Propagation of PurR regulog to Shigella flexneri 2a str. 2457T
Source regulog: | PurR - Enterobacteriales |
Regulator type: | Transcription factor |
Regulator family: | LacI |
Regulation mode: | repressor |
Biological process: | Purine metabolism |
Effector: | Hypoxanthine; Guanine |
Phylum: | Proteobacteria/gamma |
Propagated regulon: | |
Target genome | Shigella flexneri 2a str. 2457T |
Orthologous TF(s) | S1818 |
Regulated genes | 24 |
Locus tag | Position | Score | Sequence | |
---|---|---|---|---|
Position: -236
Score: 4.9 Sequence: GCGCAAGCGTTTTCCA
Locus tag: S0031
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S0031 | -236 | 4.9 | GCGCAAGCGTTTTCCA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: carA | ||||
Ortholog function: carbamoyl-phosphate synthase small subunit | ||||
Escherichia coli str. K-12 substr. MG1655 | b0032 | -236 | 4.9 | GCGCAAGCGTTTTCCA |
Salmonella typhimurium LT2 | STM0066 | -236 | 5.1 | GCGCAAGCGTTTTCTA |
Citrobacter koseri ATCC BAA-895 | CKO_03351 | -209 | 5.1 | ACGCAAGCGTTTTCCA |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00040 | -208 | 5 | CCGCAAGCGTTTTCTC |
Enterobacter sp. 638 | Ent638_0591 | -235 | 4.7 | GTACAAACGTTTTCCT |
Erwinia amylovora ATCC 49946 | EAM_0660 | -239 | 3.9 | AGACAACCGATTTTAT |
Yersinia pestis KIM | y3693 | -213 | 5.1 | TCGCAACCGTTTACTC |
Serratia proteamaculans 568 | Spro_0713 | -240 | 4.7 | CCGCAACCGTTTACCA |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3871 | -239 | 5 | TAGCAACCGTTTACTT |
Proteus mirabilis HI4320 | PMI0020 | -240 | 4.5 | AAGCAAACGGTTAAAT |
Position: -154
Score: 5.6 Sequence: ACGCAATCGATTACGT
Locus tag: S0356
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S0356 | -154 | 5.6 | ACGCAATCGATTACGT | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: tsx | ||||
Ortholog function: nucleoside-specific channel-forming protein | ||||
Escherichia coli str. K-12 substr. MG1655 | b0411 | -154 | 5.6 | ACGCAATCGATTACGT |
Salmonella typhimurium LT2 | STM0413 | -166 | 4.4 | GCGCAAACGTGAACGC |
-154 | 5.6 | ACGCAATCGATTACGT | ||
Citrobacter koseri ATCC BAA-895 | CKO_02750 | -168 | 4.6 | ACGCAAACGTGAACGC |
-156 | 5.6 | ACGCAATCGATTACGT | ||
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00363 | -156 | 5.4 | ACGCAATCGATTACGC |
Enterobacter sp. 638 | Ent638_0879 | -161 | 4.6 | ACGCAAACGTGAACGC |
-149 | 5.6 | ACGCAATCGATTACGT | ||
Erwinia amylovora ATCC 49946 | EAM_2589 | -290 | 5.1 | AGGCAATCGTTTACCC |
Serratia proteamaculans 568 | Spro_2072 | -181 | 5.2 | ACGCAATCGATTACCT |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3796 | -129 | 5.6 | AGGCAACCGTTTTCGT |
Edwardsiella tarda EIB202 | ETAE_2935 | -184 | 5.4 | ACGCAATCGATTACGC |
Position: -87
Score: 5.5 Sequence: ACGCAACCGTTTTCCT
Locus tag: S0462
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S0462 | -87 | 5.5 | ACGCAACCGTTTTCCT | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: purE | ||||
Ortholog function: phosphoribosylaminoimidazole carboxylase catalytic subunit | ||||
Escherichia coli str. K-12 substr. MG1655 | b0523 | -87 | 5.5 | ACGCAACCGTTTTCCT |
Salmonella typhimurium LT2 | STM0534 | -87 | 5.5 | ACGCAACCGTTTTCCT |
