Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of ModE2 regulog to Desulfovibrio magneticus RS-1

Reference regulog properties
Source regulog: ModE2 - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: ModE
Regulation mode: repressor
Biological process: Molybdopterin biosynthesis; Molybdenum homeostasis
Effector: Molybdenum
Phylum: Proteobacteria/delta
Propagated regulon:
Target genome Desulfovibrio magneticus RS-1
Orthologous TF(s) DMR_43980
Regulated genes 7
Built upon 48 sites [see more]
Predicted regulatory interactions in Desulfovibrio magneticus RS-1
Locus tag Position Score Sequence
Position: -327
Score: 4.2
Sequence: ATAATATTTAAAATAACATAGT
Locus tag: DMR_02370
DMR_02370 -327 4.2 ATAATATTTAAAATAACATAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: DMR_02370
Ortholog function: putative tungsten-containing aldehyde ferredoxin oxidoreductase
Desulfovibrio magneticus RS-1 DMR_02370 -327 4.2 ATAATATTTAAAATAACATAGT
Desulfovibrio vulgaris str. Miyazaki F DvMF_1956 -310 4.7 AATGTGTCACCATTGACATAGT
-258 4.6 CCTATGTCATGCAAGGCATAAA
Position: -35
Score: 4
Sequence: ATTATGTTAAGTTAAATTTGAC
Position: -30
Score: 4.1
Sequence: GTTAAGTTAAATTTGACAGAGG
Locus tag: DMR_12510
DMR_12510 -35 4 ATTATGTTAAGTTAAATTTGAC
-30 4.1 GTTAAGTTAAATTTGACAGAGG
Supported by regulated orthologs from reference regulons
Ortholog gene name: tupB
Ortholog function: ABC-type tungstate transport system, periplasmic binding protein
Desulfomicrobium baculatum DSM 4028 Dbac_3402 -62 5 CTTGTGTCTGATTTGGCATATG
-32 4.4 CGTATGTCATTTTTCACTTAAC
Desulfovibrio desulfuricans G20 Dde_0234 -65 4.4 ATTGTGTTTTATTTAGCTGATT
Desulfovibrio magneticus RS-1 DMR_12510 -30 4.1 GTTAAGTTAAATTTGACAGAGG
Position: -81
Score: 4.6
Sequence: CGTGTGCCTGATTAGACATAAC
Locus tag: DMR_15760
DMR_15760 -81 4.6 CGTGTGCCTGATTAGACATAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fdnG
Ortholog function: formate dehydrogenase alpha subunit
Desulfovibrio magneticus RS-1 DMR_15760 -226 4.4 TTTGTATTTAAAATAACTTAAT
-81 4.6 CGTGTGCCTGATTAGACATAAC
Position: -142
Score: 5.4
Sequence: AATGTGTTAATAATAACATAAC
Locus tag: DMR_17150
DMR_17150 -142 5.4 AATGTGTTAATAATAACATAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: mop
Ortholog function: molybdenum-pterin binding protein
Desulfovibrio magneticus RS-1 DMR_17150 -142 5.4 AATGTGTTAATAATAACATAAC
Position: -312
Score: 4.8
Sequence: GTTGTGTCAAAACAGACAGAAG
Locus tag: DMR_17520
DMR_17520 -312 4.8 GTTGTGTCAAAACAGACAGAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: nifE
Ortholog function: Nitrogenase FeMo-cofactor scaffold and assembly protein NifE
Desulfovibrio magneticus RS-1 DMR_17520 -312 4.8 GTTGTGTCAAAACAGACAGAAG
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