Propagation of PurR regulog to Yersinia pestis biovar Antiqua str. E1979001
| Source regulog: | PurR - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Purine metabolism |
| Effector: | Hypoxanthine; Guanine |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Yersinia pestis biovar Antiqua str. E1979001 |
| Orthologous TF(s) | YpE1979001_4072 |
| Regulated genes | 18 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -74
Score: 5.9 Sequence: ACGCAAACGTTTTCTT
Locus tag: YpE1979001_1329
|
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| YpE1979001_1329 | -74 | 5.9 | ACGCAAACGTTTTCTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cvpA | ||||
| Ortholog function: membrane protein required for colicin V production | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2313 | -72 | 5.9 | ACGCAAACGTTTTCTT |
| Salmonella typhimurium LT2 | STM2363 | -72 | 5.9 | ACGCAAACGTTTTCTT |
| Citrobacter koseri ATCC BAA-895 | CKO_00473 | -72 | 5.9 | ACGCAAACGTTTTCTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02703 | -71 | 5.9 | ACGCAAACGTTTTCTT |
| Enterobacter sp. 638 | Ent638_2862 | -72 | 5.9 | ACGCAAACGTTTTCTT |
| Erwinia amylovora ATCC 49946 | EAM_2319 | -92 | 5.9 | ACGCAAACGTTTTCTT |
| Yersinia pestis KIM | y1604 | -74 | 5.9 | ACGCAAACGTTTTCTT |
| Serratia proteamaculans 568 | Spro_3329 | -74 | 6 | ACGCAAACGTTTACGT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3053 | -90 | 5.9 | ACGCAAACGTTTTCTT |
| Proteus mirabilis HI4320 | PMI1784 | -71 | 6 | ACGCAAACGTTTTCGT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3168 | -72 | 6 | ACGCAAACGTTTTCGT |
|
Position: -155
Score: 3.8 Sequence: GGGCAGTCGCTTTCGA
Locus tag: YpE1979001_1383
|
||||
| YpE1979001_1383 | -155 | 3.8 | GGGCAGTCGCTTTCGA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: folD | ||||
| Ortholog function: 5,10-methylene-tetrahydrofolate dehydrogenase | ||||
| Salmonella typhimurium LT2 | STM0542 | -89 | 4.3 | ACACAAACGTTAACTG |
| Citrobacter koseri ATCC BAA-895 | CKO_02629 | -89 | 4.6 | ACGCAAACGATAACTG |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00484 | -88 | 3.7 | CAGCAAACGAGGACTG |
| Yersinia pestis KIM | y1110 | -155 | 3.8 | GGGCAGTCGCTTTCGA |
| Proteus mirabilis HI4320 | PMI2155 | 21 | 4.1 | GGGAAAACGATTGCGC |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4317 | 21 | 4.1 | GGGAAAACGATTGCGC |
|
Position: -242
Score: 4.9 Sequence: TCGCAAACGTTTGCCT
Locus tag: YpE1979001_1387
|
||||
| YpE1979001_1387 | -242 | 4.9 | TCGCAAACGTTTGCCT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: purM | ||||
| Ortholog function: phosphoribosylformylglycinamidine cyclo-ligase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2499 | -79 | 5.1 | TCGCAAACGTTTGCTT |
| Salmonella typhimurium LT2 | STM2499.S | -63 | 5.1 | TCGCAAACGTTTGCTT |
| Citrobacter koseri ATCC BAA-895 | CKO_00291 | -299 | 5.1 | TCGCAAACGTTTGCTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02824 | -74 | 5.1 | TCGCAAACGTTTGCTT |