Citrobacter koseri ATCC BAA-895 | CKO_02635 | -87 | 5.5 | ACGCAACCGTTTTCCT |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00478 | -88 | 5.5 | ACGCAACCGTTTTCCT |
Enterobacter sp. 638 | Ent638_0977 | -86 | 5.5 | ACGCAACCGTTTTCCT |
Erwinia amylovora ATCC 49946 | EAM_1060 | -111 | 5.5 | ACGCAACCGTTTTCCT |
Yersinia pestis KIM | y1103 | -116 | 5.5 | ACGCAACCGTTTTCCT |
Serratia proteamaculans 568 | Spro_1163 | -108 | 5.5 | ACGCAACCGTTTTCCT |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3156 | -130 | 5.5 | ACGCAACCGTTTTCCT |
Edwardsiella tarda EIB202 | ETAE_2700 | -114 | 5.7 | ACGCAAACGTTTTCCT |
Proteus mirabilis HI4320 | PMI2161 | -91 | 5.7 | ACGCAAACGTTTTCCT |
Photorhabdus luminescens subsp. laumondii TTO1 | plu3807 | -99 | 5.5 | ACGCAATCGTTTTCCT |
Position: -103
Score: 4.2 Sequence: CTGAAAACGTTTGCGT
Locus tag: S1011
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S1011 | -103 | 4.2 | CTGAAAACGTTTGCGT | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: pyrD | ||||
Ortholog function: dihydroorotate dehydrogenase | ||||
Escherichia coli str. K-12 substr. MG1655 | b0945 | -102 | 4.2 | CGGAAAACGTTTGCGT |
Salmonella typhimurium LT2 | STM1058 | -101 | 4 | AGGAAAACGATTGCTA |
Citrobacter koseri ATCC BAA-895 | CKO_02123 | -101 | 4 | AGGAAAACGATTGCTA |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00974 | -111 | 4.4 | AGGTAATCGTTTGCGC |
Enterobacter sp. 638 | Ent638_1457 | -110 | 4.3 | AGGAAAACGATTGCGC |
Erwinia amylovora ATCC 49946 | EAM_1366 | -101 | 3.8 | AAATAAACGTTTTTTA |
Yersinia pestis KIM | y2755 | -254 | 5.4 | TCGCAAACGTTTACTT |
Serratia proteamaculans 568 | Spro_1740 | -110 | 4.2 | GGGAAAACGATTGCGT |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2538 | -126 | 4.7 | CCGCAAACGTTTTACT |
Edwardsiella tarda EIB202 | ETAE_1248 | -108 | 3.9 | AGTAAAACGTTTGCTT |
Proteus mirabilis HI4320 | PMI0771 | -102 | 4.2 | ATTGAAACGTTTACTT |
Position: -67
Score: 4.3 Sequence: AGGAAAACGTTTCCGC
Locus tag: S1146
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S1146 | -67 | 4.3 | AGGAAAACGTTTCCGC | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: pyrC | ||||
Ortholog function: dihydroorotase | ||||
Escherichia coli str. K-12 substr. MG1655 | b1062 | -67 | 4.3 | AGGAAAACGTTTCCGC |
Salmonella typhimurium LT2 | STM1163 | -65 | 4.6 | ACGAAAACGTTTCCGC |
Citrobacter koseri ATCC BAA-895 | CKO_02001 | -66 | 4.6 | ACGAAAACGTTTCCGC |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01074 | -77 | 4.9 | AGGAAAACGTTTACGC |
Enterobacter sp. 638 | Ent638_1576 | -82 | 5.1 | ACGAAAACGTTTACGC |
Proteus mirabilis HI4320 | PMI1678 | -99 | 4.2 | ATTTAATCGTTTTCGT |
-48 | 3.8 | ATCCAATCGTTGATCT | ||
Position: -60
Score: 5.4 Sequence: AGGCAAACGTTTACCT
Position: 28
Score: 4.4 Sequence: GAGCAAACGTTTCCAC
Locus tag: S1818
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S1818 | -60 | 5.4 | AGGCAAACGTTTACCT | |
28 | 4.4 | GAGCAAACGTTTCCAC | ||
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: purR | ||||
Ortholog function: purine nucleotide synthesis repressor | ||||
Escherichia coli str. K-12 substr. MG1655 | b1658 | -60 | 5.4 | AGGCAAACGTTTACCT |
28 | 4.4 | GAGCAAACGTTTCCAC | ||
Salmonella typhimurium LT2 | STM1430 | -58 | 5.4 | AGGCAAACGTTTACCT |
28 | 4.3 | GGGCAAACGTTTCCAC | ||
