Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Fur regulog to Paenibacillus larvae subsp. larvae BRL-230010

Reference regulog properties
Source regulog: Fur - Bacillales
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Firmicutes
Propagated regulon:
Target genome Paenibacillus larvae subsp. larvae BRL-230010
Orthologous TF(s) Plarl_010100001233
Regulated genes 9
Built upon 200 sites [see more]
Predicted regulatory interactions in Paenibacillus larvae subsp. larvae BRL-230010
Locus tag Position Score Sequence
Position: -96
Score: 6.7
Sequence: ATTGATAATGATTATCATT
Position: -90
Score: 6.4
Sequence: AATGATTATCATTATCAAT
Locus tag: Plarl_010100003185
Plarl_010100003185 -96 6.7 ATTGATAATGATTATCATT
-90 6.4 AATGATTATCATTATCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: dhbA
Ortholog function: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28)
Bacillus subtilis subsp. subtilis str. 168 BSU32000 -121 4.6 TATGATTATTTTTATAATT
-99 6.7 AATGATAATCATTATCAAT
Bacillus amyloliquefaciens FZB42 RBAM_029050 -53 6.7 AATGATAATCATTATCAAT
Bacillus licheniformis DSM 13 BLi03902 -88 6.4 AATGATTATCATTATCAAT
Bacillus cereus ATCC 14579 BC2302 -158 6 AATGAAAAACATTATCAAT
-64 6.2 AATGAAAATCAATATCATT
Oceanobacillus iheyensis HTE831 OB0954 -107 6.7 AATGATAATCATTATCATT
-37 6.4 ATTGAGAATGATTATCAAT
Position: -69
Score: 6.4
Sequence: TTTGATAATGATTATCAAT
Locus tag: Plarl_010100003975
Plarl_010100003975 -69 6.4 TTTGATAATGATTATCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: besA
Ortholog function: Trilactone hydrolase [bacillibactin] siderophore
Bacillus subtilis subsp. subtilis str. 168 BSU32010 -57 5.9 AGTGAAAATCATTATCATA
Bacillus amyloliquefaciens FZB42 RBAM_029060 -61 6.5 ATTGAAAATCATTATCAAT
Bacillus licheniformis DSM 13 BLi03903 -302 5.1 TATCATTATGATTTTCATT
-41 6.1 ATTGATAATAGTTATCAAT
Position: -92
Score: 5.8
Sequence: AGTGATATTGATAATCATT
Position: -86
Score: 5.9
Sequence: ATTGATAATCATTTTCACA
Locus tag: Plarl_010100006090
Plarl_010100006090 -92 5.8 AGTGATATTGATAATCATT
-86 5.9 ATTGATAATCATTTTCACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yfhC
Ortholog function: Putative nitroreductase family protein
Bacillus subtilis subsp. subtilis str. 168 BSU08480 -40 6.5 AATGATAATCATTTTCAAT
Bacillus amyloliquefaciens FZB42 RBAM_008550 -40 6.5 AATGATAATCATTTTCATT
Bacillus pumilus SAFR-032 BPUM_0791 -45 5.9 AATGAGAATCAATTTCAAT
Bacillus licheniformis DSM 13 BLi00873 -33 6.5 AATGATAATCATTTTCATT
Bacillus cereus ATCC 14579 BC0786 -67 6.2 ATTGAAAATCAATATCAAT
Bacillus halodurans C-125 BH0303 -91 6.1 TTTGAAAATGATTATCATT
Bacillus clausii KSM-K16 ABC0928 -80 5.6 AATGAAAATGAGAATCATT
Oceanobacillus iheyensis HTE831 OB0528 -41 6.5 ATTGATAATAATTATCAAT
Position: -67
Score: 6.2
Sequence: AATGATAATCTTTATCAAT
Locus tag: Plarl_010100008140
Plarl_010100008140 -67 6.2 AATGATAATCTTTATCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yetG
Ortholog function: Putative monooxygenase
Bacillus amyloliquefaciens FZB42 RBAM_007300 -47 5.8 TTTGAGAATCATTTTCATT
Bacillus cereus ATCC 14579 BC2969 -65 5.9 ATTGAAAATAATTATCATA
-59 4.8 AATAATTATCATAATCAAC
Bacillus halodurans C-125 BH3883 -54 6 TTTGATAATGATAATCAAT
-48 6 AATGATAATCAATATCAAA
Bacillus clausii KSM-K16 ABC1946 -52 6 AATGAGAATCGTTATCAAT
Position: -44
Score: 6.5
Sequence: ATTGAAAATGATTATCATT
Position: -38
Score: 6.4
Sequence: AATGATTATCATTATCAAT
Locus tag: Plarl_010100011781
Plarl_010100011781 -44 6.5 ATTGAAAATGATTATCATT
-38 6.4 AATGATTATCATTATCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: feoA
Ortholog function: Ferrous iron uptake system protein A
Bacillus licheniformis DSM 13 BLi04266 -42 5.9 TATGATAACGATTATCATT
Anoxybacillus flavithermus WK1 Aflv_0305 -38 5.6 ATTGAAAAAGGTTATCATT
Geobacillus kaustophilus HTA426 GK1849 -59 4.8 ATTGAGAAAAAGAATCATT
Bacillus cereus ATCC 14579 BC4807 -39 5.9 TTTGAAAATAATTATCATT
Position: -47
Score: 6.1
Sequence: ACTGAGAATGATTATCAAT
Locus tag: Plarl_010100012809
Plarl_010100012809 -47 6.1 ACTGAGAATGATTATCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: feuA
Ortholog function: Fe3+-bacillibactin ABC transporter substrate-binding protein
Bacillus cereus ATCC 14579 BC3738 -192 6.2 AACGATAATCATTATCAAT
-176 6 AATGAAAATGATTATCAAG
Position: -38
Score: 6.5
Sequence: AATGAAAATCATTATCAAT
Locus tag: Plarl_010100015759
Plarl_010100015759 -38 6.5 AATGAAAATCATTATCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ykuP
Ortholog function: Flavodoxin
Bacillus pumilus SAFR-032 BPUM_1314 -75 6.5 AATGAAAATCATTATCATT
-38 6.5 ATTGAAAATGATTATCATT
Anoxybacillus flavithermus WK1 Aflv_1475 -72 6.1 AAAGATAATCATTATCATT
-41 6 GTTGAAAATGATTATCAAT
Bacillus cereus ATCC 14579 BC1376 -240 5.9 ATTGATAATCAATGTCAAT
-202 6.5 ATTGATAATTATTATCAAT
Paenibacillus sp. JDR-2 Pjdr2_0482 -315 5.5 ATTGAGAATGGTTATCATG
-285 6.4 ACTGATAATCATTATCAAT