Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of McbR regulog to Corynebacterium efficiens YS-314

Reference regulog properties
Source regulog: McbR - Corynebacteriaceae
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Methionine biosynthesis
Effector: S-adenosylmethionine; S-adenosylhomocysteine
Phylum: Actinobacteria
Propagated regulon:
Target genome Corynebacterium efficiens YS-314
Orthologous TF(s) CE2788
Regulated genes 14
Built upon 162 sites [see more]
Predicted regulatory interactions in Corynebacterium efficiens YS-314
Locus tag Position Score Sequence
Position: -94
Score: 4.7
Sequence: TAGACCGAGCTGTACA
Locus tag: CE0631
CE0631 -94 4.7 TAGACCGAGCTGTACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: metQ
Ortholog function: Methionine ABC transporter substrate-binding protein
Corynebacterium amycolatum SK46 CORAM0001_0284 -70 5 AAGACAGCTTGGTCTA
Corynebacterium diphtheriae NCTC 13129 DIP0611 -166 4.7 TAGACAAAGCTGTACA
Corynebacterium efficiens YS-314 CE0631 -94 4.7 TAGACCGAGCTGTACA
Corynebacterium glutamicum ATCC 13032 cg0737 -109 4.6 TAGACCAAGCTGTACA
Position: -139
Score: 4.6
Sequence: CGAACCGCTCGGTCTA
Position: -117
Score: 4.9
Sequence: TAGACCGAGCGGTTCA
Locus tag: CE0679
CE0679 -139 4.6 CGAACCGCTCGGTCTA
-117 4.9 TAGACCGAGCGGTTCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: metY
Ortholog function: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)
Corynebacterium amycolatum SK46 CORAM0001_0291 -73 5 TAGACAGCTTGGTTCA
Corynebacterium aurimucosum ATCC 700975 cauri_0513 -92 4.2 CCAACCGCTCGGTCTA
-27 4.8 TGAACCGCTTGGTCTA
Corynebacterium diphtheriae NCTC 13129 DIP0630 -138 4.1 CGCACCACTTTGTCTA
-82 4.6 TAGACCGATCGGTTTC
Corynebacterium efficiens YS-314 CE0679 -139 4.6 CGAACCGCTCGGTCTA
-117 4.9 TAGACCGAGCGGTTCA
Corynebacterium glutamicum ATCC 13032 cg0755 -90 4.5 TATACCACACAGTCTA
-68 4.7 TAGACCAAGCTGTTCA
Corynebacterium jeikeium K411 jk1694 -171 4.5 TAGACCAAGCGGTATG
-93 5.2 TAGACAGAGCGGTTTA
Corynebacterium kroppenstedtii DSM 44385 ckrop_1568 -300 4.6 CATACCGCTTAGTCTA
-244 4.4 TAGACAGGGCGGTTTG
-225 4.8 TAGACCGAGCGGTACA
Corynebacterium urealyticum DSM 7109 cur_0423 -212 4.9 TAGACCAAGTGGTATA
-145 5.2 TAGACAGAGCGGTTTA
Position: -290
Score: 4.3
Sequence: CAGACCATGCTGTCTG
Locus tag: CE1209
CE1209 -290 4.3 CAGACCATGCTGTCTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: metE
Ortholog function: 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase (EC 2.1.1.14)
Corynebacterium efficiens YS-314 CE1209 -290 4.3 CAGACCATGCTGTCTG
Corynebacterium glutamicum ATCC 13032 cg1290 -272 4.9 CAGACCGAGCAGTCTA
Corynebacterium jeikeium K411 jk0234 -205 4.8 CAGACTAAGCTGTCTA
Corynebacterium urealyticum DSM 7109 cur_1766 -256 5 CAGACCAAGCTGTCTA
Position: -110
Score: 4.9
Sequence: TGAACAGCTTGGTCTA
Locus tag: CE1289
CE1289 -110 4.9 TGAACAGCTTGGTCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hom
Ortholog function: Homoserine dehydrogenase (EC 1.1.1.3)
Corynebacterium aurimucosum ATCC 700975 cauri_1049 -70 4.6 TAGACAGCTCGTTCTG
Corynebacterium efficiens YS-314 CE1289 -110 4.9 TGAACAGCTTGGTCTA
Corynebacterium glutamicum ATCC 13032 cg1337 -113 4.9 TGAACAGCTTGGTCTA
Corynebacterium jeikeium K411 jk1352 -105 5.2 TGGACAGCTTTGTCTA
Corynebacterium kroppenstedtii DSM 44385 ckrop_1290 -100 4.5 CATACAGCTTTGTCTG
Corynebacterium urealyticum DSM 7109 cur_0694 -134 5.5 TAGACAGCTTGGTCTA
Position: -119
Score: 5
