Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of CodY regulog to Staphylococcus haemolyticus JCSC1435

Reference regulog properties
Source regulog: CodY - Staphylococcaceae
Regulator type: Transcription factor
Regulator family: CodY
Regulation mode: repressor
Biological process: Amino acid metabolism
Effector: Branched-chain amino acids
Phylum: Firmicutes
Propagated regulon:
Target genome Staphylococcus haemolyticus JCSC1435
Orthologous TF(s) SH1659
Regulated genes 66
Built upon 516 sites [see more]
Predicted regulatory interactions in Staphylococcus haemolyticus JCSC1435
Locus tag Position Score Sequence
Position: -133
Score: 4.3
Sequence: AAATATCAAAATAAT
Position: -60
Score: 4.8
Sequence: ATTTTTTTAAAAATT
Locus tag: SH0139
SH0139 -133 4.3 AAATATCAAAATAAT
-60 4.8 ATTTTTTTAAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: icaC
Ortholog function: intercellular adhesion protein C
Staphylococcus aureus subsp. aureus N315 SA2462 4 4.4 AATTTTTTAACTTTT
Staphylococcus capitis SK14 STACA0001_0085 4 4.4 AATTTTTTAACTTTT
Position: -81
Score: 4.5
Sequence: AATTTATTGAATATT
Locus tag: SH0145
SH0145 -81 4.5 AATTTATTGAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: brnQ1
Ortholog function: branched-chain amino acid transport system
Staphylococcus aureus subsp. aureus N315 SA0180 -117 5.2 AATTTTCAAAAAATT
Staphylococcus capitis SK14 STACA0001_0024 -81 4.7 TTTTTTCTGAAAATT
Staphylococcus epidermidis ATCC 12228 SE0217 -173 4.4 AATATTAAAAATTTT
Staphylococcus haemolyticus JCSC1435 SH0145 -81 4.5 AATTTATTGAATATT
Macrococcus caseolyticus JCSC5402 MCCL_0050 -86 4.5 AATTTTTTAATTAAT
-77 4.8 ATTAATCAGAAAATT
Position: -76
Score: 4.8
Sequence: AATTTTTAAAAATTT
Locus tag: SH0156
SH0156 -76 4.8 AATTTTTAAAAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA2002
Ortholog function: hypothetical regulator
Staphylococcus aureus subsp. aureus N315 SA2002 -220 5.1 AATTTTTAAAAAATT
Staphylococcus haemolyticus JCSC1435 SH0156 -76 4.8 AATTTTTAAAAATTT
-51 4.2 AAATTTTTAAATTAT
Position: 36
Score: 4.2
Sequence: ATTATTAAAAAAAAT
Locus tag: SH0388
SH0388 36 4.2 ATTATTAAAAAAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: capA
Ortholog function: capsular polysaccharide synthesis enzyme Cap5A
Staphylococcus carnosus subsp. carnosus TM300 Sca_2357 -118 4.1 AATAATTAGAAATTG
-81 4.3 AAAAATTTGAAATTT
Staphylococcus haemolyticus JCSC1435 SH0388 -367 4.6 TATATTTAAAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0060 -125 4.5 CATATTTAAAAAATT
Macrococcus caseolyticus JCSC5402 MCCL_0668 -103 4.2 AATTGTATAAAAAAT
-63 4.3 AAATTATTGAATATT
Position: -69
Score: 4.7
Sequence: ATTATTCTGACAATT
Locus tag: SH0413
SH0413 -69 4.7 ATTATTCTGACAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cysH
Ortholog function: 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase
Staphylococcus capitis SK14 STACA0001_1812 -72 4.7 ATTATTCTGACAATT
Staphylococcus epidermidis ATCC 12228 SE2181 -69 4.7 ATTATTCTGACAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0058 -80 4.6 TATTTTCAGACAATT
Staphylococcus haemolyticus JCSC1435 SH0413 -69 4.7 ATTATTCTGACAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2409 -80 4.5 TATTTTCAAATAATT
Position: -89
Score: 5
Sequence: AATTTTTAAAATATT
Position: -80
Score: 4.8
Sequence: AATATTCTAAATTTT
Locus tag: SH0457
SH0457 -89 5 AATTTTTAAAATATT
-80 4.8 AATATTCTAAATTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA2398
Ortholog function: hypothetical protein
Staphylococcus aureus subsp. aureus N315 SA2398 -109 4.5 TATATTCTGATAATT
-100 4 ATAATTAAGAATTTT
Staphylococcus capitis SK14 STACA0001_0891 -131 4.3 TATTTTCTGAATTAT
-122 4.7 AATTATTAAAATATT
Staphylococcus epidermidis ATCC 12228 SE2150 -125 4.6 TATTTTCTGATAATT
-116 4.6 ATAATTTAGAATATT
Staphylococcus haemolyticus JCSC1435 SH0457 -89 5 AATTTTTAAAATATT
-80 4.8 AATATTCTAAATTTT
Position: -145
Score: 4.6
Sequence: ATTATTCAGAAAATA
Position: -106
Score: 4.5
Sequence: AATATATTGAATATT
Locus tag: SH0459
SH0459 -145 4.6 ATTATTCAGAAAATA
-106 4.5 AATATATTGAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gabT
Ortholog function: 4-aminobutyrate aminotransferase
Staphylococcus aureus subsp. aureus N315 SA2397 -136 4 AAAATTCTTAATTAT
-127 4.5 AATTATCAGAATATA
Staphylococcus capitis SK14 STACA0001_0892 -175 4.7 AATATTTTAATAATT
-166 4.3 ATAATTCAGAAAATA
Staphylococcus epidermidis ATCC 12228 SE2148 -164 4.6 AATATTCTAAATTAT
-155 4.6 AATTATCAGAAAATA
Staphylococcus carnosus subsp. carnosus TM300 Sca_0283 -127 4.8 AAATATCTGAAAATT
Staphylococcus haemolyticus JCSC1435 SH0459 -145 4.6 ATTATTCAGAAAATA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0353 -218 4.6 ATTTTTCAGAATATA
Position: -114
Score: 5.1
Sequence: AATTTTCAGAAATTT
Locus tag: SH0460
SH0460 -114 5.1 AATTTTCAGAAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA2396
Ortholog function: putative amino acid transporter
