Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of Zur regulog to Bacillus pumilus SAFR-032

Reference regulog properties
Source regulog: Zur - Bacillales
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Zinc homeostasis
Effector: Zinc ion, (Zn2+)
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus pumilus SAFR-032
Orthologous TF(s) BPUM_2241
Regulated genes 5
Built upon 67 sites [see more]
Predicted regulatory interactions in Bacillus pumilus SAFR-032
Locus tag Position Score Sequence
Position: -46
Score: 5.4
Sequence: TAAATCGTAATCATTCTTTTTAT
Locus tag: BPUM_2243
BPUM_2243 -46 5.4 TAAATCGTAATCATTCTTTTTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: znuC
Ortholog function: Zinc ABC transporter, ATP-binding protein ZnuC
Bacillus pumilus SAFR-032 BPUM_2243 -46 5.4 TAAATCGTAATCATTCTTTTTAT
Anoxybacillus flavithermus WK1 Aflv_0867 -36 5.7 TGAATCGGAATCATTTTGAATTA
Geobacillus kaustophilus HTA426 GK2471 -39 5.8 CAAATCGGAATGATTCTGAATTA
Bacillus cereus ATCC 14579 BC4279 -39 6 TAAATCGGAATCATTCTGAATTA
Bacillus halodurans C-125 BH1394 -72 5 TAAATCGGAATGATTCTTAATAT
Bacillus clausii KSM-K16 ABC1702 -39 5.1 TAAATCGGAAGCATTCTGAATAA
Oceanobacillus iheyensis HTE831 OB2396 -297 6 TAATTCGTAACGATTCCTATTTA
-274 5.1 CATTTCATAATCATTACGCTATT
Position: -151
Score: 6.5
Sequence: TGTATCGTAATAATTACGATTTG
Locus tag: BPUM_2707
BPUM_2707 -151 6.5 TGTATCGTAATAATTACGATTTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: ytiB
Ortholog function: Carbonic anhydrase (EC 4.2.1.1)
Bacillus subtilis subsp. subtilis str. 168 BSU30690 -39 7 TAAAACGTAATTATTACGATTTA
Bacillus amyloliquefaciens FZB42 RBAM_027700 -39 6.8 TAAAACGTAATTATTACGATTTG
Bacillus pumilus SAFR-032 BPUM_2707 -188 6.1 TAGATAGAAATGATTACGATTTA
-151 6.5 TGTATCGTAATAATTACGATTTG
Bacillus licheniformis DSM 13 BLi03211 -111 6.2 TAAAACGTAATTGTTTCGATTTG
Position: -44
Score: 6.5
Sequence: TAAAGCGTAATGATTACGTTTTG
Locus tag: BPUM_2709
BPUM_2709 -44 6.5 TAAAGCGTAATGATTACGTTTTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: rpmE2
Ortholog function: 50S ribosomal protein L31 type B
Bacillus subtilis subsp. subtilis str. 168 BSU30700 -39 7 TAAAACGTAATTATTACGATTTA
Bacillus amyloliquefaciens FZB42 RBAM_027710 -39 6.8 TAAAACGTAATTATTACGATTTG
Bacillus pumilus SAFR-032 BPUM_2709 -44 6.5 TAAAGCGTAATGATTACGTTTTG
Bacillus licheniformis DSM 13 BLi03214 -39 6.6 TAAAACGTAATTATTACGTTTTG
Position: -42
Score: 6.5
Sequence: CAAATCGTAACCATTACGAATTA
Locus tag: BPUM_3310
BPUM_3310 -42 6.5 CAAATCGTAACCATTACGAATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rpmGA1
Ortholog function: 50S ribosomal protein L33
Bacillus amyloliquefaciens FZB42 RBAM_022140 -40 6.8 TAAAACGTAATAATTACGATTTG
Bacillus pumilus SAFR-032 BPUM_3310 -42 6.5 CAAATCGTAACCATTACGAATTA
Bacillus licheniformis DSM 13 BLi02553 -37 6.6 TAAAGCGTAATGATTACGTTTTA
Anoxybacillus flavithermus WK1 Aflv_1438 -45 6.3 CAAAACGTAATGATTACTATTTT
Bacillus cereus ATCC 14579 BC4339 -55 7 TAAATCGTAATCATTACGTTTTA
Position: -69
Score: 6.6
Sequence: CAAATCGTAATCATTACTTTTTA
Locus tag: BPUM_3311
BPUM_3311 -69 6.6 CAAATCGTAATCATTACTTTTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yciC
Ortholog function: Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family
Bacillus subtilis subsp. subtilis str. 168 BSU03360 -37 5.8 TAAATCGTAATCATTCTATTTTA
Bacillus amyloliquefaciens FZB42 RBAM_003550 -103 6.6 TAAATAGTAACGATTACGATTTA
-38 5.7 TAAATCGTAATCATTCTATTTTG
Bacillus pumilus SAFR-032 BPUM_3311 -69 6.6 CAAATCGTAATCATTACTTTTTA
Bacillus licheniformis DSM 13 BLi00765 -46 7 TAAATCGTAATAATTACGATTTG
Bacillus clausii KSM-K16 ABC4020 -40 6.9 TAATTCGTAATCATTACGATTTA
Oceanobacillus iheyensis HTE831 OB3429 -82 6.3 TTAATCGTAATGATTACGTTTTT
Paenibacillus sp. JDR-2 Pjdr2_3068 -162 5.6 TTAATCGTAATGTTGACGATTAA
-118 5.2 TTATACGTAATTATTACGTTCAA
-67 5.8 CTAATCGTAATAGTTACGAAATA
-35 5.1 TTAATAGTAATGATTACGGAAAA
Paenibacillus sp. JDR-2 Pjdr2_3068 -162 5.6 TTAATCGTAATGTTGACGATTAA
-118 5.2 TTATACGTAATTATTACGTTCAA
-67 5.8 CTAATCGTAATAGTTACGAAATA
-35 5.1 TTAATAGTAATGATTACGGAAAA
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