Citrobacter koseri ATCC BAA-895 | CKO_01672 | -60 | 5.6 | AGGCAAACGTTTACTT |
28 | 4.4 | GAGCAAACGTTTCCAC | ||
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01996 | -59 | 5.7 | AGGCAAACGTTTACGT |
28 | 4.6 | GCGCAAACGTTTCCAC | ||
Enterobacter sp. 638 | Ent638_1789 | -60 | 5.4 | AGGCAAACGTTTACCT |
28 | 4.6 | GCGCAAACGTTTCCAC | ||
Erwinia amylovora ATCC 49946 | EAM_1663 | -62 | 4.3 | AGGCAAACGATTAACA |
Yersinia pestis KIM | y1950 | -62 | 4.3 | AGGCAAACGATTAACA |
Serratia proteamaculans 568 | Spro_2195 | -62 | 4.3 | AGGCAAACGATTAACA |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1925 | -60 | 4.3 | AGGCAAACGATTAACA |
Edwardsiella tarda EIB202 | ETAE_1674 | -57 | 4.3 | AGGCAAACGATTAACA |
Position: -224
Score: 4.9 Sequence: ACGCAAACGATTTACT
Locus tag: S1849
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S1849 | -224 | 4.9 | ACGCAAACGATTTACT | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: ydiJ | ||||
Ortholog function: predicted FAD-linked oxidoreductase | ||||
Escherichia coli str. K-12 substr. MG1655 | b1687 | -224 | 4.9 | ACGCAAACGATTTACT |
Salmonella typhimurium LT2 | STM1365 | -100 | 5 | ACGCAAACGATTAAGC |
Citrobacter koseri ATCC BAA-895 | CKO_01722 | -49 | 4.7 | ACGCAAACGATTAAAT |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02158 | -68 | 5.2 | ACGCAAACGTTTAGTT |
Enterobacter sp. 638 | Ent638_1747 | -165 | 5 | ACGCAAACGATTATCT |
Erwinia amylovora ATCC 49946 | EAM_1648 | -35 | 4 | ACGCAATCGATTCTCA |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1856 | -237 | 4.2 | GCGCACACGATTGCGA |
Photorhabdus luminescens subsp. laumondii TTO1 | plu2626 | -129 | 3.7 | AGGTAAACGCTTGCCT |
Position: -53
Score: 6 Sequence: ACGCAAACGTTTTCGT
Locus tag: S1925
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S1925 | -53 | 6 | ACGCAAACGTTTTCGT | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: purT | ||||
Ortholog function: phosphoribosylglycinamide formyltransferase 2 | ||||
Escherichia coli str. K-12 substr. MG1655 | b1849 | -53 | 6 | ACGCAAACGTTTTCGT |
Salmonella typhimurium LT2 | STM1883 | -51 | 6 | ACGCAAACGTTTTCGT |
Citrobacter koseri ATCC BAA-895 | CKO_01117 | -52 | 6 | ACGCAAACGTTTTCGT |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02364 | -56 | 6 | ACGCAAACGTTTTCGT |
Enterobacter sp. 638 | Ent638_2418 | -49 | 6 | ACGCAAACGTTTTCGT |
Erwinia amylovora ATCC 49946 | EAM_1994 | -58 | 6 | ACGCAAACGTTTTCGT |
Yersinia pestis KIM | y2533 | -85 | 5.9 | ACGCAATCGTTTTCGT |
Serratia proteamaculans 568 | Spro_2805 | -74 | 6 | ACGCAAACGTTTTCGT |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2477 | -59 | 6 | ACGCAAACGTTTTCGT |
Edwardsiella tarda EIB202 | ETAE_1838 | -107 | 5.9 | ACGCAAACGGTTTCGT |
Proteus mirabilis HI4320 | PMI2187 | -50 | 5.4 | ATGCAAACGTTTGCGT |
Position: -72
Score: 5.9 Sequence: ACGCAAACGTTTTCTT
Locus tag: S2524
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S2524 | -72 | 5.9 | ACGCAAACGTTTTCTT | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: cvpA | ||||
Ortholog function: membrane protein required for colicin V production | ||||
Escherichia coli str. K-12 substr. MG1655 | b2313 | -72 | 5.9 | ACGCAAACGTTTTCTT |
Salmonella typhimurium LT2 | STM2363 | -72 | 5.9 | ACGCAAACGTTTTCTT |
