Propagation of Fur regulog to Yersinia enterocolitica subsp. enterocolitica 8081
| Source regulog: | Fur - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | FUR |
| Regulation mode: | repressor (activator) |
| Biological process: | Iron homeostasis |
| Effector: | Iron ion, (Fe2+) |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Yersinia enterocolitica subsp. enterocolitica 8081 |
| Orthologous TF(s) | YE2973 |
| Regulated genes | 46 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -236
Score: 4.2 Sequence: GATAGTTATTGTGATTATC
Position: -230
Score: 4.5 Sequence: TATTGTGATTATCATTTGC
Locus tag: YE0316
|
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| YE0316 | -236 | 4.2 | GATAGTTATTGTGATTATC | |
| -230 | 4.5 | TATTGTGATTATCATTTGC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: PMI3708 | ||||
| Ortholog function: ECF-family sigma factor | ||||
| Proteus mirabilis HI4320 | PMI3708 | -115 | 4.2 | GATATTGCTTATTATTAAT |
| -75 | 4.2 | AATATTGATTATAAAAATT | ||
|
Position: -81
Score: 4.7 Sequence: GAGGATAATTCTCATTATC
Locus tag: YE0318
|
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| YE0318 | -81 | 4.7 | GAGGATAATTCTCATTATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yddB | ||||
| Ortholog function: TonB-dependent receptor | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1495 | -4 | 4.4 | GCTAATGATAACCATTCCC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0878 | -269 | 4.4 | TAAAACGATTATCATTTGT |
| -263 | 4.1 | GATTATCATTTGTATTATT | ||
| Proteus mirabilis HI4320 | PMI3706 | -115 | 4.2 | GATATTGCTTATTATTAAT |
| -75 | 4.2 | AATATTGATTATAAAAATT | ||
|
Position: -174
Score: 4.7 Sequence: ATTAAAGATAATAATTATC
Position: -168
Score: 4.9 Sequence: GATAATAATTATCATTGTA
Locus tag: YE0323
|
||||
| YE0323 | -174 | 4.7 | ATTAAAGATAATAATTATC | |
| -168 | 4.9 | GATAATAATTATCATTGTA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: foxA | ||||
| Ortholog function: TonB-dependent siderophore receptor | ||||
| Salmonella typhimurium LT2 | STM0364 | -26 | 4.5 | GGTAATAATTCTTATTTAC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02304 | -98 | 4.2 | AATAATAATTCGCATTACT |
| Enterobacter sp. 638 | Ent638_0493 | -45 | 4.7 | GGTAATAATTCTTATTAAC |
| Erwinia amylovora ATCC 49946 | EAM_0358 | -123 | 4.4 | AAAAAAGATAATAATTCTC |
| -117 | 5 | GATAATAATTCTCATTTAC | ||
| Serratia proteamaculans 568 | Spro_2736 | -140 | 4.9 | GATAAAGATAATAATTATC |
| -134 | 5.2 | GATAATAATTATCATTAAT | ||
|
Position: -49
Score: 4.3 Sequence: GCGTATGATTATCATTTAA
Locus tag: YE0335
|
||||
| YE0335 | -49 | 4.3 | GCGTATGATTATCATTTAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hemN1 | ||||
| Ortholog function: coproporphyrinogen III oxidase, iron utilization | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_02656 | -45 | 4.2 | GCGAATGATAATGATGATC |
| -39 | 4.7 | GATAATGATGATCATTTAC | ||
| Yersinia pestis KIM | y0547 | -54 | 4.1 | TCGAATGCTTATGATTATC |
| -48 | 4.4 | GCTTATGATTATCATTTAA | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3009 | -55 | 4.2 | CCAAATAAAAATAATTATC |
| -49 | 4.6 | AAAAATAATTATCATTTAA | ||
| Edwardsiella tarda EIB202 | ETAE_1793 | -59 | 4.4 | TCGAATGATAACTATTATC |
| -53 | 4.4 | GATAACTATTATCATTCAA | ||
|
Position: -316
Score: 5.3 Sequence: GATAATGATAACCAATATC
Locus tag: YE0557
|
||||
| YE0557 | -316 | 5.3 | GATAATGATAACCAATATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hmsT | ||||
| Ortholog function: diguanylate cyclase, involved in hemin storage | ||||
| Salmonella typhimurium LT2 | STM4551 | -238 | 4 | GGAATTGATAATGATAACC |
