Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of HutC regulog to Ralstonia pickettii 12D

Reference regulog properties
Source regulog: HutC - Ralstonia
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process: Histidine utilization
Effector: cis-Urocanic acid
Phylum: Proteobacteria
Propagated regulon:
Target genome Ralstonia pickettii 12D
Orthologous TF(s) Rpic12D_2476
Regulated genes 3
Built upon 22 sites [see more]
Predicted regulatory interactions in Ralstonia pickettii 12D
Locus tag Position Score Sequence
Position: -126
Score: 5.7
Sequence: CATGATGTATATACAACAAC
Locus tag: Rpic12D_0905
Rpic12D_0905 -126 5.7 CATGATGTATATACAACAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: hisT
Ortholog function: Histidine transport protein (permease)
Ralstonia pickettii 12J Rpic_0834 -126 5.7 CATGATGTATATACAACAAC
Ralstonia metallidurans CH34 Rmet_5046 -88 4.9 CAACTTGTCTATACAATACT
Ralstonia eutropha JMP134 Reut_B5638 -94 5.8 ATGCTTGTATATACAACACT
Position: -60
Score: 6.3
Sequence: TAAGTTGTATATACAACATA
Locus tag: Rpic12D_2475
Rpic12D_2475 -60 6.3 TAAGTTGTATATACAACATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hutU
Ortholog function: Urocanate hydratase (EC 4.2.1.49)
Ralstonia solanacearum GMI1000 RSc2647 -53 5.9 TTATTTGTATATACAACATA
Ralstonia pickettii 12J Rpic_2881 -60 6.3 TAAGTTGTATATACAACATA
Ralstonia metallidurans CH34 Rmet_5048 -88 4.9 CAACTTGTCTATACAATACT
Ralstonia metallidurans CH34 Rmet_2854 -59 5.4 TAACCTGTATAGACAGGCCC
Ralstonia eutropha JMP134 Reut_A2715 -40 6.2 TAAGCTGTATAGACAGGAAC
Ralstonia eutropha JMP134 Reut_B5636 -94 5.8 ATGCTTGTATATACAACACT
Ralstonia eutropha JMP134 Reut_A0896 -94 5.8 ATGCTTGTATATACAACACT
Ralstonia eutropha H16 H16_A0695 -83 5.6 ATGCCTGTATATACAGGACT
Ralstonia eutropha H16 H16_A3017 -26 6.2 TAAGCTGTATAGACAGGAAC
Cupriavidus taiwanensis RALTA_A0654 -83 5.8 GCACTTGTATATACAGGAAT
Cupriavidus taiwanensis RALTA_A2491 -26 6.2 TAAGCTGTATAGACAGGAAC
Position: -114
Score: 5.4
Sequence: TATGTTGTATATACAACTTA
Locus tag: Rpic12D_2476
Rpic12D_2476 -114 5.4 TATGTTGTATATACAACTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hutC
Ortholog function: Histidine utilization repressor, GntR family
Ralstonia solanacearum GMI1000 RSc2648 -99 5.1 TATGTTGTATATACAAATAA
Ralstonia pickettii 12J Rpic_2882 -114 5.4 TATGTTGTATATACAACTTA
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