Staphylococcus aureus subsp. aureus N315 SA2396 -226 4.9 AATTGTTAGAAAATT
-103 4.8 ATTTTTCAGAATTTT
-94 4.2 AATTTTTAGACAAAA
Staphylococcus capitis SK14 STACA0001_0893 -295 4.3 AATTTGTAAAATATT
-160 4.8 ATTTTTCAGAATTTT
-151 4.2 AATTTTTAGACAAAA
Staphylococcus epidermidis ATCC 12228 SE2147 -165 4.8 ATTTTTCAGAATTTT
-156 4.2 AATTTTTAGACAAAA
Staphylococcus haemolyticus JCSC1435 SH0460 -114 5.1 AATTTTCAGAAATTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0274 -98 5.3 AATTTTCTGAATATT
-89 4.3 AATATTTAGATATAT
Position: -156
Score: 5.3
Sequence: AATATTCTGAAAATT
Locus tag: SH0484
SH0484 -156 5.3 AATATTCTGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA2357
Ortholog function: putative regulatory protein
Staphylococcus aureus subsp. aureus N315 SA2357 -188 4.2 CTTTATCTAAAAATT
-179 4.7 AAAATTCAGAATTTT
Staphylococcus capitis SK14 STACA0001_0926 -184 4.6 AATTATCTAAATTTT
-175 4.4 AATTTTCTGAAAACG
Staphylococcus epidermidis ATCC 12228 SE2129 -172 5.1 AATTTTCAGAAAAAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_2043 -282 4.7 CATATTTTGAAAATT
-69 4.5 TATTATCAGAATATT
Staphylococcus haemolyticus JCSC1435 SH0484 -156 5.3 AATATTCTGAAAATT
-147 4.1 AAAATTTAGAATTTG
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0292 -65 5.3 AATATTCTGAAAATT
-56 4.2 AAAATTAAGAAAATA
Position: -253
Score: 4.5
Sequence: ATAAATCTGAAAATT
Position: -244
Score: 4.4
Sequence: AAAATTATAAATATT
Locus tag: SH0492
SH0492 -253 4.5 ATAAATCTGAAAATT
-244 4.4 AAAATTATAAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: mtnE
Ortholog function: transaminase MtnE involved in methionine biosynthesis via salvage pathway
Staphylococcus aureus subsp. aureus N315 SA2347 -205 4.8 ATTAATCTGAAAATT
Staphylococcus capitis SK14 STACA0001_0934 -212 4.2 AAATGTTTGAAAATA
-93 4.6 ACTTATCTGAAAATT
Staphylococcus epidermidis ATCC 12228 SE2122 -61 4.4 TTATTTCAGAAAATT
-52 4.5 AAAATTCTAACTATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0010 -257 4.4 AAATGTCAGAATTTT
Staphylococcus haemolyticus JCSC1435 SH0492 -253 4.5 ATAAATCTGAAAATT
-244 4.4 AAAATTATAAATATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0294 -203 4.3 AATATTCTGATAAAA
Macrococcus caseolyticus JCSC5402 MCCL_0180 -222 4.8 AATATTCTGAATACT
Position: -75
Score: 5.1
Sequence: AAATTTCTGAAAATT
Locus tag: SH0589
SH0589 -75 5.1 AAATTTCTGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA2261
Ortholog function: putative p-aminobenzoyl-glutamate transporter
Staphylococcus aureus subsp. aureus N315 SA2261 -75 4.9 CATTTTCTGAAAATT
Staphylococcus capitis SK14 STACA0001_1021 -78 5.1 AAATTTCAGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_2265 -83 4.8 AATTTTCAGAATTAT
Staphylococcus haemolyticus JCSC1435 SH0589 -75 5.1 AAATTTCTGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0435 -75 4.9 TATTTTCAGAATATT
Position: -209
Score: 5.1
Sequence: AATTTTCAGAAATTT
Locus tag: SH0590
SH0590 -209 5.1 AATTTTCAGAAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA2260
Ortholog function: putative short chain dehydrogenase
Staphylococcus aureus subsp. aureus N315 SA2260 -174 4.9 AATTTTCAGAAAATG
Staphylococcus capitis SK14 STACA0001_1022 -218 5.1 AATTTTCTGAAATTT
Staphylococcus epidermidis ATCC 12228 SE2032 -218 4.6 ATTTTTCTGAAATAT
Staphylococcus haemolyticus JCSC1435 SH0590 -209 5.1 AATTTTCAGAAATTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0436 -165 4.9 AATATTCTGAAAATA
Position: -37
Score: 5
Sequence: AATTATCAGAATATT
Locus tag: SH0593
SH0593 -37 5 AATTATCAGAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cysD
Ortholog function: O-acetylhomoserine sulfhydrylase
Staphylococcus haemolyticus JCSC1435 SH0593 -37 5 AATTATCAGAATATT
-28 4.2 AATATTCTATTAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0251 -41 5.1 AATTATCAGAAAATT
-32 4.2 AAAATTTAGAAATTA
Position: -332
Score: 4.2
Sequence: AAAAGTTTGACAATT
Position: -231
Score: 4.1
Sequence: AATTTTTTTAATCTT
Position: -204
Score: 4.3
Sequence: ATGTTTCAAAAAATT
Position: -134
Score: 4.1
Sequence: ATTAATTAAAATTTT
Locus tag: SH0606
SH0606 -332 4.2 AAAAGTTTGACAATT
-231 4.1 AATTTTTTTAATCTT
-204 4.3 ATGTTTCAAAAAATT
-134 4.1 ATTAATTAAAATTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: opuCA
Ortholog function: glycine betaine/carnitine/choline ABC transporter opuCA
Staphylococcus capitis SK14 STACA0001_1036 -145 4.3 CATATTCAAAATTTT
Staphylococcus epidermidis ATCC 12228 SE2018 -80 4.1 ATTTGTTTAACAATT
Staphylococcus haemolyticus JCSC1435 SH0606 -134 4.1 ATTAATTAAAATTTT
Position: -231
Score: 5.1
Sequence: AATTTTCAGAAATTT
Locus tag: SH0623
SH0623 -231 5.1 AATTTTCAGAAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: aapA
Ortholog function: D-serine/D-alanine/glycine transporter
Staphylococcus aureus subsp. aureus N315 SA2226 -108 4.3 TATATTTAAAAAAAT
Staphylococcus aureus subsp. aureus N315 SA2227 -108 4.3 TATATTTAAAAAAAT
Staphylococcus capitis SK14 STACA0001_1050 -166 4.8 AATTTTTTGATTATT
-157 4.7 ATTATTCTAAAAAAT
