Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of ModE2 regulog to Desulfovibrio vulgaris str. DP4

Reference regulog properties
Source regulog: ModE2 - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: ModE
Regulation mode: repressor
Biological process: Molybdopterin biosynthesis; Molybdenum homeostasis
Effector: Molybdenum
Phylum: Proteobacteria/delta
Propagated regulon:
Target genome Desulfovibrio vulgaris str. DP4
Orthologous TF(s) Dvul_1394, Dvul_1572
Regulated genes 5
Built upon 48 sites [see more]
Predicted regulatory interactions in Desulfovibrio vulgaris str. DP4
Locus tag Position Score Sequence
Position: -333
Score: 4.2
Sequence: TATATGTTTTATTTAACCTACT
Locus tag: Dvul_0501
Dvul_0501 -333 4.2 TATATGTTTTATTTAACCTACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fdnG-3
Ortholog function: formate dehydrogenase, alpha subunit
Desulfovibrio desulfuricans G20 Dde_3513 -133 5.2 GTTGTGTTAATATTAACACATT
Desulfovibrio salexigens DSM 2638 Desal_2659 -127 5 TATGTGCTAAATCTAACATATT
Desulfovibrio vulgaris Hildenborough DVU2812 -333 4.2 TATATGTTTTATTTAACCTACT
Position: -332
Score: 4.8
Sequence: TCTATGTTTTTTCTGGCATATG
Locus tag: Dvul_0825
Dvul_0825 -332 4.8 TCTATGTTTTTTCTGGCATATG
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU2405
Ortholog function: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
Desulfovibrio vulgaris Hildenborough DVU2405 -332 4.8 TCTATGTTTTTTCTGGCATATG
Desulfovibrio vulgaris str. Miyazaki F DvMF_0321 -331 5.2 ATTATGCTTTTTCAGACATATG
Position: -111
Score: 4.3
Sequence: GTTATGCAAGTCTGTGCATAAG
Locus tag: Dvul_1573
Dvul_1573 -111 4.3 GTTATGCAAGTCTGTGCATAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU1560
Ortholog function: molybdopterin binding domain protein
Desulfovibrio desulfuricans G20 Dde_3538 -66 4.7 AATATGCCTGCACAGGCATATG
Desulfovibrio salexigens DSM 2638 Desal_0300 -336 5.2 ATTATGTCATTTTGGACCTAAT
-114 5.2 ATTATGTCTTTTTTGATATATC
Desulfovibrio vulgaris Hildenborough DVU1560 -111 4.3 GTTATGCAAGTCTGTGCATAAG
Position: -80
Score: 4.6
Sequence: TGTGTGTTAATTGTAACATATT
Locus tag: Dvul_2366
Dvul_2366 -80 4.6 TGTGTGTTAATTGTAACATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Dde_0715
Ortholog function: hypothetical protein
Desulfovibrio desulfuricans G20 Dde_0715 -177 5.4 GTTCTGCTATTATTAACATATT
Desulfovibrio desulfuricans G20 Dde_0814 -109 4.6 TTTATGCTTTTTTTAACAAAAA
Desulfovibrio vulgaris Hildenborough DVU0586 -170 4.6 TGTGTGTTAATTGTAACATATT
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