Propagation of Fur regulog to Yersinia pestis KIM

Reference regulog properties
Source regulog:	Fur - Enterobacteriales
Regulator type:	Transcription factor
Regulator family:	FUR
Regulation mode:	repressor (activator)
Biological process:	Iron homeostasis
Effector:	Iron ion, (Fe2+)
Phylum:	Proteobacteria/gamma
Propagated regulon:
Target genome	Yersinia pestis KIM
Orthologous TF(s)	y1208
Regulated genes	39

Built upon 656 sites [see more]

Predicted regulatory interactions in *Yersinia pestis KIM*
	Locus tag	Position	Score	Sequence
Position: -340 Score: 5.6 Sequence: GATTATGATAATCATTATC Position: -334 Score: 5.2 Sequence: GATAATCATTATCAATAGC Locus tag: y0313
	y0313	-340	5.6	GATTATGATAATCATTATC
		-334	5.2	GATAATCATTATCAATAGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: hasR
Ortholog function: TonB-dependent heme receptor
Erwinia carotovora subsp. atroseptica SCRI1043	ECA1538	-102	5	GGTAATGATTTTTATTATC
		-96	4.8	GATTTTTATTATCATTTTC
		-90	4.1	TATTATCATTTTCATTAAG

Position: -30 Score: 4.2 Sequence: GATAGTCGTTATCATTAAG Locus tag: y0544
	y0544	-30	4.2	GATAGTCGTTATCATTAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: hemP
Ortholog function: hemin uptake protein
Yersinia pestis KIM	y0544	-48	3.7	GATAATGCTTATCACACTG
		-30	4.1	GATAGTCGTTATCATTAAG

Position: -48 Score: 4.6 Sequence: GCTTATGATTATCATTTAA Locus tag: y0547
	y0547	-48	4.6	GCTTATGATTATCATTTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hemN1
Ortholog function: coproporphyrinogen III oxidase, iron utilization
Citrobacter koseri ATCC BAA-895	CKO_02656	-45	4.2	GCGAATGATAATGATGATC
		-39	4.7	GATAATGATGATCATTTAC
Yersinia pestis KIM	y0547	-54	4.1	TCGAATGCTTATGATTATC
		-48	4.4	GCTTATGATTATCATTTAA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA3009	-55	4.2	CCAAATAAAAATAATTATC
		-49	4.6	AAAAATAATTATCATTTAA
Edwardsiella tarda EIB202	ETAE_1793	-59	4.4	TCGAATGATAACTATTATC
		-53	4.4	GATAACTATTATCATTCAA

Position: -157 Score: 4.6 Sequence: CGTTTTAATAATCATTATC Position: -151 Score: 4.9 Sequence: AATAATCATTATCGTTACC Locus tag: y0796
	y0796	-157	4.6	CGTTTTAATAATCATTATC
		-151	4.9	AATAATCATTATCGTTACC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fhuC
Ortholog function: iron-hydroxamate transporter ATP-binding subunit
Escherichia coli str. K-12 substr. MG1655	b0151	-57	4.4	CTTTATAATAATCATTCTC
		-51	4.5	AATAATCATTCTCGTTTAC
Salmonella typhimurium LT2	STM0192	-56	4.8	GGTTATAATAATAATTATC
		-50	4.8	AATAATAATTATCGTTTAC
Citrobacter koseri ATCC BAA-895	CKO_03217	-57	4	GGTCATAAGAATAATTCTC
		-51	4.3	AAGAATAATTCTCGTTTAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_00166	-56	4	CGTCATAATAATAATTCTC
		-50	4.5	AATAATAATTCTCGTTTAC
Enterobacter sp. 638	Ent638_0691	-58	4.3	GGTCATAATAATAATTCTC
		-52	4.5	AATAATAATTCTCGTTTAC
Yersinia pestis KIM	y0796	-157	4.4	CGTTTTAATAATCATTATC
		-151	4.7	AATAATCATTATCGTTACC
Serratia proteamaculans 568	Spro_3978	-60	4.7	GCTTATAATAATTATTATC
		-54	4.7	AATAATTATTATCGTTTAC
Erwinia carotovora subsp. atroseptica SCRI1043	ECA3312	-123	4.3	CTTTATCGTAATCATTATC
		-117	4.5	CGTAATCATTATCGTTCTC

