Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of EbgR regulog to Serratia proteamaculans 568

Reference regulog properties
Source regulog: EbgR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Galactosides utilization
Effector: Beta-galactosides
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Serratia proteamaculans 568
Orthologous TF(s) Spro_1972
Regulated genes 3
Built upon 5 sites [see more]
Predicted regulatory interactions in Serratia proteamaculans 568
Locus tag Position Score Sequence
Position: -160
Score: 6.4
Sequence: GTATTTTTTACTAAATATTTT
Locus tag: Spro_1971
Spro_1971 -160 6.4 GTATTTTTTACTAAATATTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ygjJ
Ortholog function: hypothetical protein
Escherichia coli str. K-12 substr. MG1655 b3079 -94 6.2 CTACTTTTTAGTAAAAATTTT
Serratia proteamaculans 568 Spro_1971 -160 6.4 GTATTTTTTACTAAATATTTT
Position: -223
Score: 5.9
Sequence: AAAATATTTAGTAAAAAATAC
Locus tag: Spro_1972
Spro_1972 -223 5.9 AAAATATTTAGTAAAAAATAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ebgR
Ortholog function: Evolved beta-D-galactosidase transcriptional repressor, LacI family
Escherichia coli str. K-12 substr. MG1655 b3075 -201 5.7 TAAAATTTTACTAAACTATAG
Serratia proteamaculans 568 Spro_1972 -223 5.9 AAAATATTTAGTAAAAAATAC
Position: -59
Score: 6.2
Sequence: GTGAATTTTACTAAATATTTA
Locus tag: Spro_1973
Spro_1973 -59 6.2 GTGAATTTTACTAAATATTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ebgA
Ortholog function: Evolved beta-D-galactosidase, alpha subunit
Escherichia coli str. K-12 substr. MG1655 b3076 -94 6.2 CTACTTTTTAGTAAAAATTTT
Serratia proteamaculans 568 Spro_1973 -59 6.2 GTGAATTTTACTAAATATTTA
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