Citrobacter koseri ATCC BAA-895 | CKO_00473 | -72 | 5.9 | ACGCAAACGTTTTCTT |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02703 | -71 | 5.9 | ACGCAAACGTTTTCTT |
Enterobacter sp. 638 | Ent638_2862 | -72 | 5.9 | ACGCAAACGTTTTCTT |
Erwinia amylovora ATCC 49946 | EAM_2319 | -92 | 5.9 | ACGCAAACGTTTTCTT |
Yersinia pestis KIM | y1604 | -74 | 5.9 | ACGCAAACGTTTTCTT |
Serratia proteamaculans 568 | Spro_3329 | -74 | 6 | ACGCAAACGTTTACGT |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3053 | -90 | 5.9 | ACGCAAACGTTTTCTT |
Proteus mirabilis HI4320 | PMI1784 | -71 | 6 | ACGCAAACGTTTTCGT |
Photorhabdus luminescens subsp. laumondii TTO1 | plu3168 | -72 | 6 | ACGCAAACGTTTTCGT |
Position: -169
Score: 5 Sequence: ACGCAAACGTGTGCGT
Locus tag: S2669
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S2669 | -169 | 5 | ACGCAAACGTGTGCGT | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: purC | ||||
Ortholog function: phosphoribosylaminoimidazole-succinocarboxamidesynthase | ||||
Escherichia coli str. K-12 substr. MG1655 | b2476 | -169 | 5 | ACGCAAACGTGTGCGT |
Salmonella typhimurium LT2 | STM2487 | -131 | 5 | ACGCAAACGTGTGCGT |
Citrobacter koseri ATCC BAA-895 | CKO_00311 | -145 | 5 | ACGCAAACGTGTGCGT |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02810 | -187 | 5 | ACGCAAACGTGTGCGT |
Enterobacter sp. 638 | Ent638_2972 | -68 | 5 | ACGCAAACGTGTGCGT |
Erwinia amylovora ATCC 49946 | EAM_2430 | -151 | 4.6 | ACGTAAACGATTGCTT |
Serratia proteamaculans 568 | Spro_3507 | -88 | 4.1 | ACGGTATCGTTTGCGT |
Edwardsiella tarda EIB202 | ETAE_1098 | -97 | 4.5 | ACGCAATCGTTTGGCT |
Position: -64
Score: 5.1 Sequence: TCGCAAACGTTTGCTT
Locus tag: S2692
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S2692 | -64 | 5.1 | TCGCAAACGTTTGCTT | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: purM | ||||
Ortholog function: phosphoribosylformylglycinamidine cyclo-ligase | ||||
Escherichia coli str. K-12 substr. MG1655 | b2499 | -79 | 5.1 | TCGCAAACGTTTGCTT |
Salmonella typhimurium LT2 | STM2499.S | -63 | 5.1 | TCGCAAACGTTTGCTT |
Citrobacter koseri ATCC BAA-895 | CKO_00291 | -299 | 5.1 | TCGCAAACGTTTGCTT |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02824 | -74 | 5.1 | TCGCAAACGTTTGCTT |
Enterobacter sp. 638 | Ent638_2988 | -79 | 4.9 | TCGCAAACGTTTGCCT |
Erwinia amylovora ATCC 49946 | EAM_2441 | -84 | 5.1 | TCGCAAACGTTTGCTT |
Yersinia pestis KIM | y1407 | -242 | 4.9 | TCGCAAACGTTTGCCT |
Serratia proteamaculans 568 | Spro_3524 | -59 | 4.9 | TCGCAAACGTTTGCCT |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1254 | -129 | 4.6 | TCGCAAACGATTGCCT |
Edwardsiella tarda EIB202 | ETAE_1086 | -116 | 4.9 | TAGCAAACGTTTGCTT |
Proteus mirabilis HI4320 | PMI1575 | -79 | 5.1 | TCGCAAACGTTTGCTT |
Photorhabdus luminescens subsp. laumondii TTO1 | plu2760 | -80 | 5.1 | TCGCAAACGTTTGCTT |
Position: -69
Score: 5.2 Sequence: ATGCAATCGGTTACGC
Locus tag: S2726
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S2726 | -69 | 5.2 | ATGCAATCGGTTACGC | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: guaB | ||||
Ortholog function: inosine-5'-monophosphate dehydrogenase | ||||
Escherichia coli str. K-12 substr. MG1655 | b2508 | -69 | 5.2 | ATGCAATCGGTTACGC |
Salmonella typhimurium LT2 | STM2511 | -68 | 5.3 | ATGCAACCGATTACGT |