| -232 | 5.1 | GATAATGATAACCAATATC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03428 | -234 | 4.8 | GATAATGATAACCAATAGC |
| Enterobacter sp. 638 | Ent638_0528 | -237 | 5.1 | GATAATGATAACCAATATC |
| Erwinia amylovora ATCC 49946 | EAM_0564 | -224 | 4.5 | ATAAATGATAATGATTACC |
| -218 | 4.8 | GATAATGATTACCAATAGC | ||
| -201 | 4.3 | GCATATGTTAATCATTATC | ||
| -195 | 4.4 | GTTAATCATTATCACTTTG | ||
| Yersinia pestis KIM | y3756 | -275 | 5 | gataatgataatcataacc |
| -269 | 4.9 | gataatcataaccaatatc | ||
| Serratia proteamaculans 568 | Spro_0645 | -243 | 4.6 | GATAATGAGAACTAATATC |
|
Position: -89
Score: 5.3 Sequence: GATATTGGTTATCATTATC
Locus tag: YE0558
|
||||
| YE0558 | -89 | 5.3 | GATATTGGTTATCATTATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yjjZ | ||||
| Ortholog function: putative membrane protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4567 | -60 | 4.4 | GCAAATGATAAAAATTATC |
| -37 | 5.2 | GATATTGGTTATCATTATC | ||
| Salmonella typhimurium LT2 | STM4552 | -37 | 5.2 | GATATTGGTTATCATTATC |
| -31 | 4.2 | GGTTATCATTATCAATTCC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03427 | 2 | 4.9 | GCTATTGGTTATCATTATC |
| 8 | 4.1 | GGTTATCATTATCGGTATC | ||
| Enterobacter sp. 638 | Ent638_0529 | -37 | 5.2 | GATATTGGTTATCATTATC |
| -31 | 4 | GGTTATCATTATCATATTG | ||
| Erwinia amylovora ATCC 49946 | EAM_0565 | -70 | 4.3 | CAAAGTGATAATGATTAAC |
| -64 | 4.3 | GATAATGATTAACATATGC | ||
| -47 | 4.9 | GCTATTGGTAATCATTATC | ||
| -41 | 4.8 | GGTAATCATTATCATTTAT | ||
| Yersinia pestis KIM | y3754 | -4 | 4.9 | GATATTGGTTATGATTATC |
| 2 | 5.2 | GGTTATGATTATCATTATC | ||
| Serratia proteamaculans 568 | Spro_0646 | -39 | 4.7 | GATATTAGTTCTCATTATC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0738 | -89 | 5 | GATATTAGTTATCATTATC |
| -83 | 4.5 | AGTTATCATTATCATTTTT | ||
| Proteus mirabilis HI4320 | PMI2497 | -27 | 5.3 | AATAATGAAAATCATTATC |
| -21 | 5.2 | GAAAATCATTATCATTAAC | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4253 | -92 | 5.2 | GATATTGGTAATCATTATC |
| -86 | 4.7 | GGTAATCATTATCATTTGT | ||
|
Position: -103
Score: 4.3 Sequence: GATAATTATTATCGTTTCG
Locus tag: YE0730
|
||||
| YE0730 | -103 | 4.3 | GATAATTATTATCGTTTCG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fhuC | ||||
| Ortholog function: iron-hydroxamate transporter ATP-binding subunit | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0151 | -57 | 4.4 | CTTTATAATAATCATTCTC |
| -51 | 4.5 | AATAATCATTCTCGTTTAC | ||
| Salmonella typhimurium LT2 | STM0192 | -56 | 4.8 | GGTTATAATAATAATTATC |
| -50 | 4.8 | AATAATAATTATCGTTTAC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03217 | -57 | 4 | GGTCATAAGAATAATTCTC |
| -51 | 4.3 | AAGAATAATTCTCGTTTAC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00166 | -56 | 4 | CGTCATAATAATAATTCTC |
| -50 | 4.5 | AATAATAATTCTCGTTTAC | ||
| Enterobacter sp. 638 | Ent638_0691 | -58 | 4.3 | GGTCATAATAATAATTCTC |
| -52 | 4.5 | AATAATAATTCTCGTTTAC | ||
| Yersinia pestis KIM | y0796 | -157 | 4.4 | CGTTTTAATAATCATTATC |
| -151 | 4.7 | AATAATCATTATCGTTACC | ||
| Serratia proteamaculans 568 | Spro_3978 | -60 | 4.7 | GCTTATAATAATTATTATC |
| -54 | 4.7 | AATAATTATTATCGTTTAC | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3312 | -123 | 4.3 | CTTTATCGTAATCATTATC |
| -117 | 4.5 | CGTAATCATTATCGTTCTC | ||
|
Position: -76
Score: 4.5 Sequence: GCGTTTGATAATTATTATC
Position: -70
Score: 4.9 Sequence: GATAATTATTATCATTTAG
Locus tag: YE1219
|
||||
| YE1219 | -76 | 4.5 | GCGTTTGATAATTATTATC | |
| -70 | 4.9 | GATAATTATTATCATTTAG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mntH | ||||