Position: -103 Score: 4.7 Sequence: AGTAATGATAATTGATATC Position: -97 Score: 4.6 Sequence: GATAATTGATATCATTTGC Locus tag: y0850
	y0850	-103	4.7	AGTAATGATAATTGATATC
		-97	4.6	GATAATTGATATCATTTGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: cfrA
Ortholog function: TonB-dependent outer membrane receptor
Citrobacter koseri ATCC BAA-895	CKO_01134	-4	4.8	TGTAATGATAATTATTTTT
		2	5	GATAATTATTTTTATTATC
		8	4.5	TATTTTTATTATCATTTTC
Yersinia pestis KIM	y0850	-103	4.6	AGTAATGATAATTGATATC
		-97	4.4	GATAATTGATATCATTTGC
Erwinia carotovora subsp. atroseptica SCRI1043	ECA2722	-100	4.6	GCAAATGATTTTAATTTTC
		-94	4.3	GATTTTAATTTTCATTTAC

Position: -72 Score: 4.7 Sequence: GATAATTATTCTCATTTAA Locus tag: y1500
	y1500	-72	4.7	GATAATTATTCTCATTTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: mntH
Ortholog function: Mn2+/Fe2+ transporter, NRAMP family
Escherichia coli str. K-12 substr. MG1655	b2392	-68	4.7	GAATTTGATAATCATTCTC
		-62	4.2	GATAATCATTCTCGTTTGG
Salmonella typhimurium LT2	STM2408	-68	4.5	GCACTTGATAATCATTATC
		-62	4.8	GATAATCATTATCAATAAA
Citrobacter koseri ATCC BAA-895	CKO_00404	-50	4.3	GCACTTGATAATCATTCTC
		-44	4.5	GATAATCATTCTCAATAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02743	-68	4.3	GAACTTGATAATCATTCGC
		-62	4.3	GATAATCATTCGCATTTTG
Enterobacter sp. 638	Ent638_2926	-67	4.8	GATCTTGATAATCATTCTC
		-61	4.8	GATAATCATTCTCATTTTG
Yersinia pestis KIM	y1500	-78	4	GCGCTTGATAATTATTCTC
		-72	4.6	GATAATTATTCTCATTTAA
Serratia proteamaculans 568	Spro_3415	-66	4.3	GCACTTGATAATTATTATC
		-60	5.2	GATAATTATTATCATTTAC
Erwinia carotovora subsp. atroseptica SCRI1043	ECA0843	-63	4.5	GCACTTGATAATCATTATC
		-57	5.2	GATAATCATTATCATTTTT
Edwardsiella tarda EIB202	ETAE_1142	-134	4.5	GCAGTTGATAATCATTATC

Position: -108 Score: 5.1 Sequence: AACAATGATAATCATTTTT Position: -102 Score: 4.9 Sequence: GATAATCATTTTTATTACC Locus tag: y1526
	y1526	-108	5.1	AACAATGATAATCATTTTT
		-102	4.9	GATAATCATTTTTATTACC
Supported by regulated orthologs from reference regulons
Ortholog gene name: sfuA
Ortholog function: iron(III) ABC transporter, periplasmic protein
Yersinia pestis KIM	y1526	-108	4.8	AACAATGATAATCATTTTT
		-102	4.7	GATAATCATTTTTATTACC
Erwinia carotovora subsp. atroseptica SCRI1043	ECA3137	-169	4.2	CGAAATAATAATAACTATC
		-163	4.7	AATAATAACTATCATTATT
		-157	4.4	AACTATCATTATTATTATC

