Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of ModE2 regulog to Desulfovibrio vulgaris str. Miyazaki F

Reference regulog properties
Source regulog: ModE2 - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: ModE
Regulation mode: repressor
Biological process: Molybdopterin biosynthesis; Molybdenum homeostasis
Effector: Molybdenum
Phylum: Proteobacteria/delta
Propagated regulon:
Target genome Desulfovibrio vulgaris str. Miyazaki F
Orthologous TF(s) DvMF_0650
Regulated genes 6
Built upon 48 sites [see more]
Predicted regulatory interactions in Desulfovibrio vulgaris str. Miyazaki F
Locus tag Position Score Sequence
Position: -216
Score: 5.1
Sequence: CATATGTCTGAAAAAGCATAAT
Locus tag: DvMF_0320
DvMF_0320 -216 5.1 CATATGTCTGAAAAAGCATAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: phsA
Ortholog function: molybdopterin oxidoreductase
Desulfovibrio vulgaris str. Miyazaki F DvMF_0320 -216 5.1 CATATGTCTGAAAAAGCATAAT
Position: -331
Score: 5.2
Sequence: ATTATGCTTTTTCAGACATATG
Locus tag: DvMF_0321
DvMF_0321 -331 5.2 ATTATGCTTTTTCAGACATATG
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU2405
Ortholog function: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
Desulfovibrio vulgaris Hildenborough DVU2405 -332 4.8 TCTATGTTTTTTCTGGCATATG
Desulfovibrio vulgaris str. Miyazaki F DvMF_0321 -331 5.2 ATTATGCTTTTTCAGACATATG
Position: -143
Score: 4.3
Sequence: ATTATGTCATTATGAGCAGGTA
Locus tag: DvMF_0650
DvMF_0650 -143 4.3 ATTATGTCATTATGAGCAGGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: modE
Ortholog function: Transcriptional regulator, ModE family
Desulfomicrobium baculatum DSM 4028 Dbac_1565 -227 5 ATGATGCCAAACAAGGCATAAT
Desulfovibrio salexigens DSM 2638 Desal_2665 -48 5.1 ATTGTGCCCTATACGGCATAAT
Desulfovibrio vulgaris str. Miyazaki F DvMF_0650 -143 4.3 ATTATGTCATTATGAGCAGGTA
Position: -310
Score: 4.7
Sequence: AATGTGTCACCATTGACATAGT
Position: -258
Score: 4.6
Sequence: CCTATGTCATGCAAGGCATAAA
Locus tag: DvMF_1956
DvMF_1956 -310 4.7 AATGTGTCACCATTGACATAGT
-258 4.6 CCTATGTCATGCAAGGCATAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: DMR_02370
Ortholog function: putative tungsten-containing aldehyde ferredoxin oxidoreductase
Desulfovibrio magneticus RS-1 DMR_02370 -327 4.2 ATAATATTTAAAATAACATAGT
Desulfovibrio vulgaris str. Miyazaki F DvMF_1956 -310 4.7 AATGTGTCACCATTGACATAGT
-258 4.6 CCTATGTCATGCAAGGCATAAA
Position: -179
Score: 4.7
Sequence: ATTCTGTCAGGATAGGCATATA
Locus tag: DvMF_2533
DvMF_2533 -179 4.7 ATTCTGTCAGGATAGGCATATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fdnG-2
Ortholog function: formate dehydrogenase alpha subunit
Desulfovibrio vulgaris str. Miyazaki F DvMF_2533 -179 4.7 ATTCTGTCAGGATAGGCATATA
Position: -227
Score: 4.5
Sequence: GTTCTGTTTTTTTCAACATGTT
Locus tag: DvMF_2780
DvMF_2780 -227 4.5 GTTCTGTTTTTTTCAACATGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: tupB
Ortholog function: ABC-type tungstate transport system, periplasmic binding protein
Desulfovibrio salexigens DSM 2638 Desal_2876 -245 4.1 GATATATTTTAAACAGCATAGG
-136 4.8 ATTGTGCTCATATTGACATAGA
Desulfovibrio vulgaris str. Miyazaki F DvMF_2780 -227 4.5 GTTCTGTTTTTTTCAACATGTT
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