Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of DtxR regulog to Corynebacterium glutamicum R

Reference regulog properties
Source regulog: DtxR - Corynebacteriaceae
Regulator type: Transcription factor
Regulator family: DtxR
Regulation mode: repressor, activator
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Actinobacteria
Propagated regulon:
Target genome Corynebacterium glutamicum R
Orthologous TF(s) cgR_1750
Regulated genes 29
Built upon 139 sites [see more]
Predicted regulatory interactions in Corynebacterium glutamicum R
Locus tag Position Score Sequence
Position: -61
Score: 5.3
Sequence: AATGGTTAGGCTAACCTTA
Locus tag: cgR_0200
cgR_0200 -61 5.3 AATGGTTAGGCTAACCTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cg0160
Ortholog function: Predicted membrane protein
Corynebacterium glutamicum ATCC 13032 cg0160 -1 5.3 AATGGTTAGGCTAACCTTA
Position: -47
Score: 4.9
Sequence: TAAGGATAACCTTGCCTTA
Locus tag: cgR_0419
cgR_0419 -47 4.9 TAAGGATAACCTTGCCTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fepB1
Ortholog function: Predicted Fe-siderophore ABC transporter, substrate-binding protein
Corynebacterium glutamicum ATCC 13032 cg0405 -47 4.9 TAAGGATAACCTTGCCTTA
Position: -130
Score: 5.2
Sequence: TAAAGTAAGGCTACCCTAA
Locus tag: cgR_0443
cgR_0443 -130 5.2 TAAAGTAAGGCTACCCTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: sdhC
Ortholog function: Succinate dehydrogenase cytochrome b subunit
Corynebacterium aurimucosum ATCC 700975 cauri_0257 -129 4.6 TAAGGTGATCCTTGCCTTA
Corynebacterium diphtheriae NCTC 13129 DIP0370 -129 4.9 TTAGGTCAGGGTACCCTAA
Corynebacterium efficiens YS-314 CE0386 -130 4.8 CGAGGTGAGGCTAGCCTAA
Corynebacterium glutamicum ATCC 13032 cg0445 -130 5.2 TAAAGTAAGGCTATCCTAA
Position: -160
Score: 4.9
Sequence: TTAAGTTAGCATAGCCTTA
Locus tag: cgR_0461
cgR_0461 -160 4.9 TTAAGTTAGCATAGCCTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: htaA
Ortholog function: Predicted membrane protein
Corynebacterium glutamicum ATCC 13032 cg0466 -160 4.9 TTAAGTTAGCATAGCCTTA
Position: -51
Score: 5.2
Sequence: TTAGGTTAAGCTAATCTAT
Locus tag: cgR_0465
cgR_0465 -51 5.2 TTAGGTTAAGCTAATCTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cg0470
Ortholog function: Hypothetical protein
Corynebacterium glutamicum ATCC 13032 cg0470 -100 4.3 TAAGGTTACCCTACCCTCT
-51 5.1 TTAGGTTAAGCTAATCTAG
Position: -30
Score: 4.8
Sequence: TTAGGCTTGCCATACCTAT
Locus tag: cgR_0518
cgR_0518 -30 4.8 TTAGGCTTGCCATACCTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cg0527
Ortholog function: Putative ArsR family regulatory protein
Corynebacterium diphtheriae NCTC 13129 DIP0415 -30 4.7 TTAGCTTAACCTTGCCTAT
Corynebacterium efficiens YS-314 CE0466 -73 4.6 ATAGCTTAGGCTTACCTGC
