Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of HutC regulog to Burkholderia graminis C4D1M

Reference regulog properties
Source regulog: HutC - Ralstonia
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process: Histidine utilization
Effector: cis-Urocanic acid
Phylum: Proteobacteria
Propagated regulon:
Target genome Burkholderia graminis C4D1M
Orthologous TF(s) BgramDRAFT_5795
Regulated genes 1
Built upon 22 sites [see more]
Predicted regulatory interactions in Burkholderia graminis C4D1M
Locus tag Position Score Sequence
Position: -200
Score: 4.9
Sequence: GAAGGTGTATATACAAGCTA
Position: -63
Score: 5.1
Sequence: CAAGTTGTATATACAAGCCG
Position: -26
Score: 5.3
Sequence: GAAATTGTATAGACAGGACA
Locus tag: BgramDRAFT_4563
BgramDRAFT_4563 -200 4.9 GAAGGTGTATATACAAGCTA
-63 5.1 CAAGTTGTATATACAAGCCG
-26 5.3 GAAATTGTATAGACAGGACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hutH
Ortholog function: Histidine ammonia-lyase (EC 4.3.1.3)
Ralstonia solanacearum GMI1000 RSc2646 -53 5.9 TTATTTGTATATACAACATA
Ralstonia pickettii 12J Rpic_2880 -60 6.3 TAAGTTGTATATACAACATA
Ralstonia metallidurans CH34 Rmet_5047 -88 4.9 CAACTTGTCTATACAATACT
Ralstonia metallidurans CH34 Rmet_2855 -59 5.4 TAACCTGTATAGACAGGCCC
Ralstonia eutropha JMP134 Reut_A2716 -40 6.2 TAAGCTGTATAGACAGGAAC
Ralstonia eutropha JMP134 Reut_B5637 -94 5.8 ATGCTTGTATATACAACACT
Ralstonia eutropha H16 H16_A3018 -26 6.2 TAAGCTGTATAGACAGGAAC
Cupriavidus taiwanensis RALTA_A2492 -26 6.2 TAAGCTGTATAGACAGGAAC
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