Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of DVU1063 regulog to Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Reference regulog properties
Source regulog: DVU1063 - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator
Biological process: Motility
Effector:
Phylum: Proteobacteria/Delta
Propagated regulon:
Target genome Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
Orthologous TF(s) Ddes_2381
Regulated genes 7
Built upon 86 sites [see more]
Predicted regulatory interactions in Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
Locus tag Position Score Sequence
Position: -101
Score: 4.6
Sequence: GGCAAAAAATGCC
Locus tag: Ddes_0530
Ddes_0530 -101 4.6 GGCAAAAAATGCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fliD
Ortholog function: Flagellar hook-associated protein FliD
Desulfovibrio desulfuricans G20 Dde_1120 -170 3.8 GTAAAGTTCTGCC
-26 4.6 GGAAAAAAATGCC
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_0530 -243 3.8 TGCAAAAATTTCA
-101 4.6 GGCAAAAAATGCC
Desulfovibrio magneticus RS-1 DMR_03980 -27 4.6 GGAATTTTTTGCC
Desulfovibrio salexigens DSM 2638 Desal_1249 -24 4.6 GGAAAAAAATTCC
Desulfovibrio vulgaris Hildenborough DVU0863 -29 4.7 GGCAAAAACTTCC
Desulfovibrio vulgaris str. Miyazaki F DvMF_2912 -29 4.7 GGAAATTTCTTCC
Position: -125
Score: 4.9
Sequence: GGAAAAATTTTCC
Locus tag: Ddes_0763
Ddes_0763 -125 4.9 GGAAAAATTTTCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU1032
Ortholog function: Conserved hypothetical protein
Desulfomicrobium baculatum DSM 4028 Dbac_2476 -112 4.1 GGCAAACCTTTCC
Desulfovibrio desulfuricans G20 Dde_1455 -119 4 GGTATTTTTTTCC
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_0763 -125 4.9 GGAAAAATTTTCC
Desulfovibrio magneticus RS-1 DMR_39260 -118 4.6 GGCAAAAAATGCC
Desulfovibrio salexigens DSM 2638 Desal_0181 -123 4.7 GGCAGTTTTTTCC
Desulfovibrio vulgaris Hildenborough DVU1032 -118 4.7 GGCAGTTTTTTCC
Desulfovibrio vulgaris str. Miyazaki F DvMF_0905 -126 4.5 GGCAGCTTTTTCC
Lawsonia intracellularis PHE/MN1-00 LI0887 -121 4.6 GGAATTTTTTGCC
Position: -119
Score: 4.6
Sequence: GGAAAAAAATTCC
Locus tag: Ddes_1028
Ddes_1028 -119 4.6 GGAAAAAAATTCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: Ddes_1028
Ortholog function: flagellin domain protein
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_1028 -186 4.2 CGCAAATTTTTCC
-119 4.6 GGAAAAAAATTCC
Desulfovibrio magneticus RS-1 DMR_10270 -62 4.6 GGAAAATAATTCC
-18 4 GGAAGGAGATGCC
Position: -107
Score: 4.5
Sequence: GGCAATACTTGCC
Position: 1
Score: 4.2
Sequence: TGCAGATTATTCC
Locus tag: Ddes_1259
Ddes_1259 -107 4.5 GGCAATACTTGCC
1 4.2 TGCAGATTATTCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fliK
Ortholog function: Flagellar hook-length control protein FliK
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_1259 -107 4.5 GGCAATACTTGCC
1 4.2 TGCAGATTATTCC
Desulfovibrio vulgaris Hildenborough DVU1445 -108 4.3 GGCAACACTTGCC
1 4.4 TGAAAATTCTTCC
Desulfovibrio vulgaris str. Miyazaki F DvMF_0248 1 4.3 TGCATATTTTTCC
Lawsonia intracellularis PHE/MN1-00 LI0568 1 4.4 TGCAGATTTTTCC
Position: -151
Score: 4
Sequence: GCAATATTTTTCC
Locus tag: Ddes_1575
Ddes_1575 -151 4 GCAATATTTTTCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: flgC
Ortholog function: Flagellar basal-body rod protein FlgC
Desulfohalobium retbaense DSM 5692 Dret_0654 -273 3.9 GGAAAGTCGTGCC
Desulfovibrio desulfuricans G20 Dde_0355 -269 4.3 GGAACTTTTTTCC
Desulfovibrio magneticus RS-1 DMR_45030 -118 4.6 GGCAAAAAATGCC
Desulfovibrio salexigens DSM 2638 Desal_1155 -49 4.5 GGAAAAATTTTCA
Desulfovibrio vulgaris Hildenborough DVU0315 -41 4 GGCAACGTCTGCC
Desulfovibrio vulgaris str. Miyazaki F DvMF_2285 -262 4.6 GGCAAATCCTGCC
Position: -50
Score: 4.8
Sequence: GGCAGATTCTGCC
Locus tag: Ddes_2002
Ddes_2002 -50 4.8 GGCAGATTCTGCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: Dbac_2404
Ortholog function: FlgN family protein
Desulfomicrobium baculatum DSM 4028 Dbac_2404 -193 4.5 GGAAATTCTTGCC
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_2002 -172 4 GGCAGATTCTGCG
-50 4.8 GGCAGATTCTGCC
Lawsonia intracellularis PHE/MN1-00 LI0746 -8 4.2 GGCACAAAATGCC
Position: -43
Score: 4.5
Sequence: GGAATGTTTTTCC
Locus tag: Ddes_2091
Ddes_2091 -43 4.5 GGAATGTTTTTCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: flgE
Ortholog function: Flagellar hook protein FlgE
Desulfomicrobium baculatum DSM 4028 Dbac_1614 -50 4.9 GGAAAATTCTGCC
Desulfovibrio desulfuricans G20 Dde_0298 -199 4.6 GGCAACTTTTTCC
-55 4.8 GGCATATTTTGCC
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_2091 -154 4.2 GGAATATTCTGCA
-43 4.5 GGAATGTTTTTCC
Desulfovibrio salexigens DSM 2638 Desal_2938 -180 3.8 GGACTTTTTTTCC
Desulfovibrio vulgaris Hildenborough DVU0307 -27 4.7 GGAATATTCTGCC
Desulfovibrio vulgaris str. Miyazaki F DvMF_1808 -206 4.5 GGCAGGTTCTGCC
-96 4.8 GGAAGAATCTTCC
Lawsonia intracellularis PHE/MN1-00 LI0348 -88 4 GGCAAAAATTTCT
-42 3.9 GGTACATTTTGCC
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