Staphylococcus epidermidis ATCC 12228 SE2004 -93 4.9 ATATTTCTGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1918 -126 4.6 AATTTTCTTATAATT
Staphylococcus haemolyticus JCSC1435 SH0623 -231 5.1 AATTTTCAGAAATTT
Position: -189
Score: 5
Sequence: AATTTTCATAAAATT
Locus tag: SH0729
SH0729 -189 5 AATTTTCATAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: metT
Ortholog function: methionine transporter MetT
Staphylococcus epidermidis ATCC 12228 SE1902 -303 4.2 TATTATTAAAATATT
-294 4.7 AATATTTAAAATAAT
Staphylococcus haemolyticus JCSC1435 SH0729 -189 5 AATTTTCATAAAATT
Position: -179
Score: 4.7
Sequence: AATTTTCAAAATTAT
Position: -52
Score: 4.5
Sequence: AATATCCAAAATATT
Locus tag: SH0902
SH0902 -179 4.7 AATTTTCAAAATTAT
-52 4.5 AATATCCAAAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hmrA
Ortholog function: N-acyl-L-amino acid amidohydrolase
Staphylococcus aureus subsp. aureus N315 SA1935 -143 4.5 AGTTATTAGAAAATT
Staphylococcus capitis SK14 STACA0001_0837 -235 4.6 AATTGTAAGAAAATT
Staphylococcus epidermidis ATCC 12228 SE1731 -113 4.6 AATTGTAAGAAAATT
-102 4.2 AATTGTGTAAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1636 -176 4.1 AATTTATTAAATTTT
Staphylococcus haemolyticus JCSC1435 SH0902 -179 4.7 AATTTTCAAAATTAT
-52 4.5 AATATCCAAAATATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0752 -190 4.1 TATTTTTATAAATTT
-181 4.6 AAATTTCAGAAAATG
Position: -54
Score: 4.9
Sequence: AATTTTAAGAATATT
Position: -45
Score: 5.1
Sequence: AATATTCTAAATATT
Locus tag: SH0977
SH0977 -54 4.9 AATTTTAAGAATATT
-45 5.1 AATATTCTAAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ilvC
Ortholog function: alpha-keto-beta-hydroxylacil reductoisomerase
Staphylococcus aureus subsp. aureus N315 SA1861 -301 4.9 AATTTTTAGACAATT
-53 4.5 ATATTTCAGAATTTT
Staphylococcus capitis SK14 STACA0001_0523 -49 5.2 AATATTTTGAAAATT
-40 4.3 AAAATTAAGAATTTT
Staphylococcus epidermidis ATCC 12228 SE1657 -50 4.9 ATTATTTTGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1562 -52 4.8 AAAATTCTAAATATT
Staphylococcus haemolyticus JCSC1435 SH0977 -54 4.9 AATTTTAAGAATATT
-45 5.1 AATATTCTAAATATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0822 -323 4.2 AATTGACAGAAAAAT
-266 4 ATTTATCAAATTTTT
-258 4.7 AATTTTTAGATATTT
-249 4.1 ATATTTCAAACAAAT
Macrococcus caseolyticus JCSC5402 MCCL_0858 -266 5.2 AATTTTTAGAAAATT
-257 4.7 AAAATTTTAAATATT
Position: -321
Score: 4.4
Sequence: AGTTGTTAGAAAATT
Position: -254
Score: 4.7
Sequence: AATTTTTAAACAATT
Locus tag: SH0980
SH0980 -321 4.4 AGTTGTTAGAAAATT
-254 4.7 AATTTTTAAACAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ilvD
Ortholog function: dihydroxy-acid dehydratase
Staphylococcus aureus subsp. aureus N315 SA1858 -301 4.9 AATTTTTAGACAATT
-53 4.5 ATATTTCAGAATTTT
Staphylococcus capitis SK14 STACA0001_0526 -327 4.9 AATTGTTAGAAAATT
Staphylococcus epidermidis ATCC 12228 SE1654 -330 5.2 AATTTTTAGAAAATT
-321 4.1 AAAATTCTAAATTTA
Staphylococcus carnosus subsp. carnosus TM300 Sca_1559 -316 4.8 AATTTTAAAAAAATT
-307 4.3 AAAATTCTAATAAAT
Staphylococcus haemolyticus JCSC1435 SH0980 -321 4.4 AGTTGTTAGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0825 -323 4.2 AATTGACAGAAAAAT
-266 4 ATTTATCAAATTTTT
-258 4.7 AATTTTTAGATATTT
-249 4.1 ATATTTCAAACAAAT
Macrococcus caseolyticus JCSC5402 MCCL_0860 -266 5.2 AATTTTTAGAAAATT
-257 4.7 AAAATTTTAAATATT
Position: -124
Score: 4.1
Sequence: ATATGTTAAAATATT
Locus tag: SH0996
SH0996 -124 4.1 ATATGTTAAAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: agrB
Ortholog function: accessory gene regulator B
Staphylococcus aureus subsp. aureus N315 SA1842 -261 4.6 AAAATTCTTAAAATT
Staphylococcus haemolyticus JCSC1435 SH0996 -124 4.1 ATATGTTAAAATATT
Position: -72
Score: 4
Sequence: CTTTTTTAAAATTTT
Locus tag: SH1104
SH1104 -72 4 CTTTTTTAAAATTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: artQ
Ortholog function: Arginine ABC transport system ArtQ
Staphylococcus aureus subsp. aureus N315 SA1675 -167 4.3 ATAATTATGAATATT
Staphylococcus capitis SK14 STACA0001_0720 6 4.2 AAAATTATTAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1432 -83 5.1 AAATTTCAGAAAATT
-74 4 AAAATTTAAAAATTA
Staphylococcus haemolyticus JCSC1435 SH1104 -72 4 CTTTTTTAAAATTTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0937 -63 4.2 ATTATATTGAATATT
Macrococcus caseolyticus JCSC5402 MCCL_1584 -87 4.3 AATTATTAGAACATT
Position: -92
Score: 4.9
Sequence: AATTTTTAGATAATT
Locus tag: SH1188
SH1188 -92 4.9 AATTTTTAGATAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: acuA
Ortholog function: hypothetical protein
Staphylococcus aureus subsp. aureus N315 SA1555 -114 4.1 ACATTTCTAATTATT
-105 4.6 ATTATTCAAAATTTT
-56 4.3 AATTTTCTATATAAT
Staphylococcus capitis SK14 STACA0001_0627 -110 4.3 ATTTTTCAAAAATCT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1339 -159 4.1 ATAATTATGATAATT
-150 4.2 ATAATTCTGATTTTT