| Enterobacter sp. 638 | Ent638_2988 | -79 | 4.9 | TCGCAAACGTTTGCCT |
| Erwinia amylovora ATCC 49946 | EAM_2441 | -84 | 5.1 | TCGCAAACGTTTGCTT |
| Yersinia pestis KIM | y1407 | -242 | 4.9 | TCGCAAACGTTTGCCT |
| Serratia proteamaculans 568 | Spro_3524 | -59 | 4.9 | TCGCAAACGTTTGCCT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1254 | -129 | 4.6 | TCGCAAACGATTGCCT |
| Edwardsiella tarda EIB202 | ETAE_1086 | -116 | 4.9 | TAGCAAACGTTTGCTT |
| Proteus mirabilis HI4320 | PMI1575 | -79 | 5.1 | TCGCAAACGTTTGCTT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2760 | -80 | 5.1 | TCGCAAACGTTTGCTT |
|
Position: 7
Score: 5.2 Sequence: AGGCAATCGATTACGC
Locus tag: YpE1979001_1424
|
||||
| YpE1979001_1424 | 7 | 5.2 | AGGCAATCGATTACGC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: guaB | ||||
| Ortholog function: inosine-5'-monophosphate dehydrogenase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2508 | -69 | 5.2 | ATGCAATCGGTTACGC |
| Salmonella typhimurium LT2 | STM2511 | -68 | 5.3 | ATGCAACCGATTACGT |
| Citrobacter koseri ATCC BAA-895 | CKO_00279 | -69 | 5.3 | ATGCAATCGGTTTCGC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02834 | -66 | 5.2 | ATGCAATCGGTTACGC |
| Enterobacter sp. 638 | Ent638_2999 | -67 | 5.2 | ATGCAATCGGTTACGC |
| Erwinia amylovora ATCC 49946 | EAM_2465 | -78 | 4.9 | AGGCAATCGATTACGG |
| Yersinia pestis KIM | y1362 | 6 | 5.2 | AGGCAATCGATTACGC |
| Serratia proteamaculans 568 | Spro_3596 | -78 | 5.1 | AGGCAACCGATTACGC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3209 | -79 | 5.2 | AGGCAATCGATTACGC |
| Edwardsiella tarda EIB202 | ETAE_2787 | -79 | 5 | AGGCAACCGGTTTCGG |
| Proteus mirabilis HI4320 | PMI1546 | -77 | 4.9 | AAGCAACCGATTACGG |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2713 | -80 | 5.3 | AGGCAACCGATTACGT |
|
Position: -130
Score: 5.9 Sequence: ACGCAAACGGTTTCGT
Locus tag: YpE1979001_1463
|
||||
| YpE1979001_1463 | -130 | 5.9 | ACGCAAACGGTTTCGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: purL | ||||
| Ortholog function: phosphoribosylformylglycinamidine synthase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2557 | -92 | 5.9 | ACGCAAACGGTTTCGT |
| Salmonella typhimurium LT2 | STM2565 | -90 | 5.9 | ACGCAAACGGTTTCGT |
| Citrobacter koseri ATCC BAA-895 | CKO_00226 | 29 | 5.9 | ACGCAAACGGTTTCGT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02882 | -91 | 5.9 | ACGCAAACGGTTTCGT |
| Enterobacter sp. 638 | Ent638_3042 | -101 | 5.9 | ACGCAAACGGTTTCGT |
| Erwinia amylovora ATCC 49946 | EAM_2502 | -104 | 5.6 | GCGCAAACGGTTTCGT |
| Yersinia pestis KIM | y1309 | -130 | 5.9 | ACGCAAACGGTTTCGT |
| Serratia proteamaculans 568 | Spro_3654 | -113 | 5.9 | ACGCAAACGGTTTCGT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3258 | -113 | 5.9 | ACGCAAACGGTTTCGT |
| Edwardsiella tarda EIB202 | ETAE_0774 | -116 | 5.9 | ACGCAAACGGTTTCGT |