Sequence: TAGACTGTTCTGTCTA
Locus tag: CE1328
CE1328 -119 5 TAGACTGTTCTGTCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fixB
Ortholog function: Electron transfer flavoprotein, beta subunit
Corynebacterium efficiens YS-314 CE1328 -119 5 TAGACTGTTCTGTCTA
Corynebacterium glutamicum ATCC 13032 cg1386 -158 4.5 TAGACTGGTTTGTCTG
Position: -20
Score: 4.2
Sequence: CGTACTAAGCTGTCTA
Locus tag: CE1637
CE1637 -20 4.2 CGTACTAAGCTGTCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: metH
Ortholog function: 5-methyltetrahydrofolate-homocysteine methyltransferase (EC 2.1.1.13)
Corynebacterium amycolatum SK46 CORAM0001_0986 -19 4.6 TAGACTAAGGTGTCTA
Corynebacterium diphtheriae NCTC 13129 DIP1259 -17 4.5 CATACTAAGCTGTCTA
Corynebacterium efficiens YS-314 CE1637 -20 4.2 CGTACTAAGCTGTCTA
Corynebacterium glutamicum ATCC 13032 cg1701 -95 4.2 CGTACTAAGCTGTCTA
Corynebacterium kroppenstedtii DSM 44385 ckrop_0919 20 5.1 TAGACTAAGCTGTCTA
Position: -73
Score: 5.5
Sequence: TAGACAGCTTGGTCTA
Locus tag: CE1723
CE1723 -73 5.5 TAGACAGCTTGGTCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: metK
Ortholog function: S-adenosylmethionine synthetase (EC 2.5.1.6)
Corynebacterium amycolatum SK46 CORAM0001_0910 -98 4.8 TGAACCGCTTGGTCTA
Corynebacterium aurimucosum ATCC 700975 cauri_1185 -97 5.4 TAGACCGCTTGGTCTA
Corynebacterium diphtheriae NCTC 13129 DIP1325 -116 5.5 TAGACAGCTTGGTCTA
Corynebacterium efficiens YS-314 CE1723 -73 5.5 TAGACAGCTTGGTCTA
Corynebacterium glutamicum ATCC 13032 cg1806 -74 5.5 TAGACAGCTTGGTCTA
Corynebacterium jeikeium K411 jk1016 -75 5.2 CAGACAGCTTGGTCTA
Corynebacterium kroppenstedtii DSM 44385 ckrop_0984 -98 5.5 TAGACAGCTTGGTCTA
Corynebacterium urealyticum DSM 7109 cur_0975 -110 5.4 TAGACCGCTTGGTCTA
Position: -71
Score: 5.5
Sequence: TAGACAGATTGGTCTA
Locus tag: CE2334
CE2334 -71 5.5 TAGACAGATTGGTCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cg2678
Ortholog function: Predicted ABC transporter, substrate-binding protein
Corynebacterium aurimucosum ATCC 700975 cauri_2043 -36 5 TAGACTGTGCTGTCTA
Corynebacterium efficiens YS-314 CE2334 -71 5.5 TAGACAGATTGGTCTA
-48 4.2 AGTACCGATCAGTCTA
Corynebacterium glutamicum ATCC 13032 cg2678 -112 4.8 TAGACAGGTTGGTCTG
-90 4.9 TATACCGATCAGTCTA
Corynebacterium urealyticum DSM 7109 cur_0251 -41 5 TAGACAGATCTGTTCA
Position: -52
Score: 5.3
Sequence: TAGACCAATCTGTCTA
Locus tag: CE2335
CE2335 -52 5.3 TAGACCAATCTGTCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cg2679
Ortholog function: Conserved hypothetical protein
Corynebacterium aurimucosum ATCC 700975 cauri_2044 -36 5 TAGACAGCACAGTCTA
Corynebacterium efficiens YS-314 CE2335 -75 4.1 TAGACTGATCGGTACT
-52 5.3 TAGACCAATCTGTCTA
Corynebacterium glutamicum ATCC 13032 cg2679 -72 5 TAGACTGATCGGTATA
-50 4.4 CAGACCAACCTGTCTA
Corynebacterium urealyticum DSM 7109 cur_0252 -61 4.9 TGAACAGATCTGTCTA
Position: 1
Score: 5.3
Sequence: TGGACAGCTTGGTCTA
Locus tag: CE2343
CE2343 1 5.3 TGGACAGCTTGGTCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: metB
Ortholog function: Cystathionine gamma-synthase (EC 2.5.1.48)
Corynebacterium aurimucosum ATCC 700975 cauri_2045 -28 4.9 TGAACAGCTTGGTCTA
Corynebacterium efficiens YS-314 CE2343 1 5.3 TGGACAGCTTGGTCTA
Corynebacterium glutamicum ATCC 13032 cg2687 -78 5.3 TGGACAGCTTGGTCTA
Corynebacterium jeikeium K411 jk0055 -108 5.3 TAGACTGCTTGGTCTA
Position: -171
Score: 3.8
Sequence: CAAACCTAACAGTCTA
