Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of HutC regulog to Ralstonia eutropha JMP134

Reference regulog properties
Source regulog: HutC - Ralstonia
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process: Histidine utilization
Effector: cis-Urocanic acid
Phylum: Proteobacteria
Propagated regulon:
Target genome Ralstonia eutropha JMP134
Orthologous TF(s) Reut_A0895, Reut_A2717
Regulated genes 4
Built upon 22 sites [see more]
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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

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Predicted regulatory interactions in Ralstonia eutropha JMP134
Locus tag Position Score Sequence
Position: -94
Score: 5.8
Sequence: ATGCTTGTATATACAACACT
Locus tag: Reut_A0896
Reut_A0896 -94 5.8 ATGCTTGTATATACAACACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hutU
Ortholog function: Urocanate hydratase (EC 4.2.1.49)
Ralstonia solanacearum GMI1000 RSc2647 -53 5.9 TTATTTGTATATACAACATA
Ralstonia pickettii 12J Rpic_2881 -60 6.3 TAAGTTGTATATACAACATA
Ralstonia metallidurans CH34 Rmet_5048 -88 4.9 CAACTTGTCTATACAATACT
Ralstonia metallidurans CH34 Rmet_2854 -59 5.4 TAACCTGTATAGACAGGCCC
Ralstonia eutropha JMP134 Reut_A2715 -40 6.2 TAAGCTGTATAGACAGGAAC
Ralstonia eutropha JMP134 Reut_B5636 -94 5.8 ATGCTTGTATATACAACACT
Ralstonia eutropha JMP134 Reut_A0896 -94 5.8 ATGCTTGTATATACAACACT
Ralstonia eutropha H16 H16_A0695 -83 5.6 ATGCCTGTATATACAGGACT
Ralstonia eutropha H16 H16_A3017 -26 6.2 TAAGCTGTATAGACAGGAAC
Cupriavidus taiwanensis RALTA_A0654 -83 5.8 GCACTTGTATATACAGGAAT
Cupriavidus taiwanensis RALTA_A2491 -26 6.2 TAAGCTGTATAGACAGGAAC
Position: -40
Score: 6.2
Sequence: TAAGCTGTATAGACAGGAAC
Locus tag: Reut_A2716
Reut_A2716 -40 6.2 TAAGCTGTATAGACAGGAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: hutH
Ortholog function: Histidine ammonia-lyase (EC 4.3.1.3)
Ralstonia solanacearum GMI1000 RSc2646 -53 5.9 TTATTTGTATATACAACATA
Ralstonia pickettii 12J Rpic_2880 -60 6.3 TAAGTTGTATATACAACATA
Ralstonia metallidurans CH34 Rmet_5047 -88 4.9 CAACTTGTCTATACAATACT
Ralstonia metallidurans CH34 Rmet_2855 -59 5.4 TAACCTGTATAGACAGGCCC
Ralstonia eutropha JMP134 Reut_A2716 -40 6.2 TAAGCTGTATAGACAGGAAC
Ralstonia eutropha JMP134 Reut_B5637 -94 5.8 ATGCTTGTATATACAACACT
Ralstonia eutropha H16 H16_A3018 -26 6.2 TAAGCTGTATAGACAGGAAC
Cupriavidus taiwanensis RALTA_A2492 -26 6.2 TAAGCTGTATAGACAGGAAC
Position: -94
Score: 5.7
Sequence: TGACTTGTATATACAGGATT
Locus tag: Reut_A2720
Reut_A2720 -94 5.7 TGACTTGTATATACAGGATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hisX
Ortholog function: Histidine ABC transporter, histidine-binding protein (TC 3.A.1)
Ralstonia metallidurans CH34 Rmet_2859 -271 5.8 CTTGTTGTATATACAGCAAT
-114 5.1 TGACTTGTATATACAGCGTT
Ralstonia eutropha JMP134 Reut_A2720 -249 5 ACTCCTGTCTATACAGCAAC
-94 5.7 TGACTTGTATATACAGGATT