Propagation of CodY regulog to Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305
| Source regulog: | CodY - Staphylococcaceae |
| Regulator type: | Transcription factor |
| Regulator family: | CodY |
| Regulation mode: | repressor |
| Biological process: | Amino acid metabolism |
| Effector: | Branched-chain amino acids |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 |
| Orthologous TF(s) | SSP1513 |
| Regulated genes | 64 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -230
Score: 4.8 Sequence: AATAATTAGAAAATT
Locus tag: SSP0012
|
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| SSP0012 | -230 | 4.8 | AATAATTAGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: metX | ||||
| Ortholog function: homoserine-o-acetyltransferase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0011 | -293 | 4.6 | AGTAATCAGAAAATT |
| Staphylococcus capitis SK14 | STACA0001_1363 | -236 | 4.6 | ATTAATTAGAAAATT |
| -227 | 4.6 | AAAATTCAGACTATT | ||
| Staphylococcus epidermidis ATCC 12228 | SE0011 | -233 | 4.8 | AATAATTAGAAAATT |
| -224 | 4.5 | AAAATTTAGACTATT | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0012 | -230 | 4.8 | AATAATTAGAAAATT |
| -221 | 4 | AAAATTATGATATTT | ||
|
Position: -125
Score: 4.5 Sequence: CATATTTAAAAAATT
Locus tag: SSP0060
|
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| SSP0060 | -125 | 4.5 | CATATTTAAAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: capA | ||||
| Ortholog function: capsular polysaccharide synthesis enzyme Cap5A | ||||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_2357 | -118 | 4.1 | AATAATTAGAAATTG |
| -81 | 4.3 | AAAAATTTGAAATTT | ||
| Staphylococcus haemolyticus JCSC1435 | SH0388 | -367 | 4.6 | TATATTTAAAAAATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0060 | -125 | 4.5 | CATATTTAAAAAATT |
| Macrococcus caseolyticus JCSC5402 | MCCL_0668 | -103 | 4.2 | AATTGTATAAAAAAT |
| -63 | 4.3 | AAATTATTGAATATT | ||
|
Position: -83
Score: 4.3 Sequence: AATTTTTATAAAATG
Position: -33
Score: 4 Sequence: ATTATCTAGAAAAAT
Locus tag: SSP0070
|
||||
| SSP0070 | -83 | 4.3 | AATTTTTATAAAATG | |
| -33 | 4 | ATTATCTAGAAAAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: capM | ||||
| Ortholog function: capsular polysaccharide synthesis enzyme Cap5M | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0156 | -32 | 4.1 | ATTTTAATGAAAATT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_2344 | -118 | 4.1 | AATAATTAGAAATTG |
| -81 | 4.3 | AAAAATTTGAAATTT | ||
| Macrococcus caseolyticus JCSC5402 | MCCL_0678 | -103 | 4.2 | AATTGTATAAAAAAT |
| -63 | 4.3 | AAATTATTGAATATT | ||
|
Position: -41
Score: 5.1 Sequence: AATTATCAGAAAATT
Locus tag: SSP0251
|
||||
| SSP0251 | -41 | 5.1 | AATTATCAGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cysD | ||||
| Ortholog function: O-acetylhomoserine sulfhydrylase | ||||
| Staphylococcus haemolyticus JCSC1435 | SH0593 | -37 | 5 | AATTATCAGAATATT |
| -28 | 4.2 | AATATTCTATTAATT | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0251 | -41 | 5.1 | AATTATCAGAAAATT |
| -32 | 4.2 | AAAATTTAGAAATTA | ||
|
Position: -98
Score: 5.3 Sequence: AATTTTCTGAATATT
Locus tag: SSP0274
|
||||
| SSP0274 | -98 | 5.3 | AATTTTCTGAATATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA2396 | ||||
| Ortholog function: putative amino acid transporter | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2396 | -226 | 4.9 | AATTGTTAGAAAATT |
| -103 | 4.8 | ATTTTTCAGAATTTT | ||
| -94 | 4.2 | AATTTTTAGACAAAA | ||