Citrobacter koseri ATCC BAA-895 | CKO_00279 | -69 | 5.3 | ATGCAATCGGTTTCGC |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02834 | -66 | 5.2 | ATGCAATCGGTTACGC |
Enterobacter sp. 638 | Ent638_2999 | -67 | 5.2 | ATGCAATCGGTTACGC |
Erwinia amylovora ATCC 49946 | EAM_2465 | -78 | 4.9 | AGGCAATCGATTACGG |
Yersinia pestis KIM | y1362 | 6 | 5.2 | AGGCAATCGATTACGC |
Serratia proteamaculans 568 | Spro_3596 | -78 | 5.1 | AGGCAACCGATTACGC |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3209 | -79 | 5.2 | AGGCAATCGATTACGC |
Edwardsiella tarda EIB202 | ETAE_2787 | -79 | 5 | AGGCAACCGGTTTCGG |
Proteus mirabilis HI4320 | PMI1546 | -77 | 4.9 | AAGCAACCGATTACGG |
Photorhabdus luminescens subsp. laumondii TTO1 | plu2713 | -80 | 5.3 | AGGCAACCGATTACGT |
Position: -134
Score: 4.5 Sequence: AGGTAATCGTTTGCGT
Locus tag: S2770
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S2770 | -134 | 4.5 | AGGTAATCGTTTGCGT | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: glyA | ||||
Ortholog function: serine/glycine hydroxymethyltransferase | ||||
Escherichia coli str. K-12 substr. MG1655 | b2551 | -134 | 4.5 | AGGTAATCGTTTGCGT |
Salmonella typhimurium LT2 | STM2555 | -132 | 4.5 | AGGTAATCGTTTGCGT |
Citrobacter koseri ATCC BAA-895 | CKO_00237 | -126 | 4.5 | AGGTAATCGTTTGCGT |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02876 | -133 | 4.5 | AGCCAATCGTTTGCGT |
Enterobacter sp. 638 | Ent638_3036 | -131 | 4.7 | AGGTAAACGTTTGCGT |
Erwinia amylovora ATCC 49946 | EAM_2497 | -129 | 4.5 | AGCCAATCGTTTGCGT |
Yersinia pestis KIM | y1322 | -324 | 4.5 | AGCCAATCGTTTGCGT |
Serratia proteamaculans 568 | Spro_3638 | -135 | 4 | TGCCAATCGTTTGCGT |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3250 | -152 | 3.8 | AGCTAATCGTTTGCGT |
Edwardsiella tarda EIB202 | ETAE_2821 | -147 | 4 | TGCCAAACGATTGCGT |
Proteus mirabilis HI4320 | PMI1867 | -128 | 4.7 | TAGCAAACGATTGCGT |
Photorhabdus luminescens subsp. laumondii TTO1 | plu3291 | -126 | 5.2 | ATGCAATCGTTTGCGT |
Position: -93
Score: 5.9 Sequence: ACGCAAACGGTTTCGT
Locus tag: S2776
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S2776 | -93 | 5.9 | ACGCAAACGGTTTCGT | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: purL | ||||
Ortholog function: phosphoribosylformylglycinamidine synthase | ||||
Escherichia coli str. K-12 substr. MG1655 | b2557 | -92 | 5.9 | ACGCAAACGGTTTCGT |
Salmonella typhimurium LT2 | STM2565 | -90 | 5.9 | ACGCAAACGGTTTCGT |
Citrobacter koseri ATCC BAA-895 | CKO_00226 | 29 | 5.9 | ACGCAAACGGTTTCGT |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02882 | -91 | 5.9 | ACGCAAACGGTTTCGT |
Enterobacter sp. 638 | Ent638_3042 | -101 | 5.9 | ACGCAAACGGTTTCGT |
Erwinia amylovora ATCC 49946 | EAM_2502 | -104 | 5.6 | GCGCAAACGGTTTCGT |
Yersinia pestis KIM | y1309 | -130 | 5.9 | ACGCAAACGGTTTCGT |
Serratia proteamaculans 568 | Spro_3654 | -113 | 5.9 | ACGCAAACGGTTTCGT |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3258 | -113 | 5.9 | ACGCAAACGGTTTCGT |
Edwardsiella tarda EIB202 | ETAE_0774 | -116 | 5.9 | ACGCAAACGGTTTCGT |
Proteus mirabilis HI4320 | PMI1875 | -98 | 5.9 | ACGCAAACGGTTTCGT |
Photorhabdus luminescens subsp. laumondii TTO1 | plu3317 | -91 | 5.9 | ACGCAAACGGTTTCGT |