Corynebacterium glutamicum ATCC 13032 cg0527 -30 4.8 TTAGGCTTGCCATACCTAT
Position: -110
Score: 4.7
Sequence: TTAGTAAAGGCTCACCTAA
Locus tag: cgR_0602
cgR_0602 -110 4.7 TTAGTAAAGGCTCACCTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: frgC
Ortholog function: Fe-siderophore ABC transporter, permaease protein 1
Corynebacterium glutamicum ATCC 13032 cg0591 -110 4.7 TTAGTAAAGGCTCACCTAA
Position: -44
Score: 5
Sequence: ATAGGATAGGTTAACCTGA
Locus tag: cgR_0761
cgR_0761 -44 5 ATAGGATAGGTTAACCTGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fepB1
Ortholog function: Predicted Fe-siderophore ABC transporter, substrate-binding protein
Corynebacterium glutamicum ATCC 13032 cg0748 -44 5 ATAGGATAGGTTAACCTGA
Position: -57
Score: 4.9
Sequence: GTCGGTCAGCCTAACCTAA
Position: -52
Score: 3.9
Sequence: TCAGCCTAACCTAAGTTAA
Locus tag: cgR_0789
cgR_0789 -57 4.9 GTCGGTCAGCCTAACCTAA
-52 3.9 TCAGCCTAACCTAAGTTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: irp1A
Ortholog function: Predicted lipoprotein
Corynebacterium amycolatum SK46 CORAM0001_1990 -17 4.7 TTAGGCTAGCCTGCCCTTT
Corynebacterium efficiens YS-314 CE0687 -57 3.9 GTTGGACACCCTAACCTAA
Corynebacterium glutamicum ATCC 13032 cg0771 -59 4.6 GTCGGGCAGCCTAACCTAA
Position: -49
Score: 4.8
Sequence: TAAGGTTTGCCTAATCTTT
Locus tag: cgR_0922
cgR_0922 -49 4.8 TAAGGTTTGCCTAATCTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cg0922
Ortholog function: Predicted Fe-siderophore ABC transporter, substrate-binding protein
Corynebacterium glutamicum ATCC 13032 cg0922 -49 4.8 TAAGGTTTGCCTAATCTTT
Position: -123
Score: 4.5
Sequence: AAAGGTTTGGCTTGGTTAA
Locus tag: cgR_0924
cgR_0924 -123 4.5 AAAGGTTTGGCTTGGTTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: feuS
Ortholog function: Petrobactin ABC transporter, substrate-binding protein
Corynebacterium amycolatum SK46 CORAM0001_1939 -117 4.5 ATAGGGAATCCTAAGCTAA
-92 4.1 GCAGGTAATGATTACCTAA
Corynebacterium aurimucosum ATCC 700975 cauri_0741 -83 4.8 GAAGGTAAGCCTTACTTGA
-33 4.5 TGTGGTTAGCCACACCTAA
Corynebacterium efficiens YS-314 CE0881 -80 4.8 AAAGGTTTGGCTAAGTTAA
-40 3.9 TTTAGGTACCCTAACCTCA
Corynebacterium glutamicum ATCC 13032 cg0924 -123 4.5 AAAGGTTTGGCTTGGTTAA
-83 4.2 TTTAGGTAACCTAACCTCA
Corynebacterium jeikeium K411 jk1887 -86 4.8 TTAAGCAAGGCTTGACTAA
-51 4.5 TAAGGTTCGGCTAACTGTA
Position: -192
Score: 4.2
Sequence: TTAGGTTAGGCTCTAATAT
Locus tag: cgR_0925
cgR_0925 -192 4.2 TTAGGTTAGGCTCTAATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: feuB
Ortholog function: Petrobactin ABC transporter, permease protein 1
Corynebacterium amycolatum SK46 CORAM0001_1938 -117 4.5 ATAGGGAATCCTAAGCTAA
-92 4.1 GCAGGTAATGATTACCTAA
Corynebacterium aurimucosum ATCC 700975 cauri_0742 -83 4.8 GAAGGTAAGCCTTACTTGA