| Staphylococcus capitis SK14 | STACA0001_0893 | -295 | 4.3 | AATTTGTAAAATATT |
| -160 | 4.8 | ATTTTTCAGAATTTT | ||
| -151 | 4.2 | AATTTTTAGACAAAA | ||
| Staphylococcus epidermidis ATCC 12228 | SE2147 | -165 | 4.8 | ATTTTTCAGAATTTT |
| -156 | 4.2 | AATTTTTAGACAAAA | ||
| Staphylococcus haemolyticus JCSC1435 | SH0460 | -114 | 5.1 | AATTTTCAGAAATTT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0274 | -98 | 5.3 | AATTTTCTGAATATT |
| -89 | 4.3 | AATATTTAGATATAT | ||
|
Position: -65
Score: 5.3 Sequence: AATATTCTGAAAATT
Locus tag: SSP0292
|
||||
| SSP0292 | -65 | 5.3 | AATATTCTGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA2357 | ||||
| Ortholog function: putative regulatory protein | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2357 | -188 | 4.2 | CTTTATCTAAAAATT |
| -179 | 4.7 | AAAATTCAGAATTTT | ||
| Staphylococcus capitis SK14 | STACA0001_0926 | -184 | 4.6 | AATTATCTAAATTTT |
| -175 | 4.4 | AATTTTCTGAAAACG | ||
| Staphylococcus epidermidis ATCC 12228 | SE2129 | -172 | 5.1 | AATTTTCAGAAAAAT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_2043 | -282 | 4.7 | CATATTTTGAAAATT |
| -69 | 4.5 | TATTATCAGAATATT | ||
| Staphylococcus haemolyticus JCSC1435 | SH0484 | -156 | 5.3 | AATATTCTGAAAATT |
| -147 | 4.1 | AAAATTTAGAATTTG | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0292 | -65 | 5.3 | AATATTCTGAAAATT |
| -56 | 4.2 | AAAATTAAGAAAATA | ||
|
Position: -203
Score: 4.3 Sequence: AATATTCTGATAAAA
Locus tag: SSP0294
|
||||
| SSP0294 | -203 | 4.3 | AATATTCTGATAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mtnE | ||||
| Ortholog function: transaminase MtnE involved in methionine biosynthesis via salvage pathway | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2347 | -205 | 4.8 | ATTAATCTGAAAATT |
| Staphylococcus capitis SK14 | STACA0001_0934 | -212 | 4.2 | AAATGTTTGAAAATA |
| -93 | 4.6 | ACTTATCTGAAAATT | ||
| Staphylococcus epidermidis ATCC 12228 | SE2122 | -61 | 4.4 | TTATTTCAGAAAATT |
| -52 | 4.5 | AAAATTCTAACTATT | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0010 | -257 | 4.4 | AAATGTCAGAATTTT |
| Staphylococcus haemolyticus JCSC1435 | SH0492 | -253 | 4.5 | ATAAATCTGAAAATT |
| -244 | 4.4 | AAAATTATAAATATT | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0294 | -203 | 4.3 | AATATTCTGATAAAA |
| Macrococcus caseolyticus JCSC5402 | MCCL_0180 | -222 | 4.8 | AATATTCTGAATACT |
|
Position: -218
Score: 4.6 Sequence: ATTTTTCAGAATATA
Locus tag: SSP0353
|
||||
| SSP0353 | -218 | 4.6 | ATTTTTCAGAATATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gabT | ||||
| Ortholog function: 4-aminobutyrate aminotransferase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2397 | -136 | 4 | AAAATTCTTAATTAT |
| -127 | 4.5 | AATTATCAGAATATA | ||
| Staphylococcus capitis SK14 | STACA0001_0892 | -175 | 4.7 | AATATTTTAATAATT |
| -166 | 4.3 | ATAATTCAGAAAATA | ||
| Staphylococcus epidermidis ATCC 12228 | SE2148 | -164 | 4.6 | AATATTCTAAATTAT |
| -155 | 4.6 | AATTATCAGAAAATA | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0283 | -127 | 4.8 | AAATATCTGAAAATT |
| Staphylococcus haemolyticus JCSC1435 | SH0459 | -145 | 4.6 | ATTATTCAGAAAATA |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0353 | -218 | 4.6 | ATTTTTCAGAATATA |
|
Position: -109
Score: 4.8 Sequence: CATTTTCAGAATATT
Locus tag: SSP0431
|
||||
| SSP0431 | -109 | 4.8 | CATTTTCAGAATATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hisZ | ||||