Position: -106
Score: 3.8 Sequence: AAGAGAACGATTGCGT
Locus tag: S3090
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S3090 | -106 | 3.8 | AAGAGAACGATTGCGT | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: gcvT | ||||
Ortholog function: Glycine cleavage system, aminomethyltransferase (EC 2.1.2.10) | ||||
Escherichia coli str. K-12 substr. MG1655 | b2905 | -106 | 3.8 | AAGAGAACGATTGCGT |
Salmonella typhimurium LT2 | STM3055 | -108 | 4 | AAGAGAACGTTTGCGT |
Citrobacter koseri ATCC BAA-895 | CKO_04269 | -106 | 4 | AAGAGAACGTTTGCGT |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03341 | -107 | 4 | AAGAGAACGTTTGCGT |
Enterobacter sp. 638 | Ent638_3324 | -104 | 4 | AAGAGAACGTTTGCGT |
Erwinia amylovora ATCC 49946 | EAM_2791 | -74 | 4 | AGGGTAACGTTTGCGT |
Yersinia pestis KIM | y3294 | -104 | 4 | GAGCAAAAGGTATCGT |
-98 | 3.8 | AAGGTATCGTTTGCGT | ||
Serratia proteamaculans 568 | Spro_3916 | -163 | 3.8 | AAGGTATCGTTTGCGT |
Photorhabdus luminescens subsp. laumondii TTO1 | plu3598 | -108 | 3.8 | AAGATATCGTTTGCGT |
Position: -95
Score: 4.5 Sequence: ACGCAAACGTTCATAT
Locus tag: S3098
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S3098 | -95 | 4.5 | ACGCAAACGTTCATAT | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: serA | ||||
Ortholog function: D-3-phosphoglycerate dehydrogenase | ||||
Escherichia coli str. K-12 substr. MG1655 | b2913 | -95 | 4.5 | ACGCAAACGTTCATAT |
Salmonella typhimurium LT2 | STM3062 | -102 | 4.2 | GCGCAAACGTTCATAT |
Citrobacter koseri ATCC BAA-895 | CKO_04278 | -105 | 4.5 | ACGCAAACGTTCATAT |
-87 | 4.3 | CCGCAATAGTTTTTTT | ||
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03348 | -99 | 4.5 | ACGCAAACGTTCATAT |
Enterobacter sp. 638 | Ent638_3332 | -100 | 4.5 | ACGCAAACGTTCATAT |
Erwinia amylovora ATCC 49946 | EAM_2798 | -213 | 4.8 | AGGCAATCGTTTTTAT |
Yersinia pestis KIM | y3301 | 9 | 4.4 | AGGCAATCGTTTGTAT |
Serratia proteamaculans 568 | Spro_3923 | -99 | 4.1 | GGGCAATCGTTTGTAT |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3905 | -98 | 4.4 | AAGCAATCGTTTGTAT |
Proteus mirabilis HI4320 | PMI2031 | -94 | 4 | GTGCAATCGGTTGTAT |
Photorhabdus luminescens subsp. laumondii TTO1 | plu3605 | -91 | 4.3 | TAGCAATCGTTTATAT |
Position: -273
Score: 4.1 Sequence: ACGATAACGTTTGCGC
Position: -130
Score: 3.9 Sequence: AGCTAAACGTTTGCTT
Locus tag: S3591
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S3591 | -273 | 4.1 | ACGATAACGTTTGCGC | |
-130 | 3.9 | AGCTAAACGTTTGCTT | ||
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: yjcD | ||||
Ortholog function: putative xanthine/uracil permease | ||||
Escherichia coli str. K-12 substr. MG1655 | b4064 | -272 | 4.1 | ACGATAACGTTTGCGC |
-130 | 3.9 | AGCTAAACGTTTGCTT | ||
Salmonella typhimurium LT2 | STM4268 | -271 | 4.1 | ACGATAACGTTTGCGC |
-128 | 3.9 | AGCTAAACGTTTGCTT | ||
Citrobacter koseri ATCC BAA-895 | CKO_03825 | -263 | 4.1 | ACGATAACGTTTGCGC |
-121 | 3.9 | AGTTAAACGTTTGCTT | ||
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04465 | -316 | 4.1 | ACGATAACGTTTGCGC |
-129 | 3.9 | AGTTAAACGTTTGCTT | ||
Enterobacter sp. 638 | Ent638_0269 | -278 | 4.1 | ACGATAACGTTTGCGC |
-134 | 3.9 | AGCTAAACGTTTGCTT | ||
Erwinia amylovora ATCC 49946 | EAM_0319 | -146 | 3.8 | ATAAAAACGTTTGCCT |