Staphylococcus haemolyticus JCSC1435 SH1188 -92 4.9 AATTTTTAGATAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1029 -119 4.9 AATTTTCAAAATAAT
Macrococcus caseolyticus JCSC5402 MCCL_1410 -39 4.5 ATTTTTCAAAATATA
Position: -87
Score: 4.9
Sequence: AATTATCTAAAAATT
Locus tag: SH1189
SH1189 -87 4.9 AATTATCTAAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: acsA
Ortholog function: acetyl-CoA synthetase
Staphylococcus aureus subsp. aureus N315 SA1554 -78 4.6 AAAATTTTGAATAAT
-69 4.1 AATAATTAGAAATGT
Staphylococcus capitis SK14 STACA0001_0626 -78 4.3 AGATTTTTGAAAAAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1338 -96 4.2 AAAAATCAGAATTAT
-87 4.1 AATTATCATAATTAT
Staphylococcus haemolyticus JCSC1435 SH1189 -87 4.9 AATTATCTAAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1030 -75 4.9 ATTATTTTGAAAATT
Macrococcus caseolyticus JCSC5402 MCCL_1409 -48 4.5 TATATTTTGAAAAAT
Position: -55
Score: 5
Sequence: AATTATCAGAATATT
Locus tag: SH1201
SH1201 -55 5 AATTATCAGAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA1544
Ortholog function: putative phosphoserine transaminase
Staphylococcus aureus subsp. aureus N315 SA1544 -54 5.4 AATTTTCAGAAAATT
Staphylococcus capitis SK14 STACA0001_0615 -53 5.2 AATATTCAGAATATT
Staphylococcus epidermidis ATCC 12228 SE1400 -54 5 AATATTCAGAATTTT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1329 -55 4.9 TATTTTCAGAATATT
Staphylococcus haemolyticus JCSC1435 SH1201 -55 5 AATTATCAGAATATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1040 -55 4.9 TATTTTCTGAAAATT
Position: -248
Score: 4.3
Sequence: AATTATTTAAAAATA
Locus tag: SH1363
SH1363 -248 4.3 AATTATTTAAAAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: sodA
Ortholog function: superoxide dismutase SodA
Staphylococcus aureus subsp. aureus N315 SA1382 -140 4.1 AAATGTTTAATTATT
Staphylococcus capitis SK14 STACA0001_1791 -219 4.3 TATTTTCAAAAAACT
-184 4.2 AATGGTCTGAAAAAT
Staphylococcus epidermidis ATCC 12228 SE1240 -101 4.4 AATAATTTAATAATT
Staphylococcus haemolyticus JCSC1435 SH1363 -248 4.3 AATTATTTAAAAATA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1203 -182 4.2 AATTTTTAAAATTGT
Position: -66
Score: 4.3
Sequence: AAAATTTTGATAAAT
Locus tag: SH1382
SH1382 -66 4.3 AAAATTTTGATAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA1364
Ortholog function: putative sulfurtransferase
Staphylococcus aureus subsp. aureus N315 SA1364 -66 4.8 AATATTTTGATAATT
Staphylococcus capitis SK14 STACA0001_1771 -66 4.6 AATATTTTGATAAAT
Staphylococcus epidermidis ATCC 12228 SE1218 -66 4.6 AATATTTTGATAAAT
Staphylococcus haemolyticus JCSC1435 SH1382 -66 4.3 AAAATTTTGATAAAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1221 -67 4.6 AATATTTTGATAAAT
Position: -100
Score: 4.3
Sequence: ATTTATCAAAATTTT
Locus tag: SH1383
SH1383 -100 4.3 ATTTATCAAAATTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA1363
Ortholog function: Lipoate-protein ligase A
Staphylococcus aureus subsp. aureus N315 SA1363 -106 4.8 AATTATCAAAATATT
Staphylococcus capitis SK14 STACA0001_1770 -109 4.6 ATTTATCAAAATATT
Staphylococcus epidermidis ATCC 12228 SE1217 -108 4.6 ATTTATCAAAATATT
Staphylococcus haemolyticus JCSC1435 SH1383 -100 4.3 ATTTATCAAAATTTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1222 -121 4.6 ATTTATCAAAATATT
Position: -162
Score: 4.1
Sequence: TTTAATTTGAATATT
Position: -124
Score: 4.7
Sequence: AATTATTAAAATATT
Position: -115
Score: 4.6
Sequence: AATATTCTAATAAAT
Locus tag: SH1446
SH1446 -162 4.1 TTTAATTTGAATATT
-124 4.7 AATTATTAAAATATT
-115 4.6 AATATTCTAATAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: aroC
Ortholog function: chorismate synthase
Staphylococcus aureus subsp. aureus N315 SA1299 -150 4.6 AATATTAAGATAATT
-141 4.2 ATAATTCTGACATTT
Staphylococcus epidermidis ATCC 12228 SE1155 -138 4 TCTTTTTTAAATATT
Staphylococcus haemolyticus JCSC1435 SH1446 -124 4.7 AATTATTAAAATATT
-115 4.6 AATATTCTAATAAAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1278 -113 4.6 ATTTTTATGAATATT
Position: -87
Score: 4.2
Sequence: AATTTTCTGAAATCA
Locus tag: SH1502
SH1502 -87 4.2 AATTTTCTGAAATCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: braB
Ortholog function: branched-chain amino acid transport system
Staphylococcus capitis SK14 STACA0001_1652 -85 4.7 AATTTTCTGAAATTA
Staphylococcus epidermidis ATCC 12228 SE1090 -87 5.1 AATTTTCTGAAATTT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1051 -96 4.7 AATTTTCAGAAAGTT
Staphylococcus haemolyticus JCSC1435 SH1502 -87 4.2 AATTTTCTGAAATCA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1343 -95 4.5 ATATTTTTAAATATT
-86 5 AATATTCTGAAATTT
Macrococcus caseolyticus JCSC5402 MCCL_1059 -84 4.9 AATATTCAGAAAATA
Position: -161
Score: 4.4
Sequence: AGTATTTAGAATTTT
Locus tag: SH1513
SH1513 -161 4.4 AGTATTTAGAATTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ykuR
Ortholog function: hippurate hydrolase
Staphylococcus aureus subsp. aureus N315 SA1230 -45 5.2 AATATTCTAAAAATT