Position: -45 Score: 4.2 Sequence: GCTAATGGTATTGATAATC Position: -39 Score: 5.4 Sequence: GGTATTGATAATCATTTTC Position: -33 Score: 4.9 Sequence: GATAATCATTTTCATTTGT Locus tag: y1897
	y1897	-45	4.2	GCTAATGGTATTGATAATC
		-39	5.4	GGTATTGATAATCATTTTC
		-33	4.9	GATAATCATTTTCATTTGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sitA
Ortholog function: iron ABC transporter, periplasmic substrate-binding protein
Salmonella typhimurium LT2	STM2861	-99	4.5	GCAAATAAGAATTATTTTC
		-93	4.2	AAGAATTATTTTCATTTAT
Citrobacter koseri ATCC BAA-895	CKO_04090	-84	4.5	GTAAATAAGAATTATTTTC
		-78	4.2	AAGAATTATTTTCATTTAT
Citrobacter koseri ATCC BAA-895	CKO_00940	-111	4.1	GATAAAGATAATTTTTCTC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_03078	-99	4.5	GCAAATAAGAATTATTTTC
		-93	4.2	AAGAATTATTTTCATTTAT
Enterobacter sp. 638	Ent638_1111	-98	4.9	TTTAATGATAATTATTTTC
		-92	4.5	GATAATTATTTTCATTTAA
Yersinia pestis KIM	y1897	-39	5.2	GGTATTGATAATCATTTTC
		-33	4.7	GATAATCATTTTCATTTGT
Serratia proteamaculans 568	Spro_2133	-41	5.4	GATATTGATAATCATTTTC
		-35	4.6	GATAATCATTTTCATTTGA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA2392	-53	5.1	GATATTGATAATTATTCTC
Proteus mirabilis HI4320	PMI1027	-63	4.2	TGAAATGATATTGATAATC
		-57	5.5	GATATTGATAATCATTATC
Photorhabdus luminescens subsp. laumondii TTO1	plu2672	-49	5.2	GATATTGATAATCGTTATC
		-43	4.5	GATAATCGTTATCATATAC

Position: -129 Score: 4.6 Sequence: TGAAGTGATAATTATTATC Position: -123 Score: 4.9 Sequence: GATAATTATTATCACTACC Locus tag: y1934
	y1934	-129	4.6	TGAAGTGATAATTATTATC
		-123	4.9	GATAATTATTATCACTACC
Supported by regulated orthologs from reference regulons
Ortholog gene name: sufA
Ortholog function: scaffold protein for iron-sulfur cluster assembly
Escherichia coli str. K-12 substr. MG1655	b1684	-65	4.4	TGAACTGATAATCATTATC
		-59	5.1	GATAATCATTATCACTAAC
Salmonella typhimurium LT2	STM1369	-66	4.7	TGAAGTGATAATCATTATC
		-60	5.1	GATAATCATTATCACTAAC
Citrobacter koseri ATCC BAA-895	CKO_01717	-66	4.7	TGAAGTGATAATCATTATC
		-60	5.1	GATAATCATTATCACTAAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02141	-66	4.7	TGAAGTGATAATCATTATC
		-60	5.1	GATAATCATTATCACTAAC
Enterobacter sp. 638	Ent638_1760	-67	4.4	TGAAGTGATAATCGTTATC
		-61	4.7	GATAATCGTTATCACTAAC
Yersinia pestis KIM	y1934	-129	4.5	TGAAGTGATAATTATTATC
		-123	4.8	GATAATTATTATCACTACC
Serratia proteamaculans 568	Spro_2179	-77	4.4	TGAAGTGATAATCGTTATC
		-71	4.7	GATAATCGTTATCACTAAC
Proteus mirabilis HI4320	PMI1416	-66	4.4	GATAAGGGTTATCATTACC
		-60	4	GGTTATCATTACCATTAGA
Photorhabdus luminescens subsp. laumondii TTO1	plu2622	-87	4.4	GATAAAGGTTATCATTACC
		-81	4.3	GGTTATCATTACCATTATA