| Proteus mirabilis HI4320 | PMI1875 | -98 | 5.9 | ACGCAAACGGTTTCGT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3317 | -91 | 5.9 | ACGCAAACGGTTTCGT |
|
Position: -323
Score: 4.5 Sequence: AGCCAATCGTTTGCGT
Locus tag: YpE1979001_1476
|
||||
| YpE1979001_1476 | -323 | 4.5 | AGCCAATCGTTTGCGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glyA | ||||
| Ortholog function: serine/glycine hydroxymethyltransferase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2551 | -134 | 4.5 | AGGTAATCGTTTGCGT |
| Salmonella typhimurium LT2 | STM2555 | -132 | 4.5 | AGGTAATCGTTTGCGT |
| Citrobacter koseri ATCC BAA-895 | CKO_00237 | -126 | 4.5 | AGGTAATCGTTTGCGT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02876 | -133 | 4.5 | AGCCAATCGTTTGCGT |
| Enterobacter sp. 638 | Ent638_3036 | -131 | 4.7 | AGGTAAACGTTTGCGT |
| Erwinia amylovora ATCC 49946 | EAM_2497 | -129 | 4.5 | AGCCAATCGTTTGCGT |
| Yersinia pestis KIM | y1322 | -324 | 4.5 | AGCCAATCGTTTGCGT |
| Serratia proteamaculans 568 | Spro_3638 | -135 | 4 | TGCCAATCGTTTGCGT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3250 | -152 | 3.8 | AGCTAATCGTTTGCGT |
| Edwardsiella tarda EIB202 | ETAE_2821 | -147 | 4 | TGCCAAACGATTGCGT |
| Proteus mirabilis HI4320 | PMI1867 | -128 | 4.7 | TAGCAAACGATTGCGT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3291 | -126 | 5.2 | ATGCAATCGTTTGCGT |
|
Position: -213
Score: 5.1 Sequence: TCGCAACCGTTTACTC
Locus tag: YpE1979001_3113
|
||||
| YpE1979001_3113 | -213 | 5.1 | TCGCAACCGTTTACTC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: carA | ||||
| Ortholog function: carbamoyl-phosphate synthase small subunit | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0032 | -236 | 4.9 | GCGCAAGCGTTTTCCA |
| Salmonella typhimurium LT2 | STM0066 | -236 | 5.1 | GCGCAAGCGTTTTCTA |
| Citrobacter koseri ATCC BAA-895 | CKO_03351 | -209 | 5.1 | ACGCAAGCGTTTTCCA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00040 | -208 | 5 | CCGCAAGCGTTTTCTC |
| Enterobacter sp. 638 | Ent638_0591 | -235 | 4.7 | GTACAAACGTTTTCCT |
| Erwinia amylovora ATCC 49946 | EAM_0660 | -239 | 3.9 | AGACAACCGATTTTAT |
| Yersinia pestis KIM | y3693 | -213 | 5.1 | TCGCAACCGTTTACTC |
| Serratia proteamaculans 568 | Spro_0713 | -240 | 4.7 | CCGCAACCGTTTACCA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3871 | -239 | 5 | TAGCAACCGTTTACTT |
| Proteus mirabilis HI4320 | PMI0020 | -240 | 4.5 | AAGCAAACGGTTAAAT |
|
Position: -254
Score: 5.4 Sequence: TCGCAAACGTTTACTT
Locus tag: YpE1979001_3316
|
||||
| YpE1979001_3316 | -254 | 5.4 | TCGCAAACGTTTACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pyrD | ||||
| Ortholog function: dihydroorotate dehydrogenase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0945 | -102 | 4.2 | CGGAAAACGTTTGCGT |
| Salmonella typhimurium LT2 | STM1058 | -101 | 4 | AGGAAAACGATTGCTA |