Staphylococcus capitis SK14 STACA0001_1644 -44 5 AATTTTCTTAAAATT
Staphylococcus epidermidis ATCC 12228 SE1078 -46 5.2 AATTTTCTAAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1042 -340 4.3 AAATTTCTAAAAATC
Staphylococcus haemolyticus JCSC1435 SH1513 -161 4.4 AGTATTTAGAATTTT
Position: 27
Score: 4.2
Sequence: ATTATTCAATATATT
Locus tag: SH1514
SH1514 27 4.2 ATTATTCAATATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: dapD
Ortholog function: tetrahydrodipicolinate acetyltransferase
Staphylococcus aureus subsp. aureus N315 SA1229 -45 5.2 AATATTCTAAAAATT
Staphylococcus capitis SK14 STACA0001_1643 -44 5 AATTTTCTTAAAATT
Staphylococcus epidermidis ATCC 12228 SE1077 -46 5.2 AATTTTCTAAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1041 -340 4.3 AAATTTCTAAAAATC
Staphylococcus haemolyticus JCSC1435 SH1514 -42 4.8 AATTTTTTTAAAATT
-33 4.3 AAAATTCAAACAAAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1353 -350 4.5 ATTTTTCAGTAAATT
-341 4.3 TAAATTTAAAAAATT
Position: -42
Score: 4.8
Sequence: AATTTTTTTAAAATT
Position: -33
Score: 4.3
Sequence: AAAATTCAAACAAAT
Locus tag: SH1517
SH1517 -42 4.8 AATTTTTTTAAAATT
-33 4.3 AAAATTCAAACAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: asd
Ortholog function: aspartate semialdehyde dehydrogenase
Staphylococcus aureus subsp. aureus N315 SA1226 -45 5.2 AATATTCTAAAAATT
Staphylococcus capitis SK14 STACA0001_1640 -44 5 AATTTTCTTAAAATT
Staphylococcus epidermidis ATCC 12228 SE1074 -46 5.2 AATTTTCTAAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1038 -340 4.3 AAATTTCTAAAAATC
Staphylococcus haemolyticus JCSC1435 SH1517 -42 4.8 AATTTTTTTAAAATT
-33 4.3 AAAATTCAAACAAAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1356 -350 4.5 ATTTTTCAGTAAATT
-341 4.3 TAAATTTAAAAAATT
Position: -102
Score: 4.8
Sequence: AATATTTTGATTATT
Position: -93
Score: 4.4
Sequence: ATTATTCGGAATATT
Locus tag: SH1542
SH1542 -102 4.8 AATATTTTGATTATT
-93 4.4 ATTATTCGGAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: trpE
Ortholog function: anthranilate synthase component I
Staphylococcus aureus subsp. aureus N315 SA1199 -439 4.5 AATAATTAGAATTTT
Staphylococcus capitis SK14 STACA0001_1613 -438 4.6 AATAATTAGAAAAAT
-429 4.4 AAAAATCAGATAATT
Staphylococcus epidermidis ATCC 12228 SE1048 -431 4.6 AATAATTAGAAAAAT
-422 4.4 AAAAATCAGATAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1012 -464 4.3 CATTATTAAAAAATT
Staphylococcus haemolyticus JCSC1435 SH1542 -453 4.3 AAATATCAAACAATT
Position: -35
Score: 4.8
Sequence: CATATTCTGAAAATT
Locus tag: SH1544
SH1544 -35 4.8 CATATTCTGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: tyrA
Ortholog function: prephenate dehydrogenase
Staphylococcus aureus subsp. aureus N315 SA1197 -34 5.1 ATTATTCTGAAAATT
Staphylococcus capitis SK14 STACA0001_1611 -35 4.8 ACTATTCTGAAAATT
Staphylococcus epidermidis ATCC 12228 SE1047 -251 4.4 AATTATCTGATTTTT
-242 4.6 ATTTTTCTAATTATT
-35 4.4 GTTATTCTGAAAATT
Staphylococcus haemolyticus JCSC1435 SH1544 -35 4.8 CATATTCTGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1387 -36 4.8 ACTATTCTGAAAATT
Position: -123
Score: 4.4
Sequence: AAAATTTTAAATTTT
Position: -114
Score: 5.1
Sequence: AATTTTCTGAAATTT
Locus tag: SH1573
SH1573 -123 4.4 AAAATTTTAAATTTT
-114 5.1 AATTTTCTGAAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: katA
Ortholog function: catalase
Staphylococcus aureus subsp. aureus N315 SA1170 -111 4.1 AAAAATTAAAATTTT
-102 4.7 AATTTTCTGATTTTT
Staphylococcus capitis SK14 STACA0001_1577 -131 4.7 AATATTTAAAAATTT
-121 5.1 AATTTTCTGAAATTT
Staphylococcus epidermidis ATCC 12228 SE1016 -142 4.1 AATTGTTAAATTTTT
-133 4.6 ATTTTTCTGATATTT
Staphylococcus carnosus subsp. carnosus TM300 Sca_2336 -28 4.1 ATTATTCTAAATAAG
Staphylococcus haemolyticus JCSC1435 SH1573 -123 4.4 AAAATTTTAAATTTT
-114 5.1 AATTTTCTGAAATTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1432 -129 4.4 AAATGTTTAAATATT
Position: -114
Score: 5.1
Sequence: AAATTTCAGAAAATT
Position: -105
Score: 4.4
Sequence: AAAATTTAAAATTTT
Locus tag: SH1574
SH1574 -114 5.1 AAATTTCAGAAAATT
-105 4.4 AAAATTTAAAATTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: rocC
Ortholog function: amino acid permease
Staphylococcus aureus subsp. aureus N315 SA1169 -110 4.7 AAAAATCAGAAAATT
-101 4.1 AAAATTTTAATTTTT
Staphylococcus capitis SK14 STACA0001_1576 -112 5.1 AAATTTCAGAAAATT
-102 4.7 AAATTTTTAAATATT
Staphylococcus epidermidis ATCC 12228 SE1015 -112 4.6 AAATATCAGAAAAAT
-103 4.1 AAAAATTTAACAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0975 -121 4.3 TTTTTTCAGAATTTT
-112 4.7 AATTTTTTAAATTTT
Staphylococcus haemolyticus JCSC1435 SH1574 -114 5.1 AAATTTCAGAAAATT
-105 4.4 AAAATTTAAAATTTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1433 -111 4.4 AATATTTAAACATTT
Macrococcus caseolyticus JCSC5402 MCCL_0990 -56 4.4 AATTTTCTTAATTAT
Position: -178
Score: 4.7
Sequence: AAAAATCAGAAAATT