-33 4.5 TGTGGTTAGCCACACCTAA
Corynebacterium efficiens YS-314 CE0882 -80 4.8 AAAGGTTTGGCTAAGTTAA
-40 3.9 TTTAGGTACCCTAACCTCA
Corynebacterium glutamicum ATCC 13032 cg0926 -192 4.2 TTAGGTTAGGCTCTAATAT
Corynebacterium jeikeium K411 jk1886 -86 4.8 TTAAGCAAGGCTTGACTAA
-51 4.5 TAAGGTTCGGCTAACTGTA
Corynebacterium urealyticum DSM 7109 cur_0911 -61 4.4 TTAGGCTTGCCTATCTTCA
-16 4.8 TTAGGGCAAGCTAACCTTG
Position: -219
Score: 4
Sequence: TTACGTGAGCGTAGCCGAA
Locus tag: cgR_0949
cgR_0949 -219 4 TTACGTGAGCGTAGCCGAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cg0955
Ortholog function: Predicted secreted protein
Corynebacterium glutamicum ATCC 13032 cg0955 -219 4 TTACGTGAGCGTAGCCGAA
Position: -101
Score: 4.1
Sequence: TTAAGTCAGTGTTACCTAA
Locus tag: cgR_1054
cgR_1054 -101 4.1 TTAAGTCAGTGTTACCTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cg1088
Ortholog function: Predicted multidrug export ABC trasporter, ATP-binding protein 2
Corynebacterium glutamicum ATCC 13032 cg1088 -101 4.1 TTAAGTCAGTGTTACCTAA
Corynebacterium jeikeium K411 jk1781 -105 5 TTAGGTTATGCTAAGTTAA
Corynebacterium urealyticum DSM 7109 cur_0327 -102 5 TTAGGTTATGCTAAGTTAA
Position: -52
Score: 4.9
Sequence: TTTTGTTAGGCTTGCCTAG
Locus tag: cgR_1325
cgR_1325 -52 4.9 TTTTGTTAGGCTTGCCTAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: cg1405
Ortholog function: hypothetical protein
Corynebacterium amycolatum SK46 CORAM0001_1958 -85 5.2 TTGTGTTAGGCTTACCTAA
Corynebacterium aurimucosum ATCC 700975 cauri_2060 -81 5.2 GTATGTTAGCCTTACCTAA
Corynebacterium efficiens YS-314 CE1346 -42 4.5 AGAGTGTAGGCTTACCTAT
Corynebacterium glutamicum ATCC 13032 cg1405 -52 4.9 TTTTGTTAGGCTTGCCTAG
Corynebacterium urealyticum DSM 7109 cur_1524 -79 5.2 TTGTGTTAGCCTAACCTAA
Position: -49
Score: 4.6
Sequence: TTAGGTAAGGTTTGCATAC
Locus tag: cgR_1334
cgR_1334 -49 4.6 TTAGGTAAGGTTTGCATAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fepB2
Ortholog function: Fe-siderophore ABC transporter, substrate-binding protein
Corynebacterium aurimucosum ATCC 700975 cauri_0725 -126 5.2 GTAGGTAAGGTTAGCCTTA
-39 4.5 GTTGGTTAGGCTATCTTTT
Corynebacterium aurimucosum ATCC 700975 cauri_0726 -126 5.2 GTAGGTAAGGTTAGCCTTA
-39 4.5 GTTGGTTAGGCTATCTTTT
Corynebacterium glutamicum ATCC 13032 cg1418 -49 4.6 TTAGGTAAGGTTTGCATAC
Position: -58
Score: 4.8
Sequence: TTAGGTTAGGCAAGCCATA
Locus tag: cgR_1511
cgR_1511 -58 4.8 TTAGGTTAGGCAAGCCATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cg1642
Ortholog function: Siderophore-interacting protein
Corynebacterium glutamicum ATCC 13032 cg1642 -58 4.8 TTAGGTTAGGCAAGCCATA
Position: -145
Score: 3.9
Sequence: TTAGGGTTTGCTTAGTTTT
Locus tag: cgR_1616
cgR_1616 -145 3.9 TTAGGGTTTGCTTAGTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sufR