| Ortholog function: ATP phosphoribosyltransferase regulatory subunit | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2472 | -142 | 4.6 | AATTTTCTGAAAAAG |
| Staphylococcus epidermidis ATCC 12228 | SE0270 | -115 | 5.1 | AATTTTCTGAAAAAT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0637 | -125 | 4.2 | ATTTTTATTAATATT |
| -116 | 5 | AATATTCAGAATTTT | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0431 | -109 | 4.8 | CATTTTCAGAATATT |
|
Position: -75
Score: 4.9 Sequence: TATTTTCAGAATATT
Locus tag: SSP0435
|
||||
| SSP0435 | -75 | 4.9 | TATTTTCAGAATATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA2261 | ||||
| Ortholog function: putative p-aminobenzoyl-glutamate transporter | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2261 | -75 | 4.9 | CATTTTCTGAAAATT |
| Staphylococcus capitis SK14 | STACA0001_1021 | -78 | 5.1 | AAATTTCAGAAAATT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_2265 | -83 | 4.8 | AATTTTCAGAATTAT |
| Staphylococcus haemolyticus JCSC1435 | SH0589 | -75 | 5.1 | AAATTTCTGAAAATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0435 | -75 | 4.9 | TATTTTCAGAATATT |
|
Position: -165
Score: 4.9 Sequence: AATATTCTGAAAATA
Locus tag: SSP0436
|
||||
| SSP0436 | -165 | 4.9 | AATATTCTGAAAATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA2260 | ||||
| Ortholog function: putative short chain dehydrogenase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2260 | -174 | 4.9 | AATTTTCAGAAAATG |
| Staphylococcus capitis SK14 | STACA0001_1022 | -218 | 5.1 | AATTTTCTGAAATTT |
| Staphylococcus epidermidis ATCC 12228 | SE2032 | -218 | 4.6 | ATTTTTCTGAAATAT |
| Staphylococcus haemolyticus JCSC1435 | SH0590 | -209 | 5.1 | AATTTTCAGAAATTT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0436 | -165 | 4.9 | AATATTCTGAAAATA |
|
Position: 22
Score: 4.2 Sequence: AATTAATTGAATATT
Position: 34
Score: 4 Sequence: ATTATTCAGTAAACT
Locus tag: SSP0454
|
||||
| SSP0454 | 22 | 4.2 | AATTAATTGAATATT | |
| 34 | 4 | ATTATTCAGTAAACT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: opuCD | ||||
| Ortholog function: glycine betaine/carnitine/choline ABC transporter opuCD | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2234 | -76 | 4.1 | ATTTGTTTAACAATT |
| Staphylococcus capitis SK14 | STACA0001_1039 | -145 | 4.3 | CATATTCAAAATTTT |
| Staphylococcus epidermidis ATCC 12228 | SE2015 | -80 | 4.1 | ATTTGTTTAACAATT |
| Staphylococcus epidermidis ATCC 12228 | SE0225 | -43 | 4 | TATTTTTTAACAAAT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1931 | -517 | 4.7 | ATTTGTCTGAATATT |
| Staphylococcus haemolyticus JCSC1435 | SH0609 | -134 | 4.1 | ATTAATTAAAATTTT |
| Macrococcus caseolyticus JCSC5402 | MCCL_1464 | -93 | 4.5 | TATTATCAAAAAATT |
|
Position: -99
Score: 4.8 Sequence: ATTTATCAGAAAATT
Locus tag: SSP0460
|
||||
| SSP0460 | -99 | 4.8 | ATTTATCAGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA0165 | ||||
| Ortholog function: hypothetical protein | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0165 | -97 | 4.2 | TTTTATCTAAATATT |
| -88 | 4.8 | AATATTTAAAAAAAT | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0460 | -99 | 4.8 | ATTTATCAGAAAATT |
|
Position: -81
Score: 5.2 Sequence: AATATTTAGAAAATT
Locus tag: SSP0585
|
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| SSP0585 | -81 | 5.2 | AATATTTAGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yocS | ||||
| Ortholog function: Uncharacterized sodium-dependent transporter yocS | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2112 | -87 | 4.2 | AATAATCTTAATTTT |
