Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of TunR regulog to Desulfovibrio vulgaris str. Miyazaki F

Reference regulog properties
Source regulog: TunR - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: TunR
Regulation mode: activator
Biological process: Tungsten homeostasis; Molybdenum homeostasis
Effector: Molybdate; Tungsten
Phylum: Proteobacteria/delta
Propagated regulon:
Target genome Desulfovibrio vulgaris str. Miyazaki F
Orthologous TF(s) DvMF_2813, DvMF_2476
Regulated genes 11
Built upon 37 sites [see more]
Predicted regulatory interactions in Desulfovibrio vulgaris str. Miyazaki F
Locus tag Position Score Sequence
Position: -335
Score: 5.6
Sequence: CGGGCACGATATGTCCTGCTTTCGTGCCTG
Position: -138
Score: 4.6
Sequence: TGGTCACGCGTGTATCGGAATGCGTGTTCC
Locus tag: DvMF_0320
DvMF_0320 -335 5.6 CGGGCACGATATGTCCTGCTTTCGTGCCTG
-138 4.6 TGGTCACGCGTGTATCGGAATGCGTGTTCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: phsA
Ortholog function: thiosulfate reductase
Desulfovibrio vulgaris str. Miyazaki F DvMF_0320 -335 5.6 CGGGCACGATATGTCCTGCTTTCGTGCCTG
-138 4.6 TGGTCACGCGTGTATCGGAATGCGTGTTCC
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_1667 -399 4.3 TGTTCACGAAAATGAAAAATAGCGTGTAAA
Desulfovibrio magneticus RS-1 DMR_08220 -19 5 CAATCACGATTTCCTGCTAGTGCGTGAGAG
Position: -96
Score: 5.9
Sequence: CAGTCACGCGAACCATGCCGGACGTGACCC
Locus tag: DvMF_0650
DvMF_0650 -96 5.9 CAGTCACGCGAACCATGCCGGACGTGACCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: modE
Ortholog function: Molybdate-responsive transcriptional regulator ModE
Desulfovibrio vulgaris str. Miyazaki F DvMF_0650 -96 5.9 CAGTCACGCGAACCATGCCGGACGTGACCC
Position: -83
Score: 6
Sequence: CAGGCACGGCCTGCCGGAAAATCGTGACCG
Locus tag: DvMF_1233
DvMF_1233 -83 6 CAGGCACGGCCTGCCGGAAAATCGTGACCG
Supported by regulated orthologs from reference regulons
Ortholog gene name: fdhE
Ortholog function: formate dehydrogenase formation protein FdhE
Desulfovibrio vulgaris str. Miyazaki F DvMF_1233 -83 6 CAGGCACGGCCTGCCGGAAAATCGTGACCG
Position: -243
Score: 5.6
Sequence: ATGTCACGCCAAGTCGCGCTTCCGTGACTG
Locus tag: DvMF_1613
DvMF_1613 -243 5.6 ATGTCACGCCAAGTCGCGCTTCCGTGACTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU0175
Ortholog function: tungsten formylmethanofuran dehydrogenase family protein/molybdopterin binding protein
Desulfovibrio vulgaris str. Miyazaki F DvMF_1613 -371 4.5 CCTACACGCTTTGCATCCAACCCGTGACCA
-243 5.6 ATGTCACGCCAAGTCGCGCTTCCGTGACTG
Position: -145
Score: 4.9
Sequence: CGGTCACGATAATTTTATTTTGCATGGCTC
Locus tag: DvMF_2403
DvMF_2403 -145 4.9 CGGTCACGATAATTTTATTTTGCATGGCTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: DvMF_2403
Ortholog function: Molybdate-binding domain of ModE
Desulfovibrio vulgaris str. Miyazaki F DvMF_2403 -145 4.9 CGGTCACGATAATTTTATTTTGCATGGCTC
Position: -235
Score: 5.7
Sequence: CAGTCACGAAAAAAACAGCCCAGGTGACCG
Locus tag: DvMF_2475
DvMF_2475 -235 5.7 CAGTCACGAAAAAAACAGCCCAGGTGACCG
Supported by regulated orthologs from reference regulons
Ortholog gene name: DvMF_2475
Ortholog function: COG1720: Uncharacterized conserved protein
Desulfovibrio vulgaris str. Miyazaki F DvMF_2475 -235 5.7 CAGTCACGAAAAAAACAGCCCAGGTGACCG
Position: -108
Score: 5.7
Sequence: CGGTCACCTGGGCTGTTTTTTTCGTGACTG
Locus tag: DvMF_2476
DvMF_2476 -108 5.7 CGGTCACCTGGGCTGTTTTTTTCGTGACTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: TunR
Ortholog function: XerD family transcriptional regulator
Desulfovibrio vulgaris str. Miyazaki F DvMF_2476 -108 5.7 CGGTCACCTGGGCTGTTTTTTTCGTGACTG
Position: -117
Score: 4.6
Sequence: TGTGCACGTTTTCTGCTTGTTTCGTGACTG
Locus tag: DvMF_2780
DvMF_2780 -117 4.6 TGTGCACGTTTTCTGCTTGTTTCGTGACTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: tupB
Ortholog function: ABC-type tungstate transport system, periplasmic binding protein
Desulfovibrio vulgaris str. Miyazaki F DvMF_2780 -117 4.6 TGTGCACGTTTTCTGCTTGTTTCGTGACTG
Position: -157
Score: 5
Sequence: TTGACACGAAGATTATAAAAAACGTGTCAG
Locus tag: DvMF_2812
DvMF_2812 -157 5 TTGACACGAAGATTATAAAAAACGTGTCAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: Ddes_0089
Ortholog function: TSUP family transporter
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_0089 -100 5 TATTCACGATTATTATAAAAACCGTGAACA
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