Ortholog function: Iron-sulfur cluster biogenesis transcriptional regulator SufR, ArsR family
Corynebacterium diphtheriae NCTC 13129 DIP1296 -173 4.7 TTAGGGTGGGCTAACCTGC
Corynebacterium glutamicum ATCC 13032 cg1765 -146 3.8 TTAGGGTTCGCTTAGTTTT
Corynebacterium jeikeium K411 jk0985 -124 4.2 TTAGGCAGGGTTACCTTAG
Position: -111
Score: 4
Sequence: GTGTGTGAGGCAAGCCTAA
Position: -106
Score: 4.2
Sequence: TGAGGCAAGCCTAAGTAAA
Locus tag: cgR_1856
cgR_1856 -111 4 GTGTGTGAGGCAAGCCTAA
-106 4.2 TGAGGCAAGCCTAAGTAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: xerC
Ortholog function: Tyrosine recombinase
Corynebacterium amycolatum SK46 CORAM0001_0780 -150 5.1 ATAGGCAAGGCAAGCCTAA
Corynebacterium diphtheriae NCTC 13129 DIP1510 -214 4.1 AAAGGCAAGCCTAAGTAAA
Corynebacterium efficiens YS-314 CE1917 -221 4.4 GTGGGTGAGGCAAGCCTAA
Corynebacterium glutamicum ATCC 13032 cg2224 -112 4 GTGTGTGAGGCAAGCCTAA
Position: -23
Score: 5.2
Sequence: TTAGGTAAGGCTATCTTTT
Locus tag: cgR_1863
cgR_1863 -23 5.2 TTAGGTAAGGCTATCTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cbrA
Ortholog function: Fe-siderophores ABC transporter, periplasmic protein
Corynebacterium aurimucosum ATCC 700975 cauri_0722 -106 4.1 AAAAGATAGCCTAACCAAC
-19 5 TAAGGCTAACCTTACCTAC
Corynebacterium glutamicum ATCC 13032 cg2234 -23 5 TTAGGCAAGGCTACCTTTT
Corynebacterium kroppenstedtii DSM 44385 ckrop_0465 -23 4.8 AACGCCTAGGCTAACCTAA
Position: -18
Score: 4.7
Sequence: TCAAGTAAGGTTTACCTTA
Locus tag: cgR_1992
cgR_1992 -18 4.7 TCAAGTAAGGTTTACCTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cg2311
Ortholog function: Predicted methyltransferase (EC 2.1.1.-)
Corynebacterium diphtheriae NCTC 13129 DIP0762 -31 4.5 TAAGGTATGCCTTAGTTAT
Corynebacterium glutamicum ATCC 13032 cg2311 -18 4.7 TCAAGTAAGGTTTACCTTA
Position: -139
Score: 4.7
Sequence: GTAGGTGTGGGTAACCTAA
Locus tag: cgR_2104
cgR_2104 -139 4.7 GTAGGTGTGGGTAACCTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hmuO
Ortholog function: Heme oxygenase (EC 1.14.99.3)
Corynebacterium amycolatum SK46 CORAM0001_1802 -165 5.6 TAAGGATAGGCTAACCTAG
Corynebacterium aurimucosum ATCC 700975 cauri_1721 -70 4.2 TTAGGCCAGAATTACCTAA
-50 5.1 CAAGGTAAGCCTAACCTAT
Corynebacterium diphtheriae NCTC 13129 DIP1669 -80 4.8 TGAGGGGAACCTAACCTAA
Corynebacterium glutamicum ATCC 13032 cg2445 -139 4.7 GTAGGTGTGGGTAACCTAA
Corynebacterium jeikeium K411 jk0320 -112 4.7 TAAGTCGAGCCTTACCTAA
-92 4.3 TAAGGTAACACTATCCTAA
Corynebacterium urealyticum DSM 7109 cur_1670 -74 4.6 CTAGGTTATGCTAACCTCA
-54 4.7 CGAGGTTAACCTAACCTAT
Position: -56
Score: 4.4
Sequence: TTATGCTGCGCTAACCTAT
Locus tag: cgR_2433
cgR_2433 -56 4.4 TTATGCTGCGCTAACCTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ftn
