Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of DVU1063 regulog to Desulfovibrio magneticus RS-1

Reference regulog properties
Source regulog: DVU1063 - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator
Biological process: Motility
Effector:
Phylum: Proteobacteria/Delta
Propagated regulon:
Target genome Desulfovibrio magneticus RS-1
Orthologous TF(s) DMR_13610
Regulated genes 5
Built upon 86 sites [see more]
Predicted regulatory interactions in Desulfovibrio magneticus RS-1
Locus tag Position Score Sequence
Position: -27
Score: 4.6
Sequence: GGAATTTTTTGCC
Locus tag: DMR_03980
DMR_03980 -27 4.6 GGAATTTTTTGCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fliD
Ortholog function: Flagellar hook-associated protein FliD
Desulfovibrio desulfuricans G20 Dde_1120 -170 3.8 GTAAAGTTCTGCC
-26 4.6 GGAAAAAAATGCC
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_0530 -243 3.8 TGCAAAAATTTCA
-101 4.6 GGCAAAAAATGCC
Desulfovibrio magneticus RS-1 DMR_03980 -27 4.6 GGAATTTTTTGCC
Desulfovibrio salexigens DSM 2638 Desal_1249 -24 4.6 GGAAAAAAATTCC
Desulfovibrio vulgaris Hildenborough DVU0863 -29 4.7 GGCAAAAACTTCC
Desulfovibrio vulgaris str. Miyazaki F DvMF_2912 -29 4.7 GGAAATTTCTTCC
Position: -62
Score: 4.6
Sequence: GGAAAATAATTCC
Locus tag: DMR_10270
DMR_10270 -62 4.6 GGAAAATAATTCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: Ddes_1028
Ortholog function: flagellin domain protein
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_1028 -186 4.2 CGCAAATTTTTCC
-119 4.6 GGAAAAAAATTCC
Desulfovibrio magneticus RS-1 DMR_10270 -62 4.6 GGAAAATAATTCC
-18 4 GGAAGGAGATGCC
Position: 1
Score: 4.4
Sequence: TGCAAATTCTTCC
Locus tag: DMR_13730
DMR_13730 1 4.4 TGCAAATTCTTCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fliK
Ortholog function: Flagellar hook-length control protein FliK
Desulfovibrio magneticus RS-1 DMR_13730 -108 3.8 GGAAAAAAACTCC
1 4.4 TGCAAATTCTTCC
Desulfovibrio salexigens DSM 2638 Desal_3007 -129 4.1 TGAATTATTTTCC
-109 4.7 GGAAGAATATTCC
1 4.2 TGAAAATACTTCC
Position: -118
Score: 4.6
Sequence: GGCAAAAAATGCC
Locus tag: DMR_39260
DMR_39260 -118 4.6 GGCAAAAAATGCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU1032
Ortholog function: Conserved hypothetical protein
Desulfomicrobium baculatum DSM 4028 Dbac_2476 -112 4.1 GGCAAACCTTTCC
Desulfovibrio desulfuricans G20 Dde_1455 -119 4 GGTATTTTTTTCC
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_0763 -125 4.9 GGAAAAATTTTCC
Desulfovibrio magneticus RS-1 DMR_39260 -118 4.6 GGCAAAAAATGCC
Desulfovibrio salexigens DSM 2638 Desal_0181 -123 4.7 GGCAGTTTTTTCC
Desulfovibrio vulgaris Hildenborough DVU1032 -118 4.7 GGCAGTTTTTTCC
Desulfovibrio vulgaris str. Miyazaki F DvMF_0905 -126 4.5 GGCAGCTTTTTCC
Lawsonia intracellularis PHE/MN1-00 LI0887 -121 4.6 GGAATTTTTTGCC
Position: -118
Score: 4.6
Sequence: GGCAAAAAATGCC
Locus tag: DMR_45020
DMR_45020 -118 4.6 GGCAAAAAATGCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: flgB
Ortholog function: Flagellar basal-body rod protein FlgB
Desulfohalobium retbaense DSM 5692 Dret_0653 -273 3.9 GGAAAGTCGTGCC
Desulfovibrio desulfuricans G20 Dde_0356 -269 4.3 GGAACTTTTTTCC
Desulfovibrio magneticus RS-1 DMR_45020 -118 4.6 GGCAAAAAATGCC
Desulfovibrio salexigens DSM 2638 Desal_1156 -275 3.9 GGCATTTTTTTCG
-26 4.1 GGAATTTTTTGCA
Desulfovibrio vulgaris Hildenborough DVU0316 -41 4 GGCAACGTCTGCC
Desulfovibrio vulgaris str. Miyazaki F DvMF_2284 -262 4.6 GGCAAATCCTGCC
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