Position: -41 Score: 4.7 Sequence: GTTAATAAATCTCATTATT Locus tag: y2370
	y2370	-41	4.7	GTTAATAAATCTCATTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yijD1
Ortholog function: putative iron permease FTR1
Citrobacter koseri ATCC BAA-895	CKO_02057	-98	5.3	TATAATGATAATAATTATC
		-92	5	GATAATAATTATCATTTGT
Yersinia pestis KIM	y2370	-47	4.1	GTTAATGTTAATAAATCTC
		-41	4.5	GTTAATAAATCTCATTATT
Erwinia carotovora subsp. atroseptica SCRI1043	ECA1510	-41	4.7	GATAATAAGAATAAATATC
		-35	4.2	AAGAATAAATATCATTTGT

Position: -95 Score: 5 Sequence: GATAATGGTTATTATTCAC Locus tag: y2397
	y2397	-95	5	GATAATGGTTATTATTCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ybtP
Ortholog function: yersiniabactin-iron ABC transporter, ATPase/permease components
Citrobacter koseri ATCC BAA-895	CKO_01250	-191	4.4	GTTATTGATAATGGTTATT
		-185	4.7	GATAATGGTTATTATTCAC
Citrobacter koseri ATCC BAA-895	CKO_00913	-191	4.4	GTTATTGATAATGGTTATT
		-185	4.7	GATAATGGTTATTATTCAC
Yersinia pestis KIM	y2397	-101	4.4	GTTATTGATAATGGTTATT
		-95	4.7	GATAATGGTTATTATTCAC

Position: -90 Score: 5 Sequence: GTGAATAATAACCATTATC Position: -84 Score: 4.8 Sequence: AATAACCATTATCAATAAC Locus tag: y2398
	y2398	-90	5	GTGAATAATAACCATTATC
		-84	4.8	AATAACCATTATCAATAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ybtA
Ortholog function: AraC-type transcriptional regulator for yersiniabactin uptake and biosynthetic genes
Citrobacter koseri ATCC BAA-895	CKO_00912	-90	4.7	GTGAATAATAACCATTATC
		-84	4.6	AATAACCATTATCAATAAC
Citrobacter koseri ATCC BAA-895	CKO_01249	-90	4.7	GTGAATAATAACCATTATC
		-84	4.6	AATAACCATTATCAATAAC
Yersinia pestis KIM	y2398	-90	4.7	GTGAATAATAACCATTATC
		-84	4.6	AATAACCATTATCAATAAC

Position: -63 Score: 5.4 Sequence: GTTAATAATTATTATTATC Locus tag: y2399
	y2399	-63	5.4	GTTAATAATTATTATTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: irp2
Ortholog function: non-ribosomal peptide synthase (siderophore synthase)
Citrobacter koseri ATCC BAA-895	CKO_00911	-63	4.9	GTTAATAATTATTATTCTC
Yersinia pestis KIM	y2399	-63	5.1	GTTAATAATTATTATTATC

Position: -74 Score: 4.8 Sequence: AGAAATAGTTATCATTTTC Locus tag: y2404
	y2404	-74	4.8	AGAAATAGTTATCATTTTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fyuA
Ortholog function: TonB-dependent siderophore receptor
Citrobacter koseri ATCC BAA-895	CKO_00905	-74	4.6	AGAAATAGTTATCATTTTC
Citrobacter koseri ATCC BAA-895	CKO_01243	-74	4.6	AGAAATAGTTATCATTTTC
Yersinia pestis KIM	y2404	-74	4.6	AGAAATAGTTATCATTTTC
Proteus mirabilis HI4320	PMI2596	-64	4.2	GCAAATGATATTAATTCGC
		-58	4.4	GATATTAATTCGCATTAAC
Photorhabdus luminescens subsp. laumondii TTO1	plu2316	-160	5.1	ATTAATGAGAATCATTATC
		-154	4.6	GAGAATCATTATCAATAGT

