Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of DVU2934 regulog to Desulfovibrio vulgaris str. Miyazaki F

Reference regulog properties
Source regulog: DVU2934 - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator
Biological process:
Effector:
Phylum: Proteobacteria/delta
Propagated regulon:
Target genome Desulfovibrio vulgaris str. Miyazaki F
Orthologous TF(s) DvMF_1461
Regulated genes 1
Built upon 20 sites [see more]
Predicted regulatory interactions in Desulfovibrio vulgaris str. Miyazaki F
Locus tag Position Score Sequence
Position: -162
Score: 4.6
Sequence: TGTGTGTTTTCCACA
Position: -134
Score: 3.9
Sequence: TGCGCAAAAGCCACA
Position: -115
Score: 4.3
Sequence: TGCGTGAAACACACA
Locus tag: DvMF_1446
DvMF_1446 -162 4.6 TGTGTGTTTTCCACA
-134 3.9 TGCGCAAAAGCCACA
-115 4.3 TGCGTGAAACACACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: lpxC
Ortholog function: UDP-3-0-acyl N-acetylglucosamine deacetylase
Desulfohalobium retbaense DSM 5692 Dret_2081 -136 3.6 TGTCAAAGAACAACA
-114 3.8 TGTGTCAAAGGGACA
Desulfomicrobium baculatum DSM 4028 Dbac_2789 -136 4.2 TGTTGTTTTTTAGCA
Desulfovibrio desulfuricans G20 Dde_2986 -136 4.3 TGTAAAAAAACCACA
-120 4 GGTGTAAAAAACACA
-118 4.2 TGTAAAAAACACACA
Desulfovibrio salexigens DSM 2638 Desal_2604 -161 4 TGCAAAAAAACCACA
-131 4.6 TGTTGTAAAAATACA
-128 3.6 TGTAAAAATACAACT
Desulfovibrio vulgaris Hildenborough DVU2917 -135 3.9 TGTGCAGAACACACA
-117 3.9 TGCGTGGATGACACA
-73 4.5 TGTTTATTTACAGCA
Desulfovibrio vulgaris str. Miyazaki F DvMF_1446 -162 4.6 TGTGTGTTTTCCACA
-160 3.5 TGTGTTTTCCACACC
-134 3.9 TGCGCAAAAGCCACA
-115 4.3 TGCGTGAAACACACA
Lawsonia intracellularis PHE/MN1-00 LI0627 -220 4.8 TGTTGTTAAAAAACA
-217 4.5 TGTTAAAAAACAACA
-158 3.9 CGTTTTATTACAGCA
-117 4.8 TGTTGTAAAAAAACA