Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of DVU1063 regulog to Lawsonia intracellularis PHE/MN1-00

Reference regulog properties
Source regulog: DVU1063 - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator
Biological process: Motility
Effector:
Phylum: Proteobacteria/Delta
Propagated regulon:
Target genome Lawsonia intracellularis PHE/MN1-00
Orthologous TF(s) LI1115
Regulated genes 4
Built upon 86 sites [see more]
Predicted regulatory interactions in Lawsonia intracellularis PHE/MN1-00
Locus tag Position Score Sequence
Position: -88
Score: 4
Sequence: GGCAAAAATTTCT
Position: -42
Score: 3.9
Sequence: GGTACATTTTGCC
Locus tag: LI0348
LI0348 -88 4 GGCAAAAATTTCT
-42 3.9 GGTACATTTTGCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: flgE
Ortholog function: Flagellar hook protein FlgE
Desulfomicrobium baculatum DSM 4028 Dbac_1614 -50 4.9 GGAAAATTCTGCC
Desulfovibrio desulfuricans G20 Dde_0298 -199 4.6 GGCAACTTTTTCC
-55 4.8 GGCATATTTTGCC
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_2091 -154 4.2 GGAATATTCTGCA
-43 4.5 GGAATGTTTTTCC
Desulfovibrio salexigens DSM 2638 Desal_2938 -180 3.8 GGACTTTTTTTCC
Desulfovibrio vulgaris Hildenborough DVU0307 -27 4.7 GGAATATTCTGCC
Desulfovibrio vulgaris str. Miyazaki F DvMF_1808 -206 4.5 GGCAGGTTCTGCC
-96 4.8 GGAAGAATCTTCC
Lawsonia intracellularis PHE/MN1-00 LI0348 -88 4 GGCAAAAATTTCT
-42 3.9 GGTACATTTTGCC
Position: 1
Score: 4.4
Sequence: TGCAGATTTTTCC
Locus tag: LI0568
LI0568 1 4.4 TGCAGATTTTTCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fliK
Ortholog function: Flagellar hook-length control protein FliK
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_1259 -107 4.5 GGCAATACTTGCC
1 4.2 TGCAGATTATTCC
Desulfovibrio vulgaris Hildenborough DVU1445 -108 4.3 GGCAACACTTGCC
1 4.4 TGAAAATTCTTCC
Desulfovibrio vulgaris str. Miyazaki F DvMF_0248 1 4.3 TGCATATTTTTCC
Lawsonia intracellularis PHE/MN1-00 LI0568 1 4.4 TGCAGATTTTTCC
Position: -8
Score: 4.2
Sequence: GGCACAAAATGCC
Locus tag: LI0746
LI0746 -8 4.2 GGCACAAAATGCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: Dbac_2404
Ortholog function: FlgN family protein
Desulfomicrobium baculatum DSM 4028 Dbac_2404 -193 4.5 GGAAATTCTTGCC
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_2002 -172 4 GGCAGATTCTGCG
-50 4.8 GGCAGATTCTGCC
Lawsonia intracellularis PHE/MN1-00 LI0746 -8 4.2 GGCACAAAATGCC
Position: -121
Score: 4.6
Sequence: GGAATTTTTTGCC
Locus tag: LI0887
LI0887 -121 4.6 GGAATTTTTTGCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU1032
Ortholog function: Conserved hypothetical protein
Desulfomicrobium baculatum DSM 4028 Dbac_2476 -112 4.1 GGCAAACCTTTCC
Desulfovibrio desulfuricans G20 Dde_1455 -119 4 GGTATTTTTTTCC
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_0763 -125 4.9 GGAAAAATTTTCC
Desulfovibrio magneticus RS-1 DMR_39260 -118 4.6 GGCAAAAAATGCC
Desulfovibrio salexigens DSM 2638 Desal_0181 -123 4.7 GGCAGTTTTTTCC
Desulfovibrio vulgaris Hildenborough DVU1032 -118 4.7 GGCAGTTTTTTCC
Desulfovibrio vulgaris str. Miyazaki F DvMF_0905 -126 4.5 GGCAGCTTTTTCC
Lawsonia intracellularis PHE/MN1-00 LI0887 -121 4.6 GGAATTTTTTGCC
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