Position: -84 Score: 4.4 Sequence: CAGAATGATAATCACAATC Position: -78 Score: 4.3 Sequence: GATAATCACAATCGTTTTA Locus tag: y2452
	y2452	-84	4.4	CAGAATGATAATCACAATC
		-78	4.3	GATAATCACAATCGTTTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yijD
Ortholog function: iron permease FTR1
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_01045	-76	5	TGTAATGATAATCACTATC
		-70	4.2	GATAATCACTATCATAAAT
Enterobacter sp. 638	Ent638_1545	-76	4.9	CGTAATGATAATCACTATC
Erwinia amylovora ATCC 49946	EAM_2059	-80	4.6	GATAATGATAATCCCTATC
Yersinia pestis KIM	y2452	-84	4.4	CAGAATGATAATCACAATC
		-78	4.3	GATAATCACAATCGTTTTA
Serratia proteamaculans 568	Spro_2929	-109	4.8	CAGAATGATAATCACTATC

Position: -191 Score: 3.7 Sequence: GTGGATGACTATCATTAAA Position: -178 Score: 4 Sequence: ATTAAACAGACTCATTCTC Position: -126 Score: 4.2 Sequence: ACCAATAGGAATCATTATC Position: -120 Score: 4.1 Sequence: AGGAATCATTATCTTTAGT Position: -93 Score: 4.5 Sequence: AATAATGTGAATGATTATC Position: -87 Score: 4.2 Sequence: GTGAATGATTATCATGATG Position: -70 Score: 3.4 Sequence: TGCTTTGGTATTTATTTTC Position: -64 Score: 4.2 Sequence: GGTATTTATTTTCATTTAA Locus tag: y2524
	y2524	-191	3.7	GTGGATGACTATCATTAAA
		-178	4	ATTAAACAGACTCATTCTC
		-126	4.2	ACCAATAGGAATCATTATC
		-120	4.1	AGGAATCATTATCTTTAGT
		-93	4.5	AATAATGTGAATGATTATC
		-87	4.2	GTGAATGATTATCATGATG
		-70	3.4	TGCTTTGGTATTTATTTTC
		-64	4.2	GGTATTTATTTTCATTTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ftnA
Ortholog function: ferritin
Escherichia coli str. K-12 substr. MG1655	b1905	-127	3.4	GgTAATGcgttTtATTccC
		-121	3	GcgttTtATtccCATTcgt
Salmonella typhimurium LT2	STM1935	-100	4	AATAATTAAATTTAATATT
Citrobacter koseri ATCC BAA-895	CKO_01042	-97	4.3	AATAATTAAATTTATTATT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02402	-161	4	ATAAATTAAAAGCATTCTC
		-155	3.8	TAAAAGCATTCTCATTTAT
Enterobacter sp. 638	Ent638_2486	-103	3.7	TATTTTAATAAATAATATC
		-97	3.6	AATAAATAATATCTTTATT
Erwinia amylovora ATCC 49946	EAM_2940	-131	4.4	TGGAATGATTATCAATTAC
Yersinia pestis KIM	y2524	-93	4.4	AATAATGTGAATGATTATC
		-87	4.1	GTGAATGATTATCATGATG
Serratia proteamaculans 568	Spro_1942	-174	4.5	GAAAATAGTTATCATAATT
		-168	4	AGTTATCATAATTATTTAA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA2473	-158	4.6	TTAAATGATAATGAATATC
		-152	4.8	GATAATGAATATCAATAGC
Proteus mirabilis HI4320	PMI1007	-184	4.7	GTTAATGATAATCAATTCC
		-178	4.1	GATAATCAATTCCATTAAT
Photorhabdus luminescens subsp. laumondii TTO1	plu2689	-147	4.4	TTAAATGAGATTCATTTTC
		-141	4.4	GAGATTCATTTTCATTTTT