| Citrobacter koseri ATCC BAA-895 | CKO_02123 | -101 | 4 | AGGAAAACGATTGCTA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00974 | -111 | 4.4 | AGGTAATCGTTTGCGC |
| Enterobacter sp. 638 | Ent638_1457 | -110 | 4.3 | AGGAAAACGATTGCGC |
| Erwinia amylovora ATCC 49946 | EAM_1366 | -101 | 3.8 | AAATAAACGTTTTTTA |
| Yersinia pestis KIM | y2755 | -254 | 5.4 | TCGCAAACGTTTACTT |
| Serratia proteamaculans 568 | Spro_1740 | -110 | 4.2 | GGGAAAACGATTGCGT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2538 | -126 | 4.7 | CCGCAAACGTTTTACT |
| Edwardsiella tarda EIB202 | ETAE_1248 | -108 | 3.9 | AGTAAAACGTTTGCTT |
| Proteus mirabilis HI4320 | PMI0771 | -102 | 4.2 | ATTGAAACGTTTACTT |
|
Position: -104
Score: 4 Sequence: GAGCAAAAGGTATCGT
Position: -98
Score: 3.8 Sequence: AAGGTATCGTTTGCGT
Locus tag: YpE1979001_3457
|
||||
| YpE1979001_3457 | -104 | 4 | GAGCAAAAGGTATCGT | |
| -98 | 3.8 | AAGGTATCGTTTGCGT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gcvT | ||||
| Ortholog function: Glycine cleavage system, aminomethyltransferase (EC 2.1.2.10) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2905 | -106 | 3.8 | AAGAGAACGATTGCGT |
| Salmonella typhimurium LT2 | STM3055 | -108 | 4 | AAGAGAACGTTTGCGT |
| Citrobacter koseri ATCC BAA-895 | CKO_04269 | -106 | 4 | AAGAGAACGTTTGCGT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03341 | -107 | 4 | AAGAGAACGTTTGCGT |
| Enterobacter sp. 638 | Ent638_3324 | -104 | 4 | AAGAGAACGTTTGCGT |
| Erwinia amylovora ATCC 49946 | EAM_2791 | -74 | 4 | AGGGTAACGTTTGCGT |
| Yersinia pestis KIM | y3294 | -104 | 4 | GAGCAAAAGGTATCGT |
| -98 | 3.8 | AAGGTATCGTTTGCGT | ||
| Serratia proteamaculans 568 | Spro_3916 | -163 | 3.8 | AAGGTATCGTTTGCGT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3598 | -108 | 3.8 | AAGATATCGTTTGCGT |
|
Position: -112
Score: 4.4 Sequence: AGGCAATCGTTTGTAT
Locus tag: YpE1979001_3464
|
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| YpE1979001_3464 | -112 | 4.4 | AGGCAATCGTTTGTAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: serA | ||||
| Ortholog function: D-3-phosphoglycerate dehydrogenase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2913 | -95 | 4.5 | ACGCAAACGTTCATAT |
| Salmonella typhimurium LT2 | STM3062 | -102 | 4.2 | GCGCAAACGTTCATAT |
| Citrobacter koseri ATCC BAA-895 | CKO_04278 | -105 | 4.5 | ACGCAAACGTTCATAT |
| -87 | 4.3 | CCGCAATAGTTTTTTT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03348 | -99 | 4.5 | ACGCAAACGTTCATAT |
| Enterobacter sp. 638 | Ent638_3332 | -100 | 4.5 | ACGCAAACGTTCATAT |
| Erwinia amylovora ATCC 49946 | EAM_2798 | -213 | 4.8 | AGGCAATCGTTTTTAT |
| Yersinia pestis KIM | y3301 | 9 | 4.4 | AGGCAATCGTTTGTAT |
| Serratia proteamaculans 568 | Spro_3923 | -99 | 4.1 | GGGCAATCGTTTGTAT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3905 | -98 | 4.4 | AAGCAATCGTTTGTAT |
| Proteus mirabilis HI4320 | PMI2031 | -94 | 4 | GTGCAATCGGTTGTAT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3605 | -91 | 4.3 | TAGCAATCGTTTATAT |