Locus tag: SH1579
SH1579 -178 4.7 AAAAATCAGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hom
Ortholog function: homoserine dehydrogenase
Staphylococcus aureus subsp. aureus N315 SA1164 -170 4.7 AAAAATCAGAAAATT
-118 4.6 TATATTTTGAATATT
Staphylococcus capitis SK14 STACA0001_1571 -170 4.7 AAAAATCAGAAAATT
-91 4.3 AAAATTAAGAATAAT
Staphylococcus epidermidis ATCC 12228 SE1009 -170 4.7 AAAAATCAGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0970 -127 4.2 AAATTTCAACATATT
-109 4.4 AATTTTTTGAACTTT
Staphylococcus haemolyticus JCSC1435 SH1579 -178 4.7 AAAAATCAGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1438 -168 4.7 AAAAATCAGAAAATT
Position: -35
Score: 4.7
Sequence: AATTTTCTGATTTTT
Locus tag: SH1580
SH1580 -35 4.7 AATTTTCTGATTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: thrA
Ortholog function: aspartokinase III
Staphylococcus aureus subsp. aureus N315 SA1163 -87 4.6 AATATTCAAAATATA
-35 4.7 AATTTTCTGATTTTT
Staphylococcus capitis SK14 STACA0001_1570 -33 4.7 AATTTTCTGATTTTT
Staphylococcus epidermidis ATCC 12228 SE1008 -33 4.7 AATTTTCTGATTTTT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0969 -97 4.4 AAAGTTCAAAAAATT
-79 4.2 AATATGTTGAAATTT
Staphylococcus haemolyticus JCSC1435 SH1580 -35 4.7 AATTTTCTGATTTTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1439 -35 4.7 AATTTTCTGATTTTT
Position: -185
Score: 5.1
Sequence: ATTATTCTGAAAATT
Locus tag: SH1591
SH1591 -185 5.1 ATTATTCTGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SAS040
Ortholog function: hypothetical protein
Staphylococcus capitis SK14 STACA0001_1559 -178 4.7 ATAATTCTGAATATT
Staphylococcus epidermidis ATCC 12228 SE0996 -179 5 AAATTTCTGAATATT
Staphylococcus haemolyticus JCSC1435 SH1591 -194 4.3 AATAATTTAATTATT
-185 5.1 ATTATTCTGAAAATT
-123 4.5 AATATTTTAAATATA
Position: -42
Score: 5.1
Sequence: AATTTTCAGAATAAT
Locus tag: SH1592
SH1592 -42 5.1 AATTTTCAGAATAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ltaE
Ortholog function: low specificity L-threonine aldolase
Staphylococcus haemolyticus JCSC1435 SH1592 -104 4.5 TATATTTAAAATATT
-42 5.1 AATTTTCAGAATAAT
-33 4.3 AATAATTAAATTATT
Position: -41
Score: 4.5
Sequence: ATTAGTTAGAATATT
Locus tag: SH1838
SH1838 -41 4.5 ATTAGTTAGAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pycA
Ortholog function: pyruvate carboxylase
Staphylococcus aureus subsp. aureus N315 SA0963 -41 4.6 ATTAGTTAGAAAATT
Staphylococcus capitis SK14 STACA0001_2249 -42 4.6 ATTAGTTAGAAAATT
-33 4.4 AAAATTCAAAAAATA
Staphylococcus epidermidis ATCC 12228 SE0813 -40 4.1 TATTATCTAATTATT
-31 4.9 ATTATTTAGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0740 -34 4.6 AAAATTCAAATAATT
Staphylococcus haemolyticus JCSC1435 SH1838 -41 4.5 ATTAGTTAGAATATT
-32 4 AATATTCAAACTTTA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1675 -38 4.7 ACTTTTTAGAAAATT
-29 4.1 AAAATTCAAAATTTA
Position: -65
Score: 4.9
Sequence: ATTATTCTAAAAATT
Locus tag: SH1916
SH1916 -65 4.9 ATTATTCTAAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: patA
Ortholog function: putative aminotransferase A
Staphylococcus aureus subsp. aureus N315 SA0902 -50 4.2 TAATTTCTAAATTTT
-41 4.4 AATTTTTAGACAATA
Staphylococcus capitis SK14 STACA0001_2317 -58 4.1 ACTATTTTAACAATT
Staphylococcus epidermidis ATCC 12228 SE0747 -59 4.1 ACTATTTAAACAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0656 -108 4.2 TTTATTCTAAAATTT
Staphylococcus haemolyticus JCSC1435 SH1916 -65 4.9 ATTATTCTAAAAATT
Macrococcus caseolyticus JCSC5402 MCCL_1585 -86 4.3 AATGTTCTAATAATT
Position: -80
Score: 4.6
Sequence: AAAAGTCAGAATATT
Locus tag: SH1925
SH1925 -80 4.6 AAAAGTCAGAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA0883
Ortholog function: hypothetical protein
Staphylococcus aureus subsp. aureus N315 SA0883 -77 4.9 AATAGTCAGAATATT
Staphylococcus capitis SK14 STACA0001_0107 -83 4.7 AAATGTCAGAATATT
Staphylococcus epidermidis ATCC 12228 SE0729 -82 4.7 AAATGTCAGAATATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0643 -178 4.2 AATTATAAAAATAAT
-91 4.1 TATTTTTTAAAAAGT
-82 4.6 AAAAGTCAGAATATT
Staphylococcus haemolyticus JCSC1435 SH1925 -80 4.6 AAAAGTCAGAATATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1756 -174 4.5 AATTTTTATAAATTT
-80 4.6 AAAAGTCTGAATATT
Position: -148
Score: 4.6
Sequence: AATATTCTGACTTTT
Locus tag: SH1926
SH1926 -148 4.6 AATATTCTGACTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: comK
Ortholog function: competence transcription factor
Staphylococcus aureus subsp. aureus N315 SA0882 -147 4.9 AATATTCTGACTATT
Staphylococcus capitis SK14 STACA0001_0106 -151 4.7 AATATTCTGACATTT
Staphylococcus epidermidis ATCC 12228 SE0731 -147 4.7 AATATTCTGACATTT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0642 -145 4.6 AATATTCTGACTTTT
-136 4.1 ACTTTTTAAAAAATA
Staphylococcus haemolyticus JCSC1435 SH1926 -148 4.6 AATATTCTGACTTTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1755 -186 4.6 AATATTCAGACTTTT
