTATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03778 -133 4.1 GATGATAAAAACCATTCTC
-127 4.7 AAAAACCATTCTCATTATC
Enterobacter sp. 638 Ent638_3821 -62 4.5 AGAAACCATTCTCATTATC
Yersinia pestis KIM y3912 -118 4.1 GAGCATGAAAATAATTCTC
-112 4.4 GAAAATAATTCTCAGTATT
Serratia proteamaculans 568 Spro_4628 -155 4.3 GAATACGATAATGATTCTC
-149 4.9 GATAATGATTCTCACTATT
Edwardsiella tarda EIB202 ETAE_3283 -163 4.3 GAAAACGATTATCAGTTTT
-157 4.1 GATTATCAGTTTTATTATA
Proteus mirabilis HI4320 PMI2920 -138 4 AAAGATGGTTATAATTCTC
-132 4.3 GGTTATAATTCTCATTTGC
-59 4.8 GTTAATAATTATCAGTATC
-53 4.6 AATTATCAGTATCATTATT
Photorhabdus luminescens subsp. laumondii TTO1 plu0209 -244 4 AATGTTGGTTATTATTCTC
-238 4.2 GGTTATTATTCTCATTTGC
Position: -128
Score: 4.8
Sequence: CGCAATAATAATCATTATC
Position: -122
Score: 5
Sequence: AATAATCATTATCATTCGT
Locus tag: Spro_4654
Spro_4654 -128 4.8 CGCAATAATAATCATTATC
-122 5 AATAATCATTATCATTCGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yhhY
Ortholog function: GCN5-related N-acetyltransferase
Escherichia coli str. K-12 substr. MG1655 b3441 -119 4.9 GACAATAATAATCATTCTC
-113 4.7 AATAATCATTCTCATTCGC
Erwinia amylovora ATCC 49946 EAM_3278 -118 4.9 GGCAATAATAATCATTATC
-112 4.9 AATAATCATTATCATTCGC
Serratia proteamaculans 568 Spro_4654 -128 4.6 CGCAATAATAATCATTATC
-122 4.7 AATAATCATTATCATTCGT
© 2009-2020 RegPrecise