|
Position: -62
Score: 4.3 Sequence: AGGCAAACGATTAACA
Locus tag: YpE1979001_4072
|
||||
| YpE1979001_4072 | -62 | 4.3 | AGGCAAACGATTAACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: purR | ||||
| Ortholog function: purine nucleotide synthesis repressor | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1658 | -60 | 5.4 | AGGCAAACGTTTACCT |
| 28 | 4.4 | GAGCAAACGTTTCCAC | ||
| Salmonella typhimurium LT2 | STM1430 | -58 | 5.4 | AGGCAAACGTTTACCT |
| 28 | 4.3 | GGGCAAACGTTTCCAC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_01672 | -60 | 5.6 | AGGCAAACGTTTACTT |
| 28 | 4.4 | GAGCAAACGTTTCCAC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01996 | -59 | 5.7 | AGGCAAACGTTTACGT |
| 28 | 4.6 | GCGCAAACGTTTCCAC | ||
| Enterobacter sp. 638 | Ent638_1789 | -60 | 5.4 | AGGCAAACGTTTACCT |
| 28 | 4.6 | GCGCAAACGTTTCCAC | ||
| Erwinia amylovora ATCC 49946 | EAM_1663 | -62 | 4.3 | AGGCAAACGATTAACA |
| Yersinia pestis KIM | y1950 | -62 | 4.3 | AGGCAAACGATTAACA |
| Serratia proteamaculans 568 | Spro_2195 | -62 | 4.3 | AGGCAAACGATTAACA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1925 | -60 | 4.3 | AGGCAAACGATTAACA |
| Edwardsiella tarda EIB202 | ETAE_1674 | -57 | 4.3 | AGGCAAACGATTAACA |
|
Position: -85
Score: 5.9 Sequence: ACGCAATCGTTTTCGT
Locus tag: YpE1979001_4299
|
||||
| YpE1979001_4299 | -85 | 5.9 | ACGCAATCGTTTTCGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: purT | ||||
| Ortholog function: phosphoribosylglycinamide formyltransferase 2 | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1849 | -53 | 6 | ACGCAAACGTTTTCGT |
| Salmonella typhimurium LT2 | STM1883 | -51 | 6 | ACGCAAACGTTTTCGT |
| Citrobacter koseri ATCC BAA-895 | CKO_01117 | -52 | 6 | ACGCAAACGTTTTCGT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02364 | -56 | 6 | ACGCAAACGTTTTCGT |
| Enterobacter sp. 638 | Ent638_2418 | -49 | 6 | ACGCAAACGTTTTCGT |
| Erwinia amylovora ATCC 49946 | EAM_1994 | -58 | 6 | ACGCAAACGTTTTCGT |
| Yersinia pestis KIM | y2533 | -85 | 5.9 | ACGCAATCGTTTTCGT |
| Serratia proteamaculans 568 | Spro_2805 | -74 | 6 | ACGCAAACGTTTTCGT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2477 | -59 | 6 | ACGCAAACGTTTTCGT |
| Edwardsiella tarda EIB202 | ETAE_1838 | -107 | 5.9 | ACGCAAACGGTTTCGT |
| Proteus mirabilis HI4320 | PMI2187 | -50 | 5.4 | ATGCAAACGTTTGCGT |
|
Position: -116
Score: 5.5 Sequence: ACGCAACCGTTTTCCT
Locus tag: YpE1979001_0817
|
||||
| YpE1979001_0817 | -116 | 5.5 | ACGCAACCGTTTTCCT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: purE | ||||
| Ortholog function: phosphoribosylaminoimidazole carboxylase catalytic subunit | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0523 | -87 | 5.5 | ACGCAACCGTTTTCCT |
| Salmonella typhimurium LT2 | STM0534 | -87 | 5.5 | ACGCAACCGTTTTCCT |