| Ortholog function: Mn2+/Fe2+ transporter, NRAMP family | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2392 | -68 | 4.7 | GAATTTGATAATCATTCTC |
| -62 | 4.2 | GATAATCATTCTCGTTTGG | ||
| Salmonella typhimurium LT2 | STM2408 | -68 | 4.5 | GCACTTGATAATCATTATC |
| -62 | 4.8 | GATAATCATTATCAATAAA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00404 | -50 | 4.3 | GCACTTGATAATCATTCTC |
| -44 | 4.5 | GATAATCATTCTCAATAAA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02743 | -68 | 4.3 | GAACTTGATAATCATTCGC |
| -62 | 4.3 | GATAATCATTCGCATTTTG | ||
| Enterobacter sp. 638 | Ent638_2926 | -67 | 4.8 | GATCTTGATAATCATTCTC |
| -61 | 4.8 | GATAATCATTCTCATTTTG | ||
| Yersinia pestis KIM | y1500 | -78 | 4 | GCGCTTGATAATTATTCTC |
| -72 | 4.6 | GATAATTATTCTCATTTAA | ||
| Serratia proteamaculans 568 | Spro_3415 | -66 | 4.3 | GCACTTGATAATTATTATC |
| -60 | 5.2 | GATAATTATTATCATTTAC | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0843 | -63 | 4.5 | GCACTTGATAATCATTATC |
| -57 | 5.2 | GATAATCATTATCATTTTT | ||
| Edwardsiella tarda EIB202 | ETAE_1142 | -134 | 4.5 | GCAGTTGATAATCATTATC |
|
Position: -66
Score: 4.8 Sequence: CTTATTGATAATTATTATC
Position: -60
Score: 4.7 Sequence: GATAATTATTATCGTTTGT
Locus tag: YE1459
|
||||
| YE1459 | -66 | 4.8 | CTTATTGATAATTATTATC | |
| -60 | 4.7 | GATAATTATTATCGTTTGT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yiuB | ||||
| Ortholog function: ferric-enterobactin ABC-transporter, permease component | ||||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00519 | -54 | 4.1 | GAGAATAATTCTCAGAATC |
| Enterobacter sp. 638 | Ent638_0575 | -131 | 4.4 | TCAATTGATAAGCATTATC |
| Erwinia amylovora ATCC 49946 | EAM_2216 | -61 | 4.5 | GATAAGTATTATCATTTGC |
| -10 | 4 | GGTATTGATAATGAGTTTA | ||
| Yersinia pestis KIM | y2874 | -45 | 4.3 | CTTATTGATAAGTATTATC |
| -39 | 4.5 | GATAAGTATTATCATTTGC | ||
| Serratia proteamaculans 568 | Spro_3222 | -108 | 4.2 | ATGATTGATAAGTATTATC |
| -102 | 4.2 | GATAAGTATTATCGTTTGC | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3242 | -77 | 4.2 | ATATACGATAATAATTATC |
| -71 | 4.7 | GATAATAATTATCAAACTC | ||
| Edwardsiella tarda EIB202 | ETAE_1965 | -75 | 4.7 | GCTAATAATTTTCATTTAC |
| -53 | 4.5 | AATATTGATATTGATTAGC | ||
| -47 | 4.8 | GATATTGATTAGCGTTATC | ||
| Proteus mirabilis HI4320 | PMI0229 | -96 | 4.8 | GATAATGGTAACTATTATC |
| -90 | 4.3 | GGTAACTATTATCGTTATA | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2852 | -78 | 4.3 | CATATTGATAAGTATTCTC |
| -72 | 4 | GATAAGTATTCTCATTTGT | ||
|
Position: -220
Score: 3.8 Sequence: GCAAATAGGAATCATTCCT
Position: -187
Score: 4 Sequence: GGTAATGTGAATGATTCTT
Position: -181
Score: 3.9 Sequence: GTGAATGATTCTTATAAGA
Position: -175
Score: 3.7 Sequence: GATTCTTATAAGAATTAAC
Position: -133
Score: 3.5 Sequence: AAAGATATAAATCATTATG
Locus tag: YE1795
|
||||
| YE1795 | -220 | 3.8 | GCAAATAGGAATCATTCCT | |
| -187 | 4 | GGTAATGTGAATGATTCTT | ||
| -181 | 3.9 | GTGAATGATTCTTATAAGA | ||
| -175 | 3.7 | GATTCTTATAAGAATTAAC | ||
| -133 | 3.5 | AAAGATATAAATCATTATG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ftnA | ||||
| Ortholog function: ferritin | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1905 | -127 | 3.4 | GgTAATGcgttTtATTccC |
| -121 | 3 | GcgttTtATtccCATTcgt | ||
| Salmonella typhimurium LT2 | STM1935 | -100 | 4 | AATAATTAAATTTAATATT |
| Citrobacter koseri ATCC BAA-895 | CKO_01042 | -97 | 4.3 | AATAATTAAATTTATTATT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02402 | -161 | 4 | ATAAATTAAAAGCATTCTC |
