Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of ModE2 regulog to Desulfomicrobium baculatum DSM 4028

Reference regulog properties
Source regulog: ModE2 - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: ModE
Regulation mode: repressor
Biological process: Molybdopterin biosynthesis; Molybdenum homeostasis
Effector: Molybdenum
Phylum: Proteobacteria/delta
Propagated regulon:
Target genome Desulfomicrobium baculatum DSM 4028
Orthologous TF(s) Dbac_0983, Dbac_1565
Regulated genes 6
Built upon 48 sites [see more]
Predicted regulatory interactions in Desulfomicrobium baculatum DSM 4028
Locus tag Position Score Sequence
Position: -38
Score: 4.2
Sequence: AATCTGTTTGAAATAACACGTT
Locus tag: Dbac_1562
Dbac_1562 -38 4.2 AATCTGTTTGAAATAACACGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: mop
Ortholog function: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding
Desulfohalobium retbaense DSM 5692 Dret_1808 -166 4.6 GCTATGCAAAAAATCACATAAG
Desulfomicrobium baculatum DSM 4028 Dbac_1562 -192 5 GTTATGCCTTTCCGGGCATATT
-63 5.4 GATATGTCAATATTGACATGTT
Desulfovibrio desulfuricans G20 Dde_3539 -66 4.7 AATATGCCTGCACAGGCATATG
Desulfovibrio salexigens DSM 2638 Desal_0299 -336 5.2 ATTATGTCATTTTGGACCTAAT
-114 5.2 ATTATGTCTTTTTTGATATATC
Desulfovibrio vulgaris Hildenborough DVU1559 -111 4.3 GTTATGCAAGTCTGTGCATAAG
Position: -192
Score: 5
Sequence: GTTATGCCTTTCCGGGCATATT
Position: -63
Score: 5.4
Sequence: GATATGTCAATATTGACATGTT
Position: -33
Score: 4.6
Sequence: ATAATGCCAAATATGATACATT
Locus tag: Dbac_1563
Dbac_1563 -192 5 GTTATGCCTTTCCGGGCATATT
-63 5.4 GATATGTCAATATTGACATGTT
-33 4.6 ATAATGCCAAATATGATACATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU1560
Ortholog function: molybdopterin binding domain protein
Desulfohalobium retbaense DSM 5692 Dret_1807 -166 4.6 GCTATGCAAAAAATCACATAAG
Desulfomicrobium baculatum DSM 4028 Dbac_1563 -192 5 GTTATGCCTTTCCGGGCATATT
-63 5.4 GATATGTCAATATTGACATGTT
Position: -227
Score: 5
Sequence: ATGATGCCAAACAAGGCATAAT
Locus tag: Dbac_1566
Dbac_1566 -227 5 ATGATGCCAAACAAGGCATAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fmdE
Ortholog function: Formylmethanofuran dehydrogenase subunit E
Desulfomicrobium baculatum DSM 4028 Dbac_1566 -227 5 ATGATGCCAAACAAGGCATAAT
Position: -125
Score: 4.8
Sequence: TATGTATTATTTATAACATATT
Locus tag: Dbac_1570
Dbac_1570 -125 4.8 TATGTATTATTTATAACATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fdnG-3
Ortholog function: formate dehydrogenase, alpha subunit
Desulfomicrobium baculatum DSM 4028 Dbac_1570 -125 4.8 TATGTATTATTTATAACATATT
Desulfovibrio magneticus RS-1 DMR_15750 -226 4.4 TTTGTATTTAAAATAACTTAAT
-81 4.6 CGTGTGCCTGATTAGACATAAC
Position: -76
Score: 4.4
Sequence: TTTCTGTCTTTGTTGACTTAAA
Locus tag: Dbac_2354
Dbac_2354 -76 4.4 TTTCTGTCTTTGTTGACTTAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: wtpA
Ortholog function: ABC-type tungstate/molybdate transport system, periplasmic component
Desulfohalobium retbaense DSM 5692 Dret_0525 -32 4.4 TATATGTCTTTTTTAGCAAAGG
Desulfomicrobium baculatum DSM 4028 Dbac_2354 -76 4.4 TTTCTGTCTTTGTTGACTTAAA
Desulfovibrio salexigens DSM 2638 Desal_2416 -106 5 ATTATGCTCTCCATGACATATG
Position: -62
Score: 5
Sequence: CTTGTGTCTGATTTGGCATATG
Position: -32
Score: 4.4
Sequence: CGTATGTCATTTTTCACTTAAC
Locus tag: Dbac_3402
Dbac_3402 -62 5 CTTGTGTCTGATTTGGCATATG
-32 4.4 CGTATGTCATTTTTCACTTAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: tupB
Ortholog function: ABC-type tungstate transport system, periplasmic binding protein
Desulfomicrobium baculatum DSM 4028 Dbac_3402 -62 5 CTTGTGTCTGATTTGGCATATG
-32 4.4 CGTATGTCATTTTTCACTTAAC
Desulfovibrio desulfuricans G20 Dde_0234 -65 4.4 ATTGTGTTTTATTTAGCTGATT
Desulfovibrio magneticus RS-1 DMR_12510 -30 4.1 GTTAAGTTAAATTTGACAGAGG
© 2009-2020 RegPrecise