Position: -123
Score: 5.8 Sequence: GCGCAAACGTTTTCGT
Locus tag: S3657
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S3657 | -123 | 5.8 | GCGCAAACGTTTTCGT | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: purH | ||||
Ortholog function: phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase | ||||
Escherichia coli str. K-12 substr. MG1655 | b4006 | -123 | 5.8 | GCGCAAACGTTTTCGT |
Salmonella typhimurium LT2 | STM4176 | -123 | 5.8 | GCGCAAACGTTTTCGT |
Citrobacter koseri ATCC BAA-895 | CKO_02983 | -123 | 5.8 | GCGCAAACGTTTTCGT |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04388 | -126 | 5.8 | GCGCAAACGTTTTCGT |
Enterobacter sp. 638 | Ent638_0216 | -60 | 5.8 | GCGCAAACGTTTTCGT |
Erwinia amylovora ATCC 49946 | EAM_0249 | -144 | 5.7 | GCGCAAACGTTTTCGC |
Yersinia pestis KIM | y0502 | -111 | 5.7 | ACGCAATCGTTTTCGC |
Serratia proteamaculans 568 | Spro_0293 | -179 | 5.9 | ACGCAAACGTTTTCGC |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0241 | -159 | 5.9 | ACGCAAACGTTTTCGC |
Edwardsiella tarda EIB202 | ETAE_0186 | -116 | 6 | ACGCAAACGTTTTCGT |
Proteus mirabilis HI4320 | PMI2768 | -155 | 5.6 | ACGCAAACGTTTGCGT |
Photorhabdus luminescens subsp. laumondii TTO1 | plu0495 | -283 | 6 | ACGCAAACGTTTTCGT |
Position: -115
Score: 4.9 Sequence: ACGCAATCGTTGCCGT
Locus tag: S4026
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S4026 | -115 | 4.9 | ACGCAATCGTTGCCGT | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: purP | ||||
Ortholog function: high affinity adenine permease | ||||
Escherichia coli str. K-12 substr. MG1655 | b3714 | -147 | 3.7 | AGTTTAACGTTTTCGT |
-115 | 4.9 | ACGCAATCGTTGCCGT | ||
Salmonella typhimurium LT2 | STM3851.S | -118 | 4.9 | ACGCAATCGTTGCCGT |
Citrobacter koseri ATCC BAA-895 | CKO_00059 | -148 | 3.7 | AGTTTAACGTTTTCGT |
-116 | 4.9 | ACGCAATCGTTGCCGT | ||
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04124 | -151 | 3.7 | AGTTTAACGTTTTCGT |
-119 | 4.9 | ACGCAATCGTTGCCGT | ||
Enterobacter sp. 638 | Ent638_4143 | -115 | 4.9 | ACGCAATCGTTGCCGT |
Erwinia amylovora ATCC 49946 | EAM_3460 | -99 | 4.8 | GCGCAATCGGTTGCGA |
Serratia proteamaculans 568 | Spro_0021 | 87 | 4 | ACGGAAACGATTGCCG |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4464 | 162 | 4 | ACGGAAACGATTGCCG |
Edwardsiella tarda EIB202 | ETAE_3545 | -132 | 3.8 | ATATAAGCGTTTGCGT |
Proteus mirabilis HI4320 | PMI2915 | -92 | 5.5 | ACGCAATCGATTACTT |
Position: -68
Score: 4.8 Sequence: TGGCAAACGTTTGCTT
Position: 30
Score: 4.8 Sequence: GCGCAACCGGTTGCTC
Locus tag: S4075
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S4075 | -68 | 4.8 | TGGCAAACGTTTGCTT | |
30 | 4.8 | GCGCAACCGGTTGCTC | ||
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: xanP | ||||
Ortholog function: xanthine/uracil permease, NCS2 family | ||||
Escherichia coli str. K-12 substr. MG1655 | b3654 | -68 | 4.8 | TGGCAAACGTTTGCTT |
30 | 4.9 | GCGCAACCGGTTGCGC | ||
Salmonella typhimurium LT2 | STM3747 | -68 | 4.9 | TCGCAATCGTTTGCTT |
30 | 4.9 | GCGCAACCGGTTGCGC | ||
Citrobacter koseri ATCC BAA-895 | CKO_05111 | -53 | 5.1 | ATGCAATCGTTTGCTT |
45 | 4.9 | GCGCAACCGGTTGCGC | ||
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04013 | -68 | 4.8 | TGGCAAACGTTTGCTT |
