Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Rex regulog to Desulfovibrio piger ATCC 29098

Reference regulog properties
Source regulog: Rex - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Phylum: Proteobacteria/delta
Propagated regulon:
Target genome Desulfovibrio piger ATCC 29098
Orthologous TF(s) DESPIG_02066
Regulated genes 4
Built upon 107 sites [see more]
Predicted regulatory interactions in Desulfovibrio piger ATCC 29098
Locus tag Position Score Sequence
Position: -55
Score: 4.7
Sequence: TCTGTTCTTTTTTGCACAAA
Locus tag: DESPIG_01460
DESPIG_01460 -55 4.7 TCTGTTCTTTTTTGCACAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: adk
Ortholog function: Adenylate kinase (EC 2.7.4.3)
Desulfohalobium retbaense DSM 5692 Dret_1683 -29 4.8 TTTGTGAAATTTTTCTTCAG
Desulfomicrobium baculatum DSM 4028 Dbac_0784 -31 5.2 TTTGTGAAATTTTTTACAGG
Desulfovibrio desulfuricans G20 Dde_2028 -12 5.1 TTCGTGAAATAAATGACAAG
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_1956 -51 4.6 TGTGTTCTTTTTTGCACAAT
Desulfovibrio magneticus RS-1 DMR_16390 -32 4.3 ATTGTGAAAAATCAAACATG
Desulfovibrio piger ATCC 29098 DESPIG_01460 -55 4.7 TCTGTTCTTTTTTGCACAAA
Desulfovibrio salexigens DSM 2638 Desal_1973 -39 5.1 TTTGTGAAATTTGTTACTAA
Desulfovibrio vulgaris Hildenborough DVU1932 -30 5 CTCGTGAAATTAATGACAAG
Desulfovibrio vulgaris str. Miyazaki F DvMF_0293 -30 5.1 CTCGTGAAAATTATTACAAG
Position: -99
Score: 5
Sequence: TTTGCGAATTTTGTCACCAA
Locus tag: DESPIG_02016
DESPIG_02016 -99 5 TTTGCGAATTTTGTCACCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: atpF1
Ortholog function: ATP synthase B' chain (EC 3.6.3.14)
Desulfohalobium retbaense DSM 5692 Dret_2217 -35 4.3 TTTGAACCAAAATTCACATA
Desulfomicrobium baculatum DSM 4028 Dbac_3361 -36 4.9 TTTGAACAAAAATTCACAAC
Desulfovibrio desulfuricans G20 Dde_0990 -121 5 TTCAGGAAATTTTTCACAAG
-38 4.9 TTTGAGCTTAAATTCACAAC
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_2183 -113 5 CTTGCGAAATTTGTCACCAA
Desulfovibrio magneticus RS-1 DMR_04760 -163 4.6 TTCGGTCAATTCTTCACAAA
-36 5.1 TTTGCAAAAATTTTCACAAC
Desulfovibrio piger ATCC 29098 DESPIG_02016 -99 5 TTTGCGAATTTTGTCACCAA
Desulfovibrio salexigens DSM 2638 Desal_3459 -150 4.5 TTAGTTAAAAAAATAACAAG
-36 4.8 TTTGGACAAAAATTCACAAC
Desulfovibrio vulgaris Hildenborough DVU0780 -59 5 TTTGAGCTTTAATTCACAAC
Desulfovibrio vulgaris str. Miyazaki F DvMF_2826 -38 4.9 TTTGAGCTTAAATTCACAAC
Position: -11
Score: 4.7
Sequence: ATTGTGATAATTTGTACATT
Locus tag: DESPIG_02071
DESPIG_02071 -11 4.7 ATTGTGATAATTTGTACATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: atpI1
Ortholog function: ATP synthase protein I
Desulfohalobium retbaense DSM 5692 Dret_2089 -11 4.6 CTTGTGAATGAATGCACGAA
Desulfomicrobium baculatum DSM 4028 Dbac_2797 -56 5.1 TTTGTGATTTATTGCACGAA
Desulfovibrio desulfuricans G20 Dde_2698 -151 4.8 CTTGTGAAAAATTTCTAAAA
-68 4.1 CTTGTGAAGGAATGCACGAA
Desulfovibrio magneticus RS-1 DMR_42140 -76 4.4 CTTGTGAACTTGTGCACGAG
Desulfovibrio piger ATCC 29098 DESPIG_02071 -11 4.7 ATTGTGATAATTTGTACATT
Desulfovibrio salexigens DSM 2638 Desal_3727 -74 4.1 CTTGTGAAGGTTTGCGCAAA
Desulfovibrio vulgaris Hildenborough DVU0920 61 4.2 CTTGTGAACGATTGCACGAA
Desulfovibrio vulgaris str. Miyazaki F DvMF_1386 -148 4.1 GTGGGGAATTTTTTCACGAA
-76 4.3 CTTGTGAACGTTTGCACGAA
Position: -142
Score: 4.4
Sequence: CTTGTTACTAAAAACACAAG
Locus tag: DESPIG_02774
DESPIG_02774 -142 4.4 CTTGTTACTAAAAACACAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: apsB
Ortholog function: Adenylylsulfate reductase beta-subunit (EC 1.8.99.2)
Desulfohalobium retbaense DSM 5692 Dret_1967 -167 4.4 CTTGCGCTAAATTTCACTTT
Desulfomicrobium baculatum DSM 4028 Dbac_3197 -95 5.2 TTTGATAAAAGATTCACAAG
Desulfovibrio desulfuricans G20 Dde_1109 -188 5.6 TTTGTTAAATATCTCACAAG
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_2130 -140 4.4 CTTGTTACTAATTGCGCAAG
Desulfovibrio magneticus RS-1 DMR_05390 -279 4.4 CTTGTTAAACCGATCACAAG
Desulfovibrio piger ATCC 29098 DESPIG_02774 -142 4.4 CTTGTTACTAAAAACACAAG
Desulfovibrio salexigens DSM 2638 Desal_0229 -146 4.7 CTTGTTCTAAATTTCACTTT
Desulfovibrio vulgaris Hildenborough DVU0846 -168 4.6 ATTGTTAATTCCATCACAAG
Desulfovibrio vulgaris str. Miyazaki F DvMF_2892 -171 5.1 ATTGTTAAATCAGTCACAAG
© 2009-2020 RegPrecise