Propagation of DtxR regulog to Corynebacterium efficiens YS-314
| Source regulog: | DtxR - Corynebacteriaceae |
| Regulator type: | Transcription factor |
| Regulator family: | DtxR |
| Regulation mode: | repressor, activator |
| Biological process: | Iron homeostasis |
| Effector: | Iron ion, (Fe2+) |
| Phylum: | Actinobacteria |
| Propagated regulon: | |
| Target genome | Corynebacterium efficiens YS-314 |
| Orthologous TF(s) | CE1812 |
| Regulated genes | 15 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -49
Score: 4.7 Sequence: GGAGCTTAGGCTAACCTTG
Locus tag: CE0125
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| CE0125 | -49 | 4.7 | GGAGCTTAGGCTAACCTTG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cg0160 | ||||
| Ortholog function: Predicted membrane protein | ||||
| Corynebacterium efficiens YS-314 | CE0125 | -49 | 4.7 | GGAGCTTAGGCTAACCTTG |
| Corynebacterium glutamicum ATCC 13032 | cg0159 | -1 | 5.3 | AATGGTTAGGCTAACCTTA |
|
Position: -130
Score: 4.8 Sequence: CGAGGTGAGGCTAGCCTAA
Locus tag: CE0386
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| CE0386 | -130 | 4.8 | CGAGGTGAGGCTAGCCTAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sdhC | ||||
| Ortholog function: Succinate dehydrogenase cytochrome b subunit | ||||
| Corynebacterium aurimucosum ATCC 700975 | cauri_0257 | -129 | 4.6 | TAAGGTGATCCTTGCCTTA |
| Corynebacterium diphtheriae NCTC 13129 | DIP0370 | -129 | 4.9 | TTAGGTCAGGGTACCCTAA |
| Corynebacterium efficiens YS-314 | CE0386 | -130 | 4.8 | CGAGGTGAGGCTAGCCTAA |
| Corynebacterium glutamicum ATCC 13032 | cg0445 | -130 | 5.2 | TAAAGTAAGGCTATCCTAA |
|
Position: -78
Score: 4.5 Sequence: GTAGGATAGCTTAGGCTTA
Position: -73
Score: 4.6 Sequence: ATAGCTTAGGCTTACCTGC
Locus tag: CE0466
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| CE0466 | -78 | 4.5 | GTAGGATAGCTTAGGCTTA | |
| -73 | 4.6 | ATAGCTTAGGCTTACCTGC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cg0527 | ||||
| Ortholog function: Putative ArsR family regulatory protein | ||||
| Corynebacterium diphtheriae NCTC 13129 | DIP0415 | -30 | 4.7 | TTAGCTTAACCTTGCCTAT |
| Corynebacterium efficiens YS-314 | CE0466 | -73 | 4.6 | ATAGCTTAGGCTTACCTGC |
| Corynebacterium glutamicum ATCC 13032 | cg0527 | -30 | 4.8 | TTAGGCTTGCCATACCTAT |
|
Position: -57
Score: 3.9 Sequence: GTTGGACACCCTAACCTAA
Position: -42
Score: 3.9 Sequence: CTAAGTAAGGCTCCACTAA
Locus tag: CE0687
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| CE0687 | -57 | 3.9 | GTTGGACACCCTAACCTAA | |
| -42 | 3.9 | CTAAGTAAGGCTCCACTAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: irp1A | ||||
| Ortholog function: Predicted lipoprotein | ||||
| Corynebacterium amycolatum SK46 | CORAM0001_1990 | -17 | 4.7 | TTAGGCTAGCCTGCCCTTT |
| Corynebacterium efficiens YS-314 | CE0687 | -57 | 3.9 | GTTGGACACCCTAACCTAA |
| Corynebacterium glutamicum ATCC 13032 | cg0771 | -59 | 4.6 | GTCGGGCAGCCTAACCTAA |
|
Position: -80
Score: 4.8 Sequence: AAAGGTTTGGCTAAGTTAA
Locus tag: CE0881
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| CE0881 | -80 | 4.8 | AAAGGTTTGGCTAAGTTAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: feuS | ||||
| Ortholog function: Petrobactin ABC transporter, substrate-binding protein | ||||
| Corynebacterium amycolatum SK46 | CORAM0001_1939 | -117 | 4.5 | ATAGGGAATCCTAAGCTAA |
| -92 | 4.1 | GCAGGTAATGATTACCTAA | ||
| Corynebacterium aurimucosum ATCC 700975 | cauri_0741 | -83 | 4.8 | GAAGGTAAGCCTTACTTGA |
| -33 | 4.5 | TGTGGTTAGCCACACCTAA | ||
| Corynebacterium efficiens YS-314 | CE0881 | -80 | 4.8 | AAAGGTTTGGCTAAGTTAA |
| -40 | 3.9 | TTTAGGTACCCTAACCTCA | ||
| Corynebacterium glutamicum ATCC 13032 | cg0924 | -123 | 4.5 | AAAGGTTTGGCTTGGTTAA |
| -83 | 4.2 | TTTAGGTAACCTAACCTCA | ||
| Corynebacterium jeikeium K411 | jk1887 | -86 | 4.8 | TTAAGCAAGGCTTGACTAA |
| -51 | 4.5 | TAAGGTTCGGCTAACTGTA | ||
|
Position: -42
Score: 4.1 Sequence: TTTTGTTAGGCATCCCTTG
Position: -37
Score: 3.7 Sequence: TTAGGCATCCCTTGCCTCG
Locus tag: CE1009
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| CE1009 | -42 | 4.1 | TTTTGTTAGGCATCCCTTG | |
| -37 | 3.7 | TTAGGCATCCCTTGCCTCG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cg1070 | ||||
| Ortholog function: Conserved hypothetical protein | ||||
| Corynebacterium diphtheriae NCTC 13129 | DIP0894 | -25 | 3.8 | CTAGGATTGCCTACACTTA |
| Corynebacterium efficiens YS-314 | CE1009 | -42 | 4.1 | TTTTGTTAGGCATCCCTTG |
| Corynebacterium glutamicum ATCC 13032 | cg1070 | -37 | 4.7 | ATAGGTTATCCAAGCCTAA |
|
Position: -42
Score: 4.5 Sequence: AGAGTGTAGGCTTACCTAT
Locus tag: CE1346
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| CE1346 | -42 | 4.5 | AGAGTGTAGGCTTACCTAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cg1405 | ||||
| Ortholog function: hypothetical protein | ||||
| Corynebacterium amycolatum SK46 | CORAM0001_1958 | -85 | 5.2 | TTGTGTTAGGCTTACCTAA |
| Corynebacterium aurimucosum ATCC 700975 | cauri_2060 | -81 | 5.2 | GTATGTTAGCCTTACCTAA |
| Corynebacterium efficiens YS-314 | CE1346 | -42 | 4.5 | AGAGTGTAGGCTTACCTAT |
| Corynebacterium glutamicum ATCC 13032 | cg1405 | -52 | 4.9 | TTTTGTTAGGCTTGCCTAG |
| Corynebacterium urealyticum DSM 7109 | cur_1524 | -79 | 5.2 | TTGTGTTAGCCTAACCTAA |
|
Position: -221
Score: 4.4 Sequence: GTGGGTGAGGCAAGCCTAA
Position: -216
Score: 4.2 Sequence: TGAGGCAAGCCTAAGTAAA
Locus tag: CE1917
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| CE1917 | -221 | 4.4 | GTGGGTGAGGCAAGCCTAA | |
| -216 | 4.2 | TGAGGCAAGCCTAAGTAAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: xerC | ||||
| Ortholog function: Tyrosine recombinase | ||||
| Corynebacterium amycolatum SK46 | CORAM0001_0780 | -150 | 5.1 | ATAGGCAAGGCAAGCCTAA |
| Corynebacterium diphtheriae NCTC 13129 | DIP1510 | -214 | 4.1 | AAAGGCAAGCCTAAGTAAA |
| Corynebacterium efficiens YS-314 | CE1917 | -221 | 4.4 | GTGGGTGAGGCAAGCCTAA |
| Corynebacterium glutamicum ATCC 13032 | cg2224 | -112 | 4 | GTGTGTGAGGCAAGCCTAA |
|
Position: -56
Score: 4.1 Sequence: TTATGGTGCGCTAACCTTG
Locus tag: CE2420
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| CE2420 | -56 | 4.1 | TTATGGTGCGCTAACCTTG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ftn | ||||
| Ortholog function: Ferritin | ||||
| Corynebacterium amycolatum SK46 | CORAM0001_0900 | -74 | 4.1 | ATAGGCAAGGCCTGGCTTA |
| Corynebacterium aurimucosum ATCC 700975 | cauri_0076 | -121 | 4.6 | TTGGGTTAGGTAAACCTAC |
| Corynebacterium diphtheriae NCTC 13129 | DIP1866 | -56 | 4.5 | TTATGCTGGGCTATCTTAA |
| Corynebacterium efficiens YS-314 | CE2420 | -56 | 4.1 | TTATGGTGCGCTAACCTTG |
| Corynebacterium glutamicum ATCC 13032 | cg2782 | -56 | 4.4 | TTATGCTGCGCTAACCTAT |