Position: -67 Score: 5 Sequence: GCTATTGATAATCACTATC Position: -61 Score: 4.6 Sequence: GATAATCACTATCATTCTG Locus tag: y2642
	y2642	-67	5	GCTATTGATAATCACTATC
		-61	4.6	GATAATCACTATCATTCTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: fhuF
Ortholog function: ferric iron reductase involved in ferric hydroximate transport
Escherichia coli str. K-12 substr. MG1655	b4367	-122	5.1	GATAATGATAACCAATATC
		-99	4.5	GATAATTTTTATCATTTGC
		-34	4	AGCAATCATTATCATTTAG
Salmonella typhimurium LT2	STM4550	-238	4	GGAATTGATAATGATAACC
		-232	5.1	GATAATGATAACCAATATC
Citrobacter koseri ATCC BAA-895	CKO_03429	-234	4.8	GATAATGATAACCAATAGC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_04821	-44	4.5	AATATCAGTAATCATTATC
		-38	4.4	AGTAATCATTATCATTTAG
Enterobacter sp. 638	Ent638_0527	-237	5.1	GATAATGATAACCAATATC
Yersinia pestis KIM	y2642	-67	4.9	GCTATTGATAATCACTATC
		-61	4.4	GATAATCACTATCATTCTG
Photorhabdus luminescens subsp. laumondii TTO1	plu4627	-100	4.3	GACAATGATAATAATAATA
		-94	5.3	GATAATAATAATAATTATC
		-88	4.9	AATAATAATTATCATAATT
		-82	4.1	AATTATCATAATTATATTT

Position: -45 Score: 4.4 Sequence: CTTATTGATAAGTATTATC Position: -39 Score: 4.7 Sequence: GATAAGTATTATCATTTGC Locus tag: y2875
	y2875	-45	4.4	CTTATTGATAAGTATTATC
		-39	4.7	GATAAGTATTATCATTTGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yiuA
Ortholog function: siderophore ABC transporter, substrate binding periplasmic protein
Yersinia pestis KIM	y2875	-45	4.3	CTTATTGATAAGTATTATC
		-39	4.5	GATAAGTATTATCATTTGC
Photorhabdus luminescens subsp. laumondii TTO1	plu2853	-78	4.3	CATATTGATAAGTATTCTC
		-72	4	GATAAGTATTCTCATTTGT

Position: -103 Score: 5.4 Sequence: TATAATGATAATAATTATC Position: -97 Score: 4.7 Sequence: GATAATAATTATCATTGAA Locus tag: y3048
	y3048	-103	5.4	TATAATGATAATAATTATC
		-97	4.7	GATAATAATTATCATTGAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gpmA
Ortholog function: phosphoglyceromutase 1
Escherichia coli str. K-12 substr. MG1655	b0755	-47	5	TATAATGAGAATTATTATC
		-41	4.7	GAGAATTATTATCATTAAA
Salmonella typhimurium LT2	STM0772	-47	5	TATAATGAGAATTATTATC
		-41	4.5	GAGAATTATTATCATTACA
Citrobacter koseri ATCC BAA-895	CKO_02381	-46	5	TATAATGAGAATTATTATC
		-40	4.5	GAGAATTATTATCATTCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_00768	-96	4.6	TATAATGAGAATAGTTATC
Enterobacter sp. 638	Ent638_1246	-164	4.7	TATAATGAGAATTGTTATC
		-158	4.1	GAGAATTGTTATCATTCAA
Yersinia pestis KIM	y3048	-103	5.3	TATAATGATAATAATTATC
		-97	4.6	GATAATAATTATCATTGAA
Serratia proteamaculans 568	Spro_1288	-51	4.9	TATAATGATTTTCGTTATC
Edwardsiella tarda EIB202	ETAE_2569	-49	4.6	CATGATGATAATAATTATC
		-43	5.3	GATAATAATTATCATTATA

Position: -41 Score: 4.3 Sequence: ACAAACGATTTTGATTATC Position: -35 Score: 4.9 Sequence: GATTTTGATTATCATTCGC Locus tag: y3342
	y3342	-41	4.3	ACAAACGATTTTGATTATC
		-35	4.9	GATTTTGATTATCATTCGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: Spro_1015
Ortholog function: iron(III) ABC transporter, periplasmic protein
Yersinia pestis KIM	y3342	-41	4.2	ACAAACGATTTTGATTATC
		-35	4.6	GATTTTGATTATCATTCGC
Serratia proteamaculans 568	Spro_1015	-52	4.3	GCTAATGAGAGTGATTATC