Position: -148
Score: 4.7
Sequence: TAGACCGATCCGTCTG
Locus tag: CE2446
CE2446 -171 3.8 CAAACCTAACAGTCTA
-148 4.7 TAGACCGATCCGTCTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: cysK
Ortholog function: Cysteine synthase (EC 2.5.1.47)
Corynebacterium amycolatum SK46 CORAM0001_2226 -103 3.9 TAGACGAACTGGTCTG
Corynebacterium aurimucosum ATCC 700975 cauri_2144 -74 4.8 TATACCACTCAGTCTA
Corynebacterium diphtheriae NCTC 13129 DIP1890 -152 4.5 TAGACCGATCGGTACG
-130 4.6 AAGACAATTCTGTCTA
Corynebacterium efficiens YS-314 CE2446 -148 4.7 TAGACCGATCCGTCTG
Corynebacterium glutamicum ATCC 13032 cg2833 -150 4.6 TGAACAGAACTGTCTA
Corynebacterium jeikeium K411 jk0394 -35 5.2 TAGACCGATCAGTCTA
Corynebacterium kroppenstedtii DSM 44385 ckrop_0419 -152 4.8 CAGACCGATCTGTCTG
Corynebacterium urealyticum DSM 7109 cur_1592 -60 5.3 TAGACAGATCAGTCTA
Position: -281
Score: 4.4
Sequence: CCGACCACTCTGTCTA
Position: -247
Score: 5.1
Sequence: TAGACCGCTTGGTCTG
Position: -163
Score: 4.4
Sequence: TAGACCGTCCAGTCTA
Position: -46
Score: 4.6
Sequence: TAGACAGATCGGTACG
Locus tag: CE2644
CE2644 -281 4.4 CCGACCACTCTGTCTA
-247 5.1 TAGACCGCTTGGTCTG
-163 4.4 TAGACCGTCCAGTCTA
-46 4.6 TAGACAGATCGGTACG
Supported by regulated orthologs from reference regulons
Ortholog gene name: cysI
Ortholog function: Ferredoxin--sulfite reductase, actinobacterial type (EC 1.8.7.1)
Corynebacterium amycolatum SK46 CORAM0001_1359 -113 4.7 CAGACTGGTCGGTCTA
-77 5.1 TAGACCAAACGGTCTA
Corynebacterium aurimucosum ATCC 700975 cauri_0665 -65 4.4 AAGACTGCTTTGTCTG
Corynebacterium efficiens YS-314 CE2644 -281 4.4 CCGACCACTCTGTCTA
-247 5.1 TAGACCGCTTGGTCTG
-163 4.4 TAGACCGTCCAGTCTA
-46 4.6 TAGACAGATCGGTACG
Corynebacterium glutamicum ATCC 13032 cg3118 -286 5.1 TAGACCGCTTGGTCTG
-201 5.6 TAGACAGATCGGTCTA
-83 4.5 TAGACAGAGCGGTACG
Corynebacterium jeikeium K411 jk0243 -114 5.4 TAGACAACTCTGTCTA
-34 5 CAGACAGATCAGTCTA
Corynebacterium urealyticum DSM 7109 cur_1757 -181 5.2 TAGACAGCATTGTCTA
-97 4.9 TAGACCGCACGGTCTG
Position: -329
Score: 4.6
Sequence: CGTACCGATCTGTCTA
Position: -212
Score: 4.7
Sequence: TAGACTGGACGGTCTA
Position: -128
Score: 5
Sequence: CAGACCAAGCGGTCTA
Position: -94
Score: 4.4
Sequence: TAGACAGAGTGGTCGG
Locus tag: CE2645
CE2645 -329 4.6 CGTACCGATCTGTCTA
-212 4.7 TAGACTGGACGGTCTA
-128 5 CAGACCAAGCGGTCTA
-94 4.4 TAGACAGAGTGGTCGG
Supported by regulated orthologs from reference regulons
Ortholog gene name: cysJ
Ortholog function: Ferredoxin--NADP reductase (EC 1.18.1.2)
Corynebacterium aurimucosum ATCC 700975 cauri_0664 -180 4.3 CAGACAAAGCAGTCTT
Corynebacterium efficiens YS-314 CE2645 -212 4.7 TAGACTGGACGGTCTA
-128 5 CAGACCAAGCGGTCTA
-94 4.4 TAGACAGAGTGGTCGG
Corynebacterium glutamicum ATCC 13032 cg3119 -197 5.4 TAGACCGATCTGTCTA
-112 5 CAGACCAAGCGGTCTA
Position: -99
Score: 4.9
Sequence: TAGACCTCTCTGTCTA
Locus tag: CE2728
CE2728 -99 4.9 TAGACCTCTCTGTCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: CE2728
Ortholog function: Predicted permease protein
Corynebacterium amycolatum SK46 CORAM0001_2013 -163 4 TATACGGTTCGGTCTG
-65 4.6 TAGACAGGTCTGTTCA
Corynebacterium efficiens YS-314 CE2728 -99 4.9 TAGACCTCTCTGTCTA
Corynebacterium jeikeium K411 jk0156 -41 4.7 CAGACAGATCGGTTCA
Corynebacterium kroppenstedtii DSM 44385 ckrop_0159 -153 5.6 TAGACAGATCGGTCTA
Corynebacterium urealyticum DSM 7109 cur_0176 -183 4.8 TAGACCGCATGGTCTG
-105 4.6 TAGACAGTTCGGTATG
-39 5 TAGACAGATCGGTTCA