Ortholog function: Ferritin
Corynebacterium amycolatum SK46 CORAM0001_0900 -74 4.1 ATAGGCAAGGCCTGGCTTA
Corynebacterium aurimucosum ATCC 700975 cauri_0076 -121 4.6 TTGGGTTAGGTAAACCTAC
Corynebacterium diphtheriae NCTC 13129 DIP1866 -56 4.5 TTATGCTGGGCTATCTTAA
Corynebacterium efficiens YS-314 CE2420 -56 4.1 TTATGGTGCGCTAACCTTG
Corynebacterium glutamicum ATCC 13032 cg2782 -56 4.4 TTATGCTGCGCTAACCTAT
Position: -178
Score: 4.3
Sequence: CACGGTGAACCTAACCTAA
Locus tag: cgR_2703
cgR_2703 -178 4.3 CACGGTGAACCTAACCTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cysI
Ortholog function: Ferredoxin--sulfite reductase, actinobacterial type (EC 1.8.7.1)
Corynebacterium glutamicum ATCC 13032 cg3118 -178 4.3 CACGGTGAACCTAACCTAA
Position: -223
Score: 4.6
Sequence: TTAGGTTAGGTTCACCGTG
Locus tag: cgR_2704
cgR_2704 -223 4.6 TTAGGTTAGGTTCACCGTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: cysJ
Ortholog function: Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type (EC 1.18.1.2)
Corynebacterium glutamicum ATCC 13032 cg3119 -223 4.6 TTAGGTTAGGTTCACCGTG
Position: -125
Score: 4.8
Sequence: TAAGGCAAGCCTAAATTAG
Locus tag: cgR_2738
cgR_2738 -125 4.8 TAAGGCAAGCCTAAATTAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: cg3156
Ortholog function: Hypothetical protein
Corynebacterium glutamicum ATCC 13032 cg3156 -116 4.8 TAAGGCAAGCCTAAATTAG
Position: -106
Score: 4.4
Sequence: ATGAGTAAGGCTAGACTAA
Locus tag: cgR_2844
cgR_2844 -106 4.4 ATGAGTAAGGCTAGACTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hrrA
Ortholog function: Transcriptional regulator HrrA, LuxR family
Corynebacterium glutamicum ATCC 13032 cg3247 -106 4.4 ATGAGTAAGGCTAGACTAA
Position: -80
Score: 4.7
Sequence: TTAGGATAGGGCAACCTAA
Position: -60
Score: 3.9
Sequence: ATAAATAAGCTTAGGCTAA
Locus tag: cgR_2888
cgR_2888 -80 4.7 TTAGGATAGGGCAACCTAA
-60 3.9 ATAAATAAGCTTAGGCTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: dps
Ortholog function: Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1)
Corynebacterium diphtheriae NCTC 13129 DIP2303 -81 3.9 TAAGGATAGGCCACCCCAA
Corynebacterium glutamicum ATCC 13032 cg3327 -80 4.1 TCAGGATAGGACAACCTAA
-60 3.9 ATAAATAAGCTTAGGCTAA
Position: -18
Score: 4.1
Sequence: CTGAGTTAGGATAGCCTAA
Locus tag: cgR_2963
cgR_2963 -18 4.1 CTGAGTTAGGATAGCCTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: frgD
Ortholog function: Fe-siderophore ABC transporter, substrate-binding protein
Corynebacterium aurimucosum ATCC 700975 cauri_2325 -19 5.3 TTAGGTTAGGCTACCTTTT
Corynebacterium diphtheriae NCTC 13129 DIP1062 -24 4 TGAAATTAGGGTAACCTGT
Corynebacterium glutamicum ATCC 13032 cg3404 -18 4.4 TTGCGTTAGGATAGCCTAA
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