30 | 4.9 | GCGCAACCGGTTGCGC | ||
Enterobacter sp. 638 | Ent638_0073 | -68 | 4.9 | TCGCAACCGTTTGCTT |
30 | 4.8 | GCGCAACCGATTGCGC | ||
Erwinia amylovora ATCC 49946 | EAM_0040 | -69 | 4.6 | TAGCAAACGATTGCTT |
Yersinia pestis KIM | y0107 | -18 | 5.1 | GCGCAAACGATTGCTT |
Serratia proteamaculans 568 | Spro_4873 | -70 | 5.1 | GCGCAACCGTTTGCTT |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0035 | -74 | 4.9 | TAGCAAACGTTTGCTT |
Edwardsiella tarda EIB202 | ETAE_0025 | -70 | 5.3 | ACGCAAACGATTGCTT |
Proteus mirabilis HI4320 | PMI2868 | -68 | 5.3 | ACGCAAACGATTGCTT |
Photorhabdus luminescens subsp. laumondii TTO1 | plu0247 | -68 | 5.3 | ACGCAAACGATTGCTT |
Position: -159
Score: 3.7 Sequence: AGGTTAACGATTGCGT
Locus tag: S4274
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S4274 | -159 | 3.7 | AGGTTAACGATTGCGT | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: yhhQ | ||||
Ortholog function: conserved inner membrane protein | ||||
Escherichia coli str. K-12 substr. MG1655 | b3471 | -159 | 3.7 | AGGTTAACGATTGCGT |
Salmonella typhimurium LT2 | STM3579 | -108 | 3.7 | AGGTTAACGATTGCGT |
Citrobacter koseri ATCC BAA-895 | CKO_04901 | -109 | 3.8 | AAGTTAACGATTGCGT |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03837 | -147 | 3.8 | AGGTTAACGTTTGCGC |
-93 | 3.7 | ATGCAGCCGTTTTTAA | ||
Enterobacter sp. 638 | Ent638_3878 | -160 | 3.7 | AGGTTAACGATTGCGT |
Erwinia amylovora ATCC 49946 | EAM_3301 | -164 | 3.8 | GTCCAAAAGATTTCGC |
Yersinia pestis KIM | y0408 | -90 | 3.8 | GCGCAAACGCGTATTA |
Serratia proteamaculans 568 | Spro_0204 | -257 | 4 | GCGTTAACGTTTGCGT |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4354 | -150 | 4.1 | ACGACAACGTTTGCGC |
Edwardsiella tarda EIB202 | ETAE_0019 | -127 | 3.8 | GCGTTAACGATTGCGT |
Proteus mirabilis HI4320 | PMI3596 | -53 | 3.8 | AATCATACGTTTTATT |
Position: -92
Score: 3.7 Sequence: AATAAACCGTTTGCGC
Locus tag: S4505
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S4505 | -92 | 3.7 | AATAAACCGTTTGCGC | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: pyrL | ||||
Ortholog function: pyrBI operon leader peptide | ||||
Escherichia coli str. K-12 substr. MG1655 | b4246 | -92 | 3.7 | AATAAACCGTTTGCGC |
Position: -22
Score: 4.8 Sequence: AAGCAAACGGTGATTT
Locus tag: S4600
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S4600 | -22 | 4.8 | AAGCAAACGGTGATTT | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: purA | ||||
Ortholog function: adenylosuccinate synthetase | ||||
Escherichia coli str. K-12 substr. MG1655 | b4177 | -22 | 4.8 | AAGCAAACGGTGATTT |
Salmonella typhimurium LT2 | STM4366 | -22 | 4.8 | AAGCAAACGGTGATTT |
Citrobacter koseri ATCC BAA-895 | CKO_03657 | -22 | 4.8 | AAGCAAACGGTGATTT |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04576 | -22 | 4.8 | AAGCAAACGGTGATTT |
Enterobacter sp. 638 | Ent638_0360 | -21 | 4.6 | AAGCAATCGGTGATTT |
Erwinia amylovora ATCC 49946 | EAM_0441 | -80 | 4.2 | GCGCAATCGTATGCTA |
-21 | 4.6 | AAGCAATCGGTGATTT | ||
Serratia proteamaculans 568 | Spro_0436 | -21 | 4.6 | AAGCAACCGGTGATTT |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3929 | -81 | 4.2 | GCGCAACCGTGTGCTA |
Edwardsiella tarda EIB202 | ETAE_0358 | -81 | 4.4 | GCGCAATCGTGTGCGA |