-92 4.5 AAATTTATAAAAATT
Macrococcus caseolyticus JCSC5402 MCCL_1546 -195 4.8 ATAATTCTGAAAATT
-186 4.4 AAAATTTAAATTATT
-86 4.7 AAATTTCTTAAAATT
Position: -116
Score: 4.7
Sequence: AATTTTGTGAAAATT
Position: -60
Score: 4.9
Sequence: ATATTTCTGAAAATT
Locus tag: SH1970
SH1970 -116 4.7 AATTTTGTGAAAATT
-60 4.9 ATATTTCTGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: oppB
Ortholog function: oligopeptide ABC transporter permease protein OppB
Staphylococcus aureus subsp. aureus N315 SA0845 -66 4.7 AGATTTCAGAAAATT
Staphylococcus capitis SK14 STACA0001_0146 -36 4.2 AATATACATAATATT
-27 4.6 AATATTCTGAAAAAA
Staphylococcus epidermidis ATCC 12228 SE0680 -63 4.9 ATATTTCTGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0588 -113 5.2 AATATTCTAAAAATT
-65 4.2 AATATTAAAATATTT
-56 4.9 ATATTTCTGAAAATT
Staphylococcus haemolyticus JCSC1435 SH1970 -116 4.7 AATTTTGTGAAAATT
-60 4.9 ATATTTCTGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1794 -56 4.8 ATATTTCTGAATATT
Macrococcus caseolyticus JCSC5402 MCCL_0605 -186 4.8 AATTTTTAAAAAAAT
-132 4.8 AATCTTCTGAAAATT
Position: -31
Score: 5.1
Sequence: AATTTTCAGAAAAAT
Locus tag: SH1989
SH1989 -31 5.1 AATTTTCAGAAAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: argG
Ortholog function: argininosuccinate synthase
Staphylococcus aureus subsp. aureus N315 SA0822 -32 4.6 AATATTCAGATAACT
Staphylococcus capitis SK14 STACA0001_0165 -33 5 AAAATTCTGAAAATT
Staphylococcus epidermidis ATCC 12228 SE0657 -180 4.5 AATTTACAGAAATTT
-171 4.3 AAATTTTAAAATATA
Staphylococcus carnosus subsp. carnosus TM300 Sca_0569 -33 4.5 AAAATTCTAACTATT
Staphylococcus haemolyticus JCSC1435 SH1989 -31 5.1 AATTTTCAGAAAAAT
Position: -114
Score: 4.3
Sequence: ACTTTTTAAAAATTT
Position: -60
Score: 4.4
Sequence: TATATTCTAAATTTT
Position: -51
Score: 4.3
Sequence: AATTTTCAGATTTTA
Locus tag: SH2058
SH2058 -114 4.3 ACTTTTTAAAAATTT
-60 4.4 TATATTCTAAATTTT
-51 4.3 AATTTTCAGATTTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: lysE
Ortholog function: lysine exporter protein
Staphylococcus aureus subsp. aureus N315 SA0753 -41 4.6 TTTTTTCAGAATATT
Staphylococcus capitis SK14 STACA0001_0229 -43 4.7 AATTATCAGAATTTT
Staphylococcus haemolyticus JCSC1435 SH2058 -60 4.4 TATATTCTAAATTTT
-51 4.3 AATTTTCAGATTTTA
Position: -102
Score: 5
Sequence: AAATTTCTAAAAATT
Locus tag: SH2166
SH2166 -102 5 AAATTTCTAAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: tppB
Ortholog function: di-tripepride ABC transporter
Staphylococcus aureus subsp. aureus N315 SA0682 -112 4.6 AATATTCTCAATATT
-103 4.1 AATATTTTTATTTTT
Staphylococcus capitis SK14 STACA0001_0301 -124 4.3 AATTGACTGAATATT
-115 4.5 AATATTCATATTATT
-98 4.8 TATTTTTTGAAAATT
Staphylococcus epidermidis ATCC 12228 SE0509 -107 4 CTTTTTTTAAATTTT
-98 5.2 AATTTTTTGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0374 -114 5.3 AATATTCTGAAAATT
-88 4.5 TATTTTAAGAAAATT
Staphylococcus haemolyticus JCSC1435 SH2166 -102 5 AAATTTCTAAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1991 -118 4.1 AAATAACAGAATATT
-109 4.6 AATATTCTCAATATT
Macrococcus caseolyticus JCSC5402 MCCL_0478 -117 4.6 AACTTTTTGAAAATT
-36 5.3 AATTTTCAGAATATT
Position: -191
Score: 4.6
Sequence: AATTTTCAGATAATA
Locus tag: SH2222
SH2222 -191 4.6 AATTTTCAGATAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA0626
Ortholog function: hypothetical protein
Staphylococcus aureus subsp. aureus N315 SA0626 -195 4.5 ATATTTTTGAAAAAT
Staphylococcus capitis SK14 STACA0001_0358 -200 4.6 ATTAATTAGAAAATT
-142 4.3 AATTTTAAGTAAATT
-98 4.2 ATAATTTTGAAAATA
Staphylococcus haemolyticus JCSC1435 SH2222 -200 4.1 TTTATTTAGAATTTT
-191 4.6 AATTTTCAGATAATA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2051 -190 5.1 AATTTTCAGAAAAAT
Position: -45
Score: 4.6
Sequence: TATTATCTGAAAATT
Locus tag: SH2223
SH2223 -45 4.6 TATTATCTGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yxjH
Ortholog function: putative methionine synthase II
Staphylococcus haemolyticus JCSC1435 SH2223 -45 4.6 TATTATCTGAAAATT
-36 4.1 AAAATTCTAAATAAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2052 -38 5.1 ATTTTTCTGAAAATT
Position: -172
Score: 5
Sequence: AAAATTCAGAAAATT
Locus tag: SH2248
SH2248 -172 5 AAAATTCAGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA0601
Ortholog function: hypothetical protein
Staphylococcus aureus subsp. aureus N315 SA0601 -400 5 AAAATTCAGAATATT
-391 4.1 AATATTTTTAATTAT
Staphylococcus capitis SK14 STACA0001_0382 -211 5 AAAATTCAGAATATT
Staphylococcus epidermidis ATCC 12228 SE0420 -206 5 AAAATTCAGAATATT
-197 4.1 AATATTTAAATTTAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0294 -120 4.8 AATTTTCAGAATTAT
Staphylococcus haemolyticus JCSC1435 SH2248 -172 5 AAAATTCAGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2074 -166 4.8 AAATTTCAGAATTTT
Position: -248
Score: 4.5
Sequence: AATTTTTTAACATTT
Locus tag: SH2406