Position: -63 Score: 5 Sequence: GATAATGATAACCACTATT Locus tag: y3380
	y3380	-63	5	GATAATGATAACCACTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: iucA2
Ortholog function: aerobactin synthetase (subunit alpha)
Yersinia pestis KIM	y3380	-63	4.8	GATAATGATAACCACTATT
Yersinia pestis KIM	y3381	-63	4.8	GATAATGATAACCACTATT
Serratia proteamaculans 568	Spro_0922	-63	4.2	GATAACAATAAATATTATT
		-45	4.1	TGATATAAGAATCATTCTC

Position: -187 Score: 5 Sequence: GAAAATGATAATCGTTTGC Locus tag: y3404
	y3404	-187	5	GAAAATGATAATCGTTTGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: y3404
Ortholog function: TonB-dependent receptor
Yersinia pestis KIM	y3404	-187	4.9	GAAAATGATAATCGTTTGC

Position: -71 Score: 4.9 Sequence: ACTAATGATAATTACTATC Locus tag: y3495
	y3495	-71	4.9	ACTAATGATAATTACTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: exbB
Ortholog function: TonB-dependent siderophore transporter component ExbB
Escherichia coli str. K-12 substr. MG1655	b3006	-82	4.1	AGTAATGAGAACGACTATC
Salmonella typhimurium LT2	STM3159	-82	4.1	AGTAATGAGAACGACTATC
Citrobacter koseri ATCC BAA-895	CKO_04401	-97	4.1	AGTAATGAGAACGACTATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_03426	-97	4.3	ACTAATGAGAACCACTATC
Enterobacter sp. 638	Ent638_3417	-97	4.3	ACTAATGAGAACCACTATC
Yersinia pestis KIM	y3495	-71	4.8	ACTAATGATAATTACTATC
Serratia proteamaculans 568	Spro_4211	-94	4.4	AATAATGAGAACTACTATC
Erwinia carotovora subsp. atroseptica SCRI1043	ECA0358	-206	4.3	AATAATGAGAACGACTATC
Proteus mirabilis HI4320	PMI0029	-170	4.8	AGTAATGATAATTACTATC
Photorhabdus luminescens subsp. laumondii TTO1	plu3941	-98	5.1	AATAATGATAATTACTATC

Position: -118 Score: 4.2 Sequence: GAGCATGAAAATAATTCTC Position: -112 Score: 4.5 Sequence: GAAAATAATTCTCAGTATT Locus tag: y3912
	y3912	-118	4.2	GAGCATGAAAATAATTCTC
		-112	4.5	GAAAATAATTCTCAGTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: feoA
Ortholog function: ferrous iron transport protein A
Escherichia coli str. K-12 substr. MG1655	b3408	-138	3.4	GcTgATagaAAcCATTcTC
		-132	4.5	AGAAACCATTCTCATTATC
Salmonella typhimurium LT2	STM3505	-140	3.5	GAagATagaAAcCATTcTC
		-133	4.5	AGAAACCATTCTCATTATC
Citrobacter koseri ATCC BAA-895	CKO_04830	-139	4.1	GATGATAAAAACCATTCTC
		-133	4.7	AAAAACCATTCTCATTATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_03778	-133	4.1	GATGATAAAAACCATTCTC
		-127	4.7	AAAAACCATTCTCATTATC
Enterobacter sp. 638	Ent638_3821	-62	4.5	AGAAACCATTCTCATTATC
Yersinia pestis KIM	y3912	-118	4.1	GAGCATGAAAATAATTCTC
		-112	4.4	GAAAATAATTCTCAGTATT
Serratia proteamaculans 568	Spro_4628	-155	4.3	GAATACGATAATGATTCTC
		-149	4.9	GATAATGATTCTCACTATT
Edwardsiella tarda EIB202	ETAE_3283	-163	4.3	GAAAACGATTATCAGTTTT
		-157	4.1	GATTATCAGTTTTATTATA
Proteus mirabilis HI4320	PMI2920	-138	4	AAAGATGGTTATAATTCTC
		-132	4.3	GGTTATAATTCTCATTTGC
		-59	4.8	GTTAATAATTATCAGTATC
		-53	4.6	AATTATCAGTATCATTATT
Photorhabdus luminescens subsp. laumondii TTO1	plu0209	-244	4	AATGTTGGTTATTATTCTC
		-238	4.2	GGTTATTATTCTCATTTGC