| -78 | 4.9 | AATTTTCAGAAAAGT | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0585 | -90 | 4.5 | AAAAATTAGAATATT |
| -81 | 5.2 | AATATTTAGAAAATT | ||
|
Position: -100
Score: 4.3 Sequence: ATAATTCAAAATAAT
Position: -88
Score: 4.4 Sequence: AATTGTTTAAATTTT
Position: -79
Score: 4.4 Sequence: AATTTTTTGAATTTA
Locus tag: SSP0591
|
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| SSP0591 | -100 | 4.3 | ATAATTCAAAATAAT | |
| -88 | 4.4 | AATTGTTTAAATTTT | ||
| -79 | 4.4 | AATTTTTTGAATTTA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA2109 | ||||
| Ortholog function: probable amino-acid or metabolite transporter | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2109 | -183 | 4.7 | ATTTTTTAGAAAAAT |
| Staphylococcus capitis SK14 | STACA0001_1171 | -181 | 5.1 | AATTTTCAGAAAAAT |
| -101 | 4.1 | AATTGTAAAAATTTT | ||
| Staphylococcus epidermidis ATCC 12228 | SE1892 | -98 | 4.4 | AATTGTAAAAATATT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1812 | -468 | 4.4 | ATTATACTGAAAATT |
| -414 | 4.4 | AATATTCAAATAATA | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0591 | -88 | 4.4 | AATTGTTTAAATTTT |
| -79 | 4.4 | AATTTTTTGAATTTA | ||
|
Position: -190
Score: 4.1 Sequence: TATTTTTATAAATTT
Position: -181
Score: 4.6 Sequence: AAATTTCAGAAAATG
Locus tag: SSP0752
|
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| SSP0752 | -190 | 4.1 | TATTTTTATAAATTT | |
| -181 | 4.6 | AAATTTCAGAAAATG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hmrA | ||||
| Ortholog function: N-acyl-L-amino acid amidohydrolase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1935 | -143 | 4.5 | AGTTATTAGAAAATT |
| Staphylococcus capitis SK14 | STACA0001_0837 | -235 | 4.6 | AATTGTAAGAAAATT |
| Staphylococcus epidermidis ATCC 12228 | SE1731 | -113 | 4.6 | AATTGTAAGAAAATT |
| -102 | 4.2 | AATTGTGTAAAAATT | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1636 | -176 | 4.1 | AATTTATTAAATTTT |
| Staphylococcus haemolyticus JCSC1435 | SH0902 | -179 | 4.7 | AATTTTCAAAATTAT |
| -52 | 4.5 | AATATCCAAAATATT | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0752 | -190 | 4.1 | TATTTTTATAAATTT |
| -181 | 4.6 | AAATTTCAGAAAATG | ||
|
Position: 31
Score: 5 Sequence: AATTGTCAGAAAATT
Locus tag: SSP0824
|
||||
| SSP0824 | 31 | 5 | AATTGTCAGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ilvB | ||||
| Ortholog function: acetolactate synthase large subunit | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1859 | -301 | 4.9 | AATTTTTAGACAATT |
| -53 | 4.5 | ATATTTCAGAATTTT | ||
| Staphylococcus capitis SK14 | STACA0001_0525 | -327 | 4.9 | AATTGTTAGAAAATT |
| Staphylococcus epidermidis ATCC 12228 | SE1655 | -330 | 5.2 | AATTTTTAGAAAATT |
| -321 | 4.1 | AAAATTCTAAATTTA | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1560 | -316 | 4.8 | AATTTTAAAAAAATT |
| -307 | 4.3 | AAAATTCTAATAAAT | ||
| Staphylococcus haemolyticus JCSC1435 | SH0979 | -321 | 4.4 | AGTTGTTAGAAAATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0824 | -323 | 4.2 | AATTGACAGAAAAAT |
| -266 | 4 | ATTTATCAAATTTTT | ||
| -258 | 4.7 | AATTTTTAGATATTT | ||
| -249 | 4.1 | ATATTTCAAACAAAT | ||
| Macrococcus caseolyticus JCSC5402 | MCCL_0859 | -266 | 5.2 | AATTTTTAGAAAATT |
| -257 | 4.7 | AAAATTTTAAATATT | ||
|
Position: -258
Score: 4.7 Sequence: AATTTTTAGATATTT
Locus tag: SSP0825
|
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| SSP0825 | -258 | 4.7 | AATTTTTAGATATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ilvD | ||||