| -155 | 3.8 | TAAAAGCATTCTCATTTAT | ||
| Enterobacter sp. 638 | Ent638_2486 | -103 | 3.7 | TATTTTAATAAATAATATC |
| -97 | 3.6 | AATAAATAATATCTTTATT | ||
| Erwinia amylovora ATCC 49946 | EAM_2940 | -131 | 4.4 | TGGAATGATTATCAATTAC |
| Yersinia pestis KIM | y2524 | -93 | 4.4 | AATAATGTGAATGATTATC |
| -87 | 4.1 | GTGAATGATTATCATGATG | ||
| Serratia proteamaculans 568 | Spro_1942 | -174 | 4.5 | GAAAATAGTTATCATAATT |
| -168 | 4 | AGTTATCATAATTATTTAA | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2473 | -158 | 4.6 | TTAAATGATAATGAATATC |
| -152 | 4.8 | GATAATGAATATCAATAGC | ||
| Proteus mirabilis HI4320 | PMI1007 | -184 | 4.7 | GTTAATGATAATCAATTCC |
| -178 | 4.1 | GATAATCAATTCCATTAAT | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2689 | -147 | 4.4 | TTAAATGAGATTCATTTTC |
| -141 | 4.4 | GAGATTCATTTTCATTTTT | ||
|
Position: -42
Score: 5.6 Sequence: GATATTGATAATCATTTTC
Position: -36
Score: 4.8 Sequence: GATAATCATTTTCATTTAA
Locus tag: YE1900
|
||||
| YE1900 | -42 | 5.6 | GATATTGATAATCATTTTC | |
| -36 | 4.8 | GATAATCATTTTCATTTAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sitA | ||||
| Ortholog function: iron ABC transporter, periplasmic substrate-binding protein | ||||
| Salmonella typhimurium LT2 | STM2861 | -99 | 4.5 | GCAAATAAGAATTATTTTC |
| -93 | 4.2 | AAGAATTATTTTCATTTAT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04090 | -84 | 4.5 | GTAAATAAGAATTATTTTC |
| -78 | 4.2 | AAGAATTATTTTCATTTAT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00940 | -111 | 4.1 | GATAAAGATAATTTTTCTC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03078 | -99 | 4.5 | GCAAATAAGAATTATTTTC |
| -93 | 4.2 | AAGAATTATTTTCATTTAT | ||
| Enterobacter sp. 638 | Ent638_1111 | -98 | 4.9 | TTTAATGATAATTATTTTC |
| -92 | 4.5 | GATAATTATTTTCATTTAA | ||
| Yersinia pestis KIM | y1897 | -39 | 5.2 | GGTATTGATAATCATTTTC |
| -33 | 4.7 | GATAATCATTTTCATTTGT | ||
| Serratia proteamaculans 568 | Spro_2133 | -41 | 5.4 | GATATTGATAATCATTTTC |
| -35 | 4.6 | GATAATCATTTTCATTTGA | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2392 | -53 | 5.1 | GATATTGATAATTATTCTC |
| Proteus mirabilis HI4320 | PMI1027 | -63 | 4.2 | TGAAATGATATTGATAATC |
| -57 | 5.5 | GATATTGATAATCATTATC | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2672 | -49 | 5.2 | GATATTGATAATCGTTATC |
| -43 | 4.5 | GATAATCGTTATCATATAC | ||
|
Position: -93
Score: 4.9 Sequence: CAGAATGATAATCACTATC
Position: -87
Score: 4.3 Sequence: GATAATCACTATCGTTTTA
Locus tag: YE1938
|
||||
| YE1938 | -93 | 4.9 | CAGAATGATAATCACTATC | |
| -87 | 4.3 | GATAATCACTATCGTTTTA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yijD | ||||
| Ortholog function: iron permease FTR1 | ||||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01045 | -76 | 5 | TGTAATGATAATCACTATC |
| -70 | 4.2 | GATAATCACTATCATAAAT | ||
| Enterobacter sp. 638 | Ent638_1545 | -76 | 4.9 | CGTAATGATAATCACTATC |
| Erwinia amylovora ATCC 49946 | EAM_2059 | -80 | 4.6 | GATAATGATAATCCCTATC |
| Yersinia pestis KIM | y2452 | -84 | 4.4 | CAGAATGATAATCACAATC |
| -78 | 4.3 | GATAATCACAATCGTTTTA | ||
| Serratia proteamaculans 568 | Spro_2929 | -109 | 4.8 | CAGAATGATAATCACTATC |
|
Position: -95
Score: 4.6 Sequence: TGAAGTGATAATTATTATC
Position: -89
Score: 4.9 Sequence: GATAATTATTATCACTACC
Locus tag: YE2172
|
||||
| YE2172 | -95 | 4.6 | TGAAGTGATAATTATTATC | |
| -89 | 4.9 | GATAATTATTATCACTACC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sufA | ||||
| Ortholog function: scaffold protein for iron-sulfur cluster assembly | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1684 | -65 | 4.4 | TGAACTGATAATCATTATC |
| -59 | 5.1 | GATAATCATTATCACTAAC | ||
| Salmonella typhimurium LT2 | STM1369 | -66 | 4.7 | TGAAGTGATAATCATTATC |
| -60 | 5.1 | GATAATCATTATCACTAAC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_01717 | -66 | 4.7 | TGAAGTGATAATCATTATC |
| -60 | 5.1 | GATAATCATTATCACTAAC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02141 | -66 | 4.7 | TGAAGTGATAATCATTATC |
| -60 | 5.1 | GATAATCATTATCACTAAC | ||
| Enterobacter sp. 638 | Ent638_1760 | -67 | 4.4 | TGAAGTGATAATCGTTATC |
| -61 | 4.7 | GATAATCGTTATCACTAAC | ||
| Yersinia pestis KIM | y1934 | -129 | 4.5 | TGAAGTGATAATTATTATC |
| -123 | 4.8 | GATAATTATTATCACTACC | ||
| Serratia proteamaculans 568 | Spro_2179 | -77 | 4.4 | TGAAGTGATAATCGTTATC |
| -71 | 4.7 | GATAATCGTTATCACTAAC | ||
| Proteus mirabilis HI4320 | PMI1416 | -66 | 4.4 | GATAAGGGTTATCATTACC |
| -60 | 4 | GGTTATCATTACCATTAGA | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2622 | -87 | 4.4 | GATAAAGGTTATCATTACC |
| -81 | 4.3 | GGTTATCATTACCATTATA | ||
|
Position: -339
Score: 4.4 Sequence: TCAAATGATAATTACTCTC
Locus tag: YE2238
|
||||
| YE2238 | -339 | 4.4 | TCAAATGATAATTACTCTC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: adhE | ||||
| Ortholog function: iron-containing aldehyde-alcohol dehydrogenase | ||||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02199 | -332 | 4 | TTTAATGCTAATCGTTTTT |
| -326 | 3.2 | GCTAATCGTTTTTTTAATT | ||
| Yersinia pestis KIM | y2023 | -339 | 5 | GATAATGACAATCATTCTC |
| -333 | 3.7 | GAcAATcATtcTCAaaAaa | ||
| Serratia proteamaculans 568 | Spro_2704 | -330 | 3.9 | GTTATCAAGAATGATTCTC |
| -324 | 4.2 | AAGAATGATTCTCAAAAAC | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2326 | -368 | 4.5 | CCTAATGATATTGATTATC |
| -362 | 5.2 | GATATTGATTATCAATATC | ||
| Edwardsiella tarda EIB202 | ETAE_1508 | -317 | 4 | aAagATGAgAtTCATTcTC |
| -311 | 4.3 | GAgAtTcATtcTCATTAaa | ||
| Proteus mirabilis HI4320 | PMI1486 | -300 | 4.5 | GTAATTAATTATCATTACC |
| -294 | 4 | AATTATCATTACCATTTAA | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2496 | -191 | 3.9 | ccaAtcaATAATaATTATC |
| -185 | 4.4 | AATAATAATTATCACTGAC | ||
|
Position: -110
Score: 5.1 Sequence: GCAAATAATTATCATTAAC
Locus tag: YE2476
|
||||
| YE2476 | -110 | 5.1 | GCAAATAATTATCATTAAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: viuB | ||||
| Ortholog function: FAD-binding 9 siderophore-interacting domain protein | ||||
| Serratia proteamaculans 568 | Spro_2919 | -65 | 4.5 | GCAAACAATTCTCATTATC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2023 | -72 | 4.4 | CGAAATGATAATAGTTATC |
| Proteus mirabilis HI4320 | PMI1437 | -66 | 4.6 | AATAGTGATAATGACTATC |
| -60 | 5 | GATAATGACTATCATTATT | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2040 | -97 | 5 | TTTAATGATAATAATTATC |
| -91 | 5.5 | GATAATAATTATCATTTTC | ||
|
Position: -66
Score: 4.7 Sequence: TTCATTGATAATCATTATC
Locus tag: YE2486
|
||||
| YE2486 | -66 | 4.7 | TTCATTGATAATCATTATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fhuF | ||||
| Ortholog function: ferric iron reductase involved in ferric hydroximate transport | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4367 | -122 | 5.1 | GATAATGATAACCAATATC |
| -99 | 4.5 | GATAATTTTTATCATTTGC | ||
| -34 | 4 | AGCAATCATTATCATTTAG | ||
| Salmonella typhimurium LT2 | STM4550 | -238 | 4 | GGAATTGATAATGATAACC |
| -232 | 5.1 | GATAATGATAACCAATATC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03429 | -234 | 4.8 | GATAATGATAACCAATAGC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04821 | -44 | 4.5 | AATATCAGTAATCATTATC |
| -38 | 4.4 | AGTAATCATTATCATTTAG | ||
| Enterobacter sp. 638 | Ent638_0527 | -237 | 5.1 | GATAATGATAACCAATATC |
| Yersinia pestis KIM | y2642 | -67 | 4.9 | GCTATTGATAATCACTATC |
| -61 | 4.4 | GATAATCACTATCATTCTG | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4627 | -100 | 4.3 | GACAATGATAATAATAATA |
| -94 | 5.3 | GATAATAATAATAATTATC | ||
| -88 | 4.9 | AATAATAATTATCATAATT | ||
| -82 | 4.1 | AATTATCATAATTATATTT | ||
|
Position: -41
Score: 4.9 Sequence: GTTAATAAATCTCATTATC
Locus tag: YE2497
|
||||
| YE2497 | -41 | 4.9 | GTTAATAAATCTCATTATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yijD1 | ||||
| Ortholog function: putative iron permease FTR1 | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_02057 | -98 | 5.3 | TATAATGATAATAATTATC |
| -92 | 5 | GATAATAATTATCATTTGT | ||
| Yersinia pestis KIM | y2370 | -47 | 4.1 | GTTAATGTTAATAAATCTC |
| -41 | 4.5 | GTTAATAAATCTCATTATT | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1510 | -41 | 4.7 | GATAATAAGAATAAATATC |
| -35 | 4.2 | AAGAATAAATATCATTTGT | ||
|
Position: -95
Score: 5 Sequence: GATAATGGTTATTATTCAC
Locus tag: YE2615
|
||||
| YE2615 | -95 | 5 | GATAATGGTTATTATTCAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ybtP | ||||
| Ortholog function: yersiniabactin-iron ABC transporter, ATPase/permease components | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_01250 | -191 | 4.4 | GTTATTGATAATGGTTATT |
| -185 | 4.7 | GATAATGGTTATTATTCAC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00913 | -191 | 4.4 | GTTATTGATAATGGTTATT |
| -185 | 4.7 | GATAATGGTTATTATTCAC | ||
| Yersinia pestis KIM | y2397 | -101 | 4.4 | GTTATTGATAATGGTTATT |
| -95 | 4.7 | GATAATGGTTATTATTCAC | ||
|
Position: -215
Score: 5 Sequence: GTGAATAATAACCATTATC
Position: -209
Score: 4.8 Sequence: AATAACCATTATCAATAAC
Locus tag: YE2616
|
||||
| YE2616 | -215 | 5 | GTGAATAATAACCATTATC | |
| -209 | 4.8 | AATAACCATTATCAATAAC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ybtA | ||||
| Ortholog function: AraC-type transcriptional regulator for yersiniabactin uptake and biosynthetic genes | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_00912 | -90 | 4.7 | GTGAATAATAACCATTATC |
| -84 | 4.6 | AATAACCATTATCAATAAC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_01249 | -90 | 4.7 | GTGAATAATAACCATTATC |
| -84 | 4.6 | AATAACCATTATCAATAAC | ||
| Yersinia pestis KIM | y2398 | -90 | 4.7 | GTGAATAATAACCATTATC |
| -84 | 4.6 | AATAACCATTATCAATAAC | ||
|
Position: -74
Score: 4.8 Sequence: AGAAATAGTTATCATTTTC
Locus tag: YE2622
|
||||
| YE2622 | -74 | 4.8 | AGAAATAGTTATCATTTTC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fyuA | ||||
| Ortholog function: TonB-dependent siderophore receptor | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_00905 | -74 | 4.6 | AGAAATAGTTATCATTTTC |
| Citrobacter koseri ATCC BAA-895 | CKO_01243 | -74 | 4.6 | AGAAATAGTTATCATTTTC |
| Yersinia pestis KIM | y2404 | -74 | 4.6 | AGAAATAGTTATCATTTTC |
| Proteus mirabilis HI4320 | PMI2596 | -64 | 4.2 | GCAAATGATATTAATTCGC |
| -58 | 4.4 | GATATTAATTCGCATTAAC | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2316 | -160 | 5.1 | ATTAATGAGAATCATTATC |
| -154 | 4.6 | GAGAATCATTATCAATAGT | ||
|
Position: -172
Score: 4.2 Sequence: AATAATAAGAATGATAATA
Position: -166
Score: 4.1 Sequence: AAGAATGATAATATTTTAT
Locus tag: YE2843
|
||||
| YE2843 | -172 | 4.2 | AATAATAAGAATGATAATA | |
| -166 | 4.1 | AAGAATGATAATATTTTAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dps | ||||