Position: -331 Score: 4.1 Sequence: TGAAATAAAACTCATTCTT Position: -325 Score: 4 Sequence: AAAACTCATTCTTATTTAC Locus tag: y3988
	y3988	-331	4.1	TGAAATAAAACTCATTCTT
		-325	4	AAAACTCATTCTTATTTAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: bfr
Ortholog function: bacterioferrin
Yersinia pestis KIM	y3988	-332	3.9	tgaAATaAaAcTCATTcTt
		-326	3.6	aAaAcTcATtcTtATTtaC

Position: -26 Score: 5 Sequence: GGTAATAAAAATCATTAGC Position: -20 Score: 4.5 Sequence: AAAAATCATTAGCATTACT Locus tag: y4043
	y4043	-26	5	GGTAATAAAAATCATTAGC
		-20	4.5	AAAAATCATTAGCATTACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fatB
Ortholog function: iron ABC transporter, substrate-binding protein
Yersinia pestis KIM	y4043	-26	4.8	GGTAATAAAAATCATTAGC
		-20	4.2	AAAAATCATTAGCATTACT
Erwinia carotovora subsp. atroseptica SCRI1043	ECA2564	-86	4.2	GCGAATGATAATTAAATTC
		-80	4.1	GATAATTAAATTCTTTATT
Proteus mirabilis HI4320	PMI2957	-121	4.1	GTGAATTAGTATCATTACT

Position: -104 Score: 4.6 Sequence: AGGTTTGATAATCATTTTC Position: -98 Score: 5.2 Sequence: GATAATCATTTTCAATATC Locus tag: y4080
	y4080	-104	4.6	AGGTTTGATAATCATTTTC
		-98	5.2	GATAATCATTTTCAATATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: sodA
Ortholog function: manganese/iron superoxide dismutase
Escherichia coli str. K-12 substr. MG1655	b3908	-99	4.7	GGCATTGATAATCATTTTC
		-93	5	GATAATCATTTTCAATATC
Salmonella typhimurium LT2	STM4055	-99	4.7	GGCATTGATAATCATTTTC
		-93	5	GATAATCATTTTCAATATC
Citrobacter koseri ATCC BAA-895	CKO_03093	-88	4.3	GGCATTGATAAGCATTTTC
		-82	4.4	GATAAGCATTTTCAATATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_04217	-88	4.3	GGCATTGATAAGCATTTTC
		-82	4	GATAAGCATTTTCAATACC
Enterobacter sp. 638	Ent638_4063	-100	4.7	GGCATTGATAATCATTTTC
		-94	5	GATAATCATTTTCAATATC
Yersinia pestis KIM	y4080	-104	4.4	AGGTTTGATAATCATTTTC
		-98	5	GATAATCATTTTCAATATC
Serratia proteamaculans 568	Spro_0081	-105	4.7	GGCATTGATAATCATTTTC
		-99	5	GATAATCATTTTCAATATC
Erwinia carotovora subsp. atroseptica SCRI1043	ECA0092	-105	4.9	AATAATCATTTTCAATATC
Proteus mirabilis HI4320	PMI3036	-95	4.6	GGATATGATAATGATTTTC
		-89	5.2	GATAATGATTTTCATTAAC
Photorhabdus luminescens subsp. laumondii TTO1	plu0075	-102	4.3	GGTATTGATAAGCATTTCC

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of Fur regulog to Yersinia pestis KIM

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --