Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of HutC regulog to Burkholderia sp. H160

Reference regulog properties
Source regulog: HutC - Ralstonia
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process: Histidine utilization
Effector: cis-Urocanic acid
Phylum: Proteobacteria
Propagated regulon:
Target genome Burkholderia sp. H160
Orthologous TF(s) BH160DRAFT_1528
Regulated genes 1
Built upon 22 sites [see more]
Predicted regulatory interactions in Burkholderia sp. H160
Locus tag Position Score Sequence
Position: -218
Score: 5.1
Sequence: GAAGGTGTATATACAAGTAT
Position: -64
Score: 6
Sequence: GAAGTTGTATATACAAGACT
Position: -26
Score: 5.4
Sequence: GAACTTGTATAGACAGGACG
Locus tag: BH160DRAFT_4159
BH160DRAFT_4159 -218 5.1 GAAGGTGTATATACAAGTAT
-64 6 GAAGTTGTATATACAAGACT
-26 5.4 GAACTTGTATAGACAGGACG
Supported by regulated orthologs from reference regulons
Ortholog gene name: hutH
Ortholog function: Histidine ammonia-lyase (EC 4.3.1.3)
Ralstonia solanacearum GMI1000 RSc2646 -53 5.9 TTATTTGTATATACAACATA
Ralstonia pickettii 12J Rpic_2880 -60 6.3 TAAGTTGTATATACAACATA
Ralstonia metallidurans CH34 Rmet_5047 -88 4.9 CAACTTGTCTATACAATACT
Ralstonia metallidurans CH34 Rmet_2855 -59 5.4 TAACCTGTATAGACAGGCCC
Ralstonia eutropha JMP134 Reut_A2716 -40 6.2 TAAGCTGTATAGACAGGAAC
Ralstonia eutropha JMP134 Reut_B5637 -94 5.8 ATGCTTGTATATACAACACT
Ralstonia eutropha H16 H16_A3018 -26 6.2 TAAGCTGTATAGACAGGAAC
Cupriavidus taiwanensis RALTA_A2492 -26 6.2 TAAGCTGTATAGACAGGAAC
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