| Ortholog function: DNA protection ferritin-like protein | ||||
| Salmonella typhimurium LT2 | STM0831 | -188 | 4.4 | TAAAATGAGAATTATTACC |
| -136 | 4 | TTTAATCAAAATAAATATT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_02310 | -188 | 4.5 | GTGAATGAGAATTATTAAC |
| -137 | 4.3 | TTTAATCATTTTCAATATT | ||
| Enterobacter sp. 638 | Ent638_1299 | -118 | 4.1 | TAACATTATTATCACTATT |
|
Position: -121
Score: 5 Sequence: TATAATGATAATAGTTATC
Locus tag: YE2924
|
||||
| YE2924 | -121 | 5 | TATAATGATAATAGTTATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gpmA | ||||
| Ortholog function: phosphoglyceromutase 1 | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0755 | -47 | 5 | TATAATGAGAATTATTATC |
| -41 | 4.7 | GAGAATTATTATCATTAAA | ||
| Salmonella typhimurium LT2 | STM0772 | -47 | 5 | TATAATGAGAATTATTATC |
| -41 | 4.5 | GAGAATTATTATCATTACA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_02381 | -46 | 5 | TATAATGAGAATTATTATC |
| -40 | 4.5 | GAGAATTATTATCATTCAA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00768 | -96 | 4.6 | TATAATGAGAATAGTTATC |
| Enterobacter sp. 638 | Ent638_1246 | -164 | 4.7 | TATAATGAGAATTGTTATC |
| -158 | 4.1 | GAGAATTGTTATCATTCAA | ||
| Yersinia pestis KIM | y3048 | -103 | 5.3 | TATAATGATAATAATTATC |
| -97 | 4.6 | GATAATAATTATCATTGAA | ||
| Serratia proteamaculans 568 | Spro_1288 | -51 | 4.9 | TATAATGATTTTCGTTATC |
| Edwardsiella tarda EIB202 | ETAE_2569 | -49 | 4.6 | CATGATGATAATAATTATC |
| -43 | 5.3 | GATAATAATTATCATTATA | ||
|
Position: -53
Score: 4.4 Sequence: ATCAATGATAATGATTACC
Position: -47
Score: 4.4 Sequence: GATAATGATTACCATGCGC
Locus tag: YE3190
|
||||
| YE3190 | -53 | 4.4 | ATCAATGATAATGATTACC | |
| -47 | 4.4 | GATAATGATTACCATGCGC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: Spro_1015 | ||||
| Ortholog function: iron(III) ABC transporter, periplasmic protein | ||||
| Yersinia pestis KIM | y3342 | -41 | 4.2 | ACAAACGATTTTGATTATC |
| -35 | 4.6 | GATTTTGATTATCATTCGC | ||
| Serratia proteamaculans 568 | Spro_1015 | -52 | 4.3 | GCTAATGAGAGTGATTATC |
|
Position: 15
Score: 4.1 Sequence: GATATTAATAAGAAATACC
Locus tag: YE3583
|
||||
| YE3583 | 15 | 4.1 | GATATTAATAAGAAATACC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fecE | ||||
| Ortholog function: iron ABC transporter, ATP-binding protein | ||||
| Yersinia pestis KIM | y4046 | -26 | 4.8 | GGTAATAAAAATCATTAGC |
| -20 | 4.2 | AAAAATCATTAGCATTACT | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2561 | -86 | 4.2 | GCGAATGATAATTAAATTC |
| -80 | 4.1 | GATAATTAAATTCTTTATT | ||
| Proteus mirabilis HI4320 | PMI2960 | -121 | 4.1 | GTGAATTAGTATCATTACT |
|
Position: -64
Score: 4.1 Sequence: AGTAATGCAAATCATTGTC
Locus tag: YE3586
|
||||
| YE3586 | -64 | 4.1 | AGTAATGCAAATCATTGTC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fatB | ||||
| Ortholog function: iron ABC transporter, substrate-binding protein | ||||
| Yersinia pestis KIM | y4043 | -26 | 4.8 | GGTAATAAAAATCATTAGC |
| -20 | 4.2 | AAAAATCATTAGCATTACT | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2564 | -86 | 4.2 | GCGAATGATAATTAAATTC |
| -80 | 4.1 | GATAATTAAATTCTTTATT | ||
| Proteus mirabilis HI4320 | PMI2957 | -121 | 4.1 | GTGAATTAGTATCATTACT |
|
Position: -174
Score: 4.2 Sequence: AGAAATCAGACTCATTAAT
Position: -97
Score: 4.3 Sequence: GAAAACGATTCTTACTATT
Position: -79
Score: 4.3 Sequence: TATTATTTTAATCATTATT
Locus tag: YE3999
|
||||
| YE3999 | -174 | 4.2 | AGAAATCAGACTCATTAAT | |
| -97 | 4.3 | GAAAACGATTCTTACTATT | ||
| -79 | 4.3 | TATTATTTTAATCATTATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: feoA | ||||