| Citrobacter koseri ATCC BAA-895 | CKO_02635 | -87 | 5.5 | ACGCAACCGTTTTCCT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00478 | -88 | 5.5 | ACGCAACCGTTTTCCT |
| Enterobacter sp. 638 | Ent638_0977 | -86 | 5.5 | ACGCAACCGTTTTCCT |
| Erwinia amylovora ATCC 49946 | EAM_1060 | -111 | 5.5 | ACGCAACCGTTTTCCT |
| Yersinia pestis KIM | y1103 | -116 | 5.5 | ACGCAACCGTTTTCCT |
| Serratia proteamaculans 568 | Spro_1163 | -108 | 5.5 | ACGCAACCGTTTTCCT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3156 | -130 | 5.5 | ACGCAACCGTTTTCCT |
| Edwardsiella tarda EIB202 | ETAE_2700 | -114 | 5.7 | ACGCAAACGTTTTCCT |
| Proteus mirabilis HI4320 | PMI2161 | -91 | 5.7 | ACGCAAACGTTTTCCT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3807 | -99 | 5.5 | ACGCAATCGTTTTCCT |
|
Position: -322
Score: 4.1 Sequence: AGGTAATCGTTTGCTA
Locus tag: YpE1979001_4549
|
||||
| YpE1979001_4549 | -322 | 4.1 | AGGTAATCGTTTGCTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pyrB | ||||
| Ortholog function: aspartate carbamoyltransferase catalytic subunit | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4245 | -92 | 3.7 | AATAAACCGTTTGCGC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04657 | -227 | 5.1 | AGGCAAACGATTACCT |
| Enterobacter sp. 638 | Ent638_0447 | -137 | 3.9 | GCTCAAGCGTGTTCGA |
| Erwinia amylovora ATCC 49946 | EAM_3054 | -285 | 4.5 | AAGCAAACGATCACCT |
| Yersinia pestis KIM | y0161 | -322 | 4.1 | AGGTAATCGTTTGCTA |
| Serratia proteamaculans 568 | Spro_0545 | -268 | 4 | AGCCAATCGATTGCGA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0382 | -289 | 4.7 | AAGCAACCGATTGCGA |
| Edwardsiella tarda EIB202 | ETAE_3125 | -322 | 4.1 | GGGTAACCGTTTGCGC |
| Proteus mirabilis HI4320 | PMI3455 | -235 | 4.8 | AAGCAAACGCTTGCGT |
|
Position: -69
Score: 5.1 Sequence: GCGCAAACGATTGCTT
Locus tag: YpE1979001_3596
|
||||
| YpE1979001_3596 | -69 | 5.1 | GCGCAAACGATTGCTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: xanP | ||||
| Ortholog function: xanthine/uracil permease, NCS2 family | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3654 | -68 | 4.8 | TGGCAAACGTTTGCTT |
| 30 | 4.9 | GCGCAACCGGTTGCGC | ||
| Salmonella typhimurium LT2 | STM3747 | -68 | 4.9 | TCGCAATCGTTTGCTT |
| 30 | 4.9 | GCGCAACCGGTTGCGC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_05111 | -53 | 5.1 | ATGCAATCGTTTGCTT |
| 45 | 4.9 | GCGCAACCGGTTGCGC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04013 | -68 | 4.8 | TGGCAAACGTTTGCTT |
| 30 | 4.9 | GCGCAACCGGTTGCGC | ||
| Enterobacter sp. 638 | Ent638_0073 | -68 | 4.9 | TCGCAACCGTTTGCTT |
| 30 | 4.8 | GCGCAACCGATTGCGC | ||
| Erwinia amylovora ATCC 49946 | EAM_0040 | -69 | 4.6 | TAGCAAACGATTGCTT |
| Yersinia pestis KIM | y0107 | -18 | 5.1 | GCGCAAACGATTGCTT |
| Serratia proteamaculans 568 | Spro_4873 | -70 | 5.1 | GCGCAACCGTTTGCTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0035 | -74 | 4.9 | TAGCAAACGTTTGCTT |
| Edwardsiella tarda EIB202 | ETAE_0025 | -70 | 5.3 | ACGCAAACGATTGCTT |
