Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of HutC regulog to Burkholderia pseudomallei S13

Reference regulog properties
Source regulog: HutC - Ralstonia
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process: Histidine utilization
Effector: cis-Urocanic acid
Phylum: Proteobacteria
Propagated regulon:
Target genome Burkholderia pseudomallei S13
Orthologous TF(s) No orthologous TFs found
Regulated genes 2
Built upon 22 sites [see more]
Predicted regulatory interactions in Burkholderia pseudomallei S13
Locus tag Position Score Sequence
Position: -70
Score: 5.5
Sequence: CAAGTTGTCTATACAACATC
Position: -25
Score: 5.9
Sequence: AAACTTGTATAGACAGGACC
Locus tag: BpseS_03001493
BpseS_03001493 -70 5.5 CAAGTTGTCTATACAACATC
-25 5.9 AAACTTGTATAGACAGGACC
Supported by regulated orthologs from reference regulons
Ortholog gene name: hutH
Ortholog function: Histidine ammonia-lyase (EC 4.3.1.3)
Ralstonia solanacearum GMI1000 RSc2646 -53 5.9 TTATTTGTATATACAACATA
Ralstonia pickettii 12J Rpic_2880 -60 6.3 TAAGTTGTATATACAACATA
Ralstonia metallidurans CH34 Rmet_5047 -88 4.9 CAACTTGTCTATACAATACT
Ralstonia metallidurans CH34 Rmet_2855 -59 5.4 TAACCTGTATAGACAGGCCC
Ralstonia eutropha JMP134 Reut_A2716 -40 6.2 TAAGCTGTATAGACAGGAAC
Ralstonia eutropha JMP134 Reut_B5637 -94 5.8 ATGCTTGTATATACAACACT
Ralstonia eutropha H16 H16_A3018 -26 6.2 TAAGCTGTATAGACAGGAAC
Cupriavidus taiwanensis RALTA_A2492 -26 6.2 TAAGCTGTATAGACAGGAAC
Position: -79
Score: 5
Sequence: CAAGTTGTCTATACAACTTC
Locus tag: BpseS_03002573
BpseS_03002573 -79 5 CAAGTTGTCTATACAACTTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: hisT
Ortholog function: Histidine transport protein (permease)
Ralstonia pickettii 12J Rpic_0834 -126 5.7 CATGATGTATATACAACAAC
Ralstonia metallidurans CH34 Rmet_5046 -88 4.9 CAACTTGTCTATACAATACT
Ralstonia eutropha JMP134 Reut_B5638 -94 5.8 ATGCTTGTATATACAACACT