| Ortholog function: dihydroxy-acid dehydratase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1858 | -301 | 4.9 | AATTTTTAGACAATT |
| -53 | 4.5 | ATATTTCAGAATTTT | ||
| Staphylococcus capitis SK14 | STACA0001_0526 | -327 | 4.9 | AATTGTTAGAAAATT |
| Staphylococcus epidermidis ATCC 12228 | SE1654 | -330 | 5.2 | AATTTTTAGAAAATT |
| -321 | 4.1 | AAAATTCTAAATTTA | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1559 | -316 | 4.8 | AATTTTAAAAAAATT |
| -307 | 4.3 | AAAATTCTAATAAAT | ||
| Staphylococcus haemolyticus JCSC1435 | SH0980 | -321 | 4.4 | AGTTGTTAGAAAATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0825 | -323 | 4.2 | AATTGACAGAAAAAT |
| -266 | 4 | ATTTATCAAATTTTT | ||
| -258 | 4.7 | AATTTTTAGATATTT | ||
| -249 | 4.1 | ATATTTCAAACAAAT | ||
| Macrococcus caseolyticus JCSC5402 | MCCL_0860 | -266 | 5.2 | AATTTTTAGAAAATT |
| -257 | 4.7 | AAAATTTTAAATATT | ||
|
Position: -63
Score: 4.2 Sequence: ATTATATTGAATATT
Locus tag: SSP0936
|
||||
| SSP0936 | -63 | 4.2 | ATTATATTGAATATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: artQ | ||||
| Ortholog function: Arginine ABC transport system ArtQ | ||||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0936 | -63 | 4.2 | ATTATATTGAATATT |
|
Position: 13
Score: 3.9 Sequence: AAAATTTATATAAAT
Locus tag: SSP0938
|
||||
| SSP0938 | 13 | 3.9 | AAAATTTATATAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: artM | ||||
| Ortholog function: Arginine ABC transport system ATP-binding protein ArtM | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1674 | -167 | 4.3 | ATAATTATGAATATT |
| Staphylococcus capitis SK14 | STACA0001_0719 | 6 | 4.2 | AAAATTATTAAAATT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1431 | -83 | 5.1 | AAATTTCAGAAAATT |
| -74 | 4 | AAAATTTAAAAATTA | ||
| Staphylococcus haemolyticus JCSC1435 | SH1105 | -72 | 4 | CTTTTTTAAAATTTT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0938 | -63 | 4.2 | ATTATATTGAATATT |
| Macrococcus caseolyticus JCSC5402 | MCCL_1583 | -87 | 4.3 | AATTATTAGAACATT |
|
Position: -32
Score: 4 Sequence: ATTTTTTTGTATTTT
Locus tag: SSP0993
|
||||
| SSP0993 | -32 | 4 | ATTTTTTTGTATTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: opuCC | ||||
| Ortholog function: glycine betaine/carnitine/choline ABC transporter opuCC | ||||
| Staphylococcus capitis SK14 | STACA0001_1038 | -145 | 4.3 | CATATTCAAAATTTT |
| Staphylococcus epidermidis ATCC 12228 | SE2016 | -80 | 4.1 | ATTTGTTTAACAATT |
| Staphylococcus haemolyticus JCSC1435 | SH0608 | -134 | 4.1 | ATTAATTAAAATTTT |
|
Position: -119
Score: 4.9 Sequence: AATTTTCAAAATAAT
Locus tag: SSP1029
|
||||
| SSP1029 | -119 | 4.9 | AATTTTCAAAATAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: acuA | ||||
| Ortholog function: hypothetical protein | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1555 | -114 | 4.1 | ACATTTCTAATTATT |
| -105 | 4.6 | ATTATTCAAAATTTT | ||
| -56 | 4.3 | AATTTTCTATATAAT | ||
| Staphylococcus capitis SK14 | STACA0001_0627 | -110 | 4.3 | ATTTTTCAAAAATCT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1339 | -159 | 4.1 | ATAATTATGATAATT |
| -150 | 4.2 | ATAATTCTGATTTTT | ||
| Staphylococcus haemolyticus JCSC1435 | SH1188 | -92 | 4.9 | AATTTTTAGATAATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1029 | -119 | 4.9 | AATTTTCAAAATAAT |
| Macrococcus caseolyticus JCSC5402 | MCCL_1410 | -39 | 4.5 | ATTTTTCAAAATATA |
|
Position: -75
Score: 4.9 Sequence: ATTATTTTGAAAATT
Locus tag: SSP