| Proteus mirabilis HI4320 | PMI2868 | -68 | 5.3 | ACGCAAACGATTGCTT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0247 | -68 | 5.3 | ACGCAAACGATTGCTT |
|
Position: -129
Score: 3.6 Sequence: CCTTAATCGTTTGCGT
Position: -90
Score: 3.8 Sequence: GCGCAAACGCGTATTA
Locus tag: YpE1979001_1223
|
||||
| YpE1979001_1223 | -129 | 3.6 | CCTTAATCGTTTGCGT | |
| -90 | 3.8 | GCGCAAACGCGTATTA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yhhQ | ||||
| Ortholog function: conserved inner membrane protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3471 | -159 | 3.7 | AGGTTAACGATTGCGT |
| Salmonella typhimurium LT2 | STM3579 | -108 | 3.7 | AGGTTAACGATTGCGT |
| Citrobacter koseri ATCC BAA-895 | CKO_04901 | -109 | 3.8 | AAGTTAACGATTGCGT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03837 | -147 | 3.8 | AGGTTAACGTTTGCGC |
| -93 | 3.7 | ATGCAGCCGTTTTTAA | ||
| Enterobacter sp. 638 | Ent638_3878 | -160 | 3.7 | AGGTTAACGATTGCGT |
| Erwinia amylovora ATCC 49946 | EAM_3301 | -164 | 3.8 | GTCCAAAAGATTTCGC |
| Yersinia pestis KIM | y0408 | -90 | 3.8 | GCGCAAACGCGTATTA |
| Serratia proteamaculans 568 | Spro_0204 | -257 | 4 | GCGTTAACGTTTGCGT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4354 | -150 | 4.1 | ACGACAACGTTTGCGC |
| Edwardsiella tarda EIB202 | ETAE_0019 | -127 | 3.8 | GCGTTAACGATTGCGT |
| Proteus mirabilis HI4320 | PMI3596 | -53 | 3.8 | AATCATACGTTTTATT |
|
Position: -73
Score: 5 Sequence: ACGGAAACGATTACGT
Locus tag: YpE1979001_4474
|
||||
| YpE1979001_4474 | -73 | 5 | ACGGAAACGATTACGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yjcD | ||||
| Ortholog function: putative xanthine/uracil permease | ||||
| Yersinia pestis KIM | y0239 | -73 | 5 | ACGGAAACGATTACGT |
|
Position: -156
Score: 5.7 Sequence: ACGCAATCGTTTTCGC
Locus tag: YpE1979001_2409
|
||||
| YpE1979001_2409 | -156 | 5.7 | ACGCAATCGTTTTCGC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: purH | ||||
| Ortholog function: phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4006 | -123 | 5.8 | GCGCAAACGTTTTCGT |
| Salmonella typhimurium LT2 | STM4176 | -123 | 5.8 | GCGCAAACGTTTTCGT |
| Citrobacter koseri ATCC BAA-895 | CKO_02983 | -123 | 5.8 | GCGCAAACGTTTTCGT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04388 | -126 | 5.8 | GCGCAAACGTTTTCGT |
| Enterobacter sp. 638 | Ent638_0216 | -60 | 5.8 | GCGCAAACGTTTTCGT |
| Erwinia amylovora ATCC 49946 | EAM_0249 | -144 | 5.7 | GCGCAAACGTTTTCGC |
| Yersinia pestis KIM | y0502 | -111 | 5.7 | ACGCAATCGTTTTCGC |
| Serratia proteamaculans 568 | Spro_0293 | -179 | 5.9 | ACGCAAACGTTTTCGC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0241 | -159 | 5.9 | ACGCAAACGTTTTCGC |
| Edwardsiella tarda EIB202 | ETAE_0186 | -116 | 6 | ACGCAAACGTTTTCGT |
| Proteus mirabilis HI4320 | PMI2768 | -155 | 5.6 | ACGCAAACGTTTGCGT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0495 | -283 | 6 | ACGCAAACGTTTTCGT |