| Ortholog function: ferrous iron transport protein A | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3408 | -138 | 3.4 | GcTgATagaAAcCATTcTC |
| -132 | 4.5 | AGAAACCATTCTCATTATC | ||
| Salmonella typhimurium LT2 | STM3505 | -140 | 3.5 | GAagATagaAAcCATTcTC |
| -133 | 4.5 | AGAAACCATTCTCATTATC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04830 | -139 | 4.1 | GATGATAAAAACCATTCTC |
| -133 | 4.7 | AAAAACCATTCTCATTATC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03778 | -133 | 4.1 | GATGATAAAAACCATTCTC |
| -127 | 4.7 | AAAAACCATTCTCATTATC | ||
| Enterobacter sp. 638 | Ent638_3821 | -62 | 4.5 | AGAAACCATTCTCATTATC |
| Yersinia pestis KIM | y3912 | -118 | 4.1 | GAGCATGAAAATAATTCTC |
| -112 | 4.4 | GAAAATAATTCTCAGTATT | ||
| Serratia proteamaculans 568 | Spro_4628 | -155 | 4.3 | GAATACGATAATGATTCTC |
| -149 | 4.9 | GATAATGATTCTCACTATT | ||
| Edwardsiella tarda EIB202 | ETAE_3283 | -163 | 4.3 | GAAAACGATTATCAGTTTT |
| -157 | 4.1 | GATTATCAGTTTTATTATA | ||
| Proteus mirabilis HI4320 | PMI2920 | -138 | 4 | AAAGATGGTTATAATTCTC |
| -132 | 4.3 | GGTTATAATTCTCATTTGC | ||
| -59 | 4.8 | GTTAATAATTATCAGTATC | ||
| -53 | 4.6 | AATTATCAGTATCATTATT | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0209 | -244 | 4 | AATGTTGGTTATTATTCTC |
| -238 | 4.2 | GGTTATTATTCTCATTTGC | ||
|
Position: -127
Score: 5.5 Sequence: GACAATGATAATCATTATC
Position: -121
Score: 5.2 Sequence: GATAATCATTATCACTCTC
Locus tag: YE4024
|
||||
| YE4024 | -127 | 5.5 | GACAATGATAATCATTATC | |
| -121 | 5.2 | GATAATCATTATCACTCTC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yhhY | ||||
| Ortholog function: GCN5-related N-acetyltransferase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3441 | -119 | 4.9 | GACAATAATAATCATTCTC |
| -113 | 4.7 | AATAATCATTCTCATTCGC | ||
| Erwinia amylovora ATCC 49946 | EAM_3278 | -118 | 4.9 | GGCAATAATAATCATTATC |
| -112 | 4.9 | AATAATCATTATCATTCGC | ||
| Serratia proteamaculans 568 | Spro_4654 | -128 | 4.6 | CGCAATAATAATCATTATC |
| -122 | 4.7 | AATAATCATTATCATTCGT | ||
|
Position: -106
Score: 4.9 Sequence: GGCATTGATAATCATTTTC
Position: -100
Score: 5.2 Sequence: GATAATCATTTTCAATATC
Locus tag: YE4138
|
||||
| YE4138 | -106 | 4.9 | GGCATTGATAATCATTTTC | |
| -100 | 5.2 | GATAATCATTTTCAATATC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sodA | ||||
| Ortholog function: manganese/iron superoxide dismutase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3908 | -99 | 4.7 | GGCATTGATAATCATTTTC |
| -93 | 5 | GATAATCATTTTCAATATC | ||
| Salmonella typhimurium LT2 | STM4055 | -99 | 4.7 | GGCATTGATAATCATTTTC |
| -93 | 5 | GATAATCATTTTCAATATC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03093 | -88 | 4.3 | GGCATTGATAAGCATTTTC |
| -82 | 4.4 | GATAAGCATTTTCAATATC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04217 | -88 | 4.3 | GGCATTGATAAGCATTTTC |
| -82 | 4 | GATAAGCATTTTCAATACC | ||
| Enterobacter sp. 638 | Ent638_4063 | -100 | 4.7 | GGCATTGATAATCATTTTC |
| -94 | 5 | GATAATCATTTTCAATATC | ||
| Yersinia pestis KIM | y4080 | -104 | 4.4 | AGGTTTGATAATCATTTTC |
| -98 | 5 | GATAATCATTTTCAATATC | ||
| Serratia proteamaculans 568 | Spro_0081 | -105 | 4.7 | GGCATTGATAATCATTTTC |
| -99 | 5 | GATAATCATTTTCAATATC | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0092 | -105 | 4.9 | AATAATCATTTTCAATATC |
| Proteus mirabilis HI4320 | PMI3036 | -95 | 4.6 | GGATATGATAATGATTTTC |
| -89 | 5.2 | GATAATGATTTTCATTAAC | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0075 | -102 | 4.3 | GGTATTGATAAGCATTTCC |