SH2406 -248 4.5 AATTTTTTAACATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SE0357
Ortholog function: hypothetical protein
Staphylococcus capitis SK14 STACA0001_0445 -33 4.4 TAAATTCAAAATATT
-24 5 AATATTTTAAAAATT
Staphylococcus epidermidis ATCC 12228 SE0357 -139 4.8 AATTTTAAAAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0240 -61 5 AATTTTCAAAAAAAT
Staphylococcus haemolyticus JCSC1435 SH2406 -248 4.5 AATTTTTTAACATTT
Position: -91
Score: 5.2
Sequence: AATTTTTAGAAAATT
Locus tag: SH2449
SH2449 -91 5.2 AATTTTTAGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ilvE
Ortholog function: branched-chain amino acid aminotransferase
Staphylococcus aureus subsp. aureus N315 SA0512 -92 5.2 AATTTTTAGAAAATT
Staphylococcus capitis SK14 STACA0001_0476 -101 4.4 TTTATTTTGAATATT
-92 4.7 AATATTTAGAAAACT
Staphylococcus epidermidis ATCC 12228 SE0318 -99 4.1 TCTATTTTGAATATT
-90 5.2 AATATTTAGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0215 -101 4.5 ATTTTTTTAAATTTT
-92 4.8 AATTTTCTAAAAACT
Staphylococcus haemolyticus JCSC1435 SH2449 -91 5.2 AATTTTTAGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2163 -86 5.2 AATTTTTTGAAAATT
Macrococcus caseolyticus JCSC5402 MCCL_1855 -85 4.8 AATTTTCTAAAAACT
Position: -114
Score: 4.7
Sequence: CATATTTTGAAAATT
Locus tag: SH2512
SH2512 -114 4.7 CATATTTTGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: capH
Ortholog function: capsular polysaccharide synthesis enzyme Cap5H
Staphylococcus aureus subsp. aureus N315 SA0151 -32 4.1 ATTTTAATGAAAATT
Position: -34
Score: 5.4
Sequence: AATTTTCTGAAAATT
Locus tag: SH2540
SH2540 -34 5.4 AATTTTCTGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gltB
Ortholog function: glutamate synthase large subunit
Staphylococcus aureus subsp. aureus N315 SA0430 -35 4.3 TAATATCAGAATATT
-26 4.4 AATATTCTAAAAAAG
Staphylococcus capitis SK14 STACA0001_1494 -174 4.6 AAAATTCTAAAATTT
-36 5 AATTGTCAGAAAATT
Staphylococcus epidermidis ATCC 12228 SE2312 -35 5 AATTGTCAGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0105 -117 4.5 AATAATTAGAATAAT
-43 4.7 AAAAATCTGAAAATT
Staphylococcus haemolyticus JCSC1435 SH2540 -34 5.4 AATTTTCTGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2284 -34 5 AATTTTCAGAATTTT
Position: -138
Score: 5.4
Sequence: AATTTTCAGAAAATT
Locus tag: SH2541
SH2541 -138 5.4 AATTTTCAGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gltC
Ortholog function: transcription activator of glutamate synthase operon
Staphylococcus aureus subsp. aureus N315 SA0429 -169 4.4 CTTTTTTAGAATATT
-160 4.3 AATATTCTGATATTA
Staphylococcus capitis SK14 STACA0001_1493 -179 5 AATTTTCTGACAATT
-41 4.6 AAATTTTAGAATTTT
Staphylococcus epidermidis ATCC 12228 SE2313 -171 5 AATTTTCTGACAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0104 -113 4.7 AATTTTCAGATTTTT
-39 4.5 ATTATTCTAATTATT
Staphylococcus haemolyticus JCSC1435 SH2541 -138 5.4 AATTTTCAGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2285 -118 5 AAAATTCTGAAAATT
Position: -144
Score: 4.8
Sequence: AAATATCTGAAAATT
Locus tag: SH2590
SH2590 -144 4.8 AAATATCTGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA0367
Ortholog function: putative NADPH-flavin oxidoreductase
Staphylococcus aureus subsp. aureus N315 SA0367 -121 4.2 AATATTTTTAAAAGT
Staphylococcus capitis SK14 STACA0001_1449 -145 4.8 AAATATCTGAAAATT
Staphylococcus epidermidis ATCC 12228 SE2355 -114 5.1 AATTATCTGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0041 -140 4.3 AATATTTATATTATT
Staphylococcus haemolyticus JCSC1435 SH2590 -144 4.8 AAATATCTGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2331 -193 4.3 AATAATTTAACTATT
Position: -28
Score: 4.8
Sequence: AATTTTCAGATATTT
Locus tag: SH2591
SH2591 -28 4.8 AATTTTCAGATATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SE2356
Ortholog function: 2-oxo-hepta-3-ene-1,7-dioate hydratase
Staphylococcus capitis SK14 STACA0001_1448 -29 4.8 AATTTTCAGATATTT
Staphylococcus epidermidis ATCC 12228 SE2356 -32 5.1 AATTTTCAGATAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0040 -34 4.3 AATAATATAAATATT
Staphylococcus haemolyticus JCSC1435 SH2591 -28 4.8 AATTTTCAGATATTT
Position: -279
Score: 4.9
Sequence: ACTTTTCTGAAAATT
Locus tag: SH2634
SH2634 -279 4.9 ACTTTTCTGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA0348
Ortholog function: putative transcriptional regulator
Staphylococcus aureus subsp. aureus N315 SA0348 -176 5.1 ATTATTCAGAAAATT
Staphylococcus capitis SK14 STACA0001_1417 -209 4.9 ACTTTTCTGAAAATT
-75 4.8 AATTTTTAAAATAAT
Staphylococcus epidermidis ATCC 12228 SE2378 -210 5.1 ATTTTTCTGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0015 -192 5.1 AATTTTCAGAATAAT
-115 4.9 AATTTTTTGAATTTT
Staphylococcus haemolyticus JCSC1435 SH2634 -279 4.9 ACTTTTCTGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2412 -127 4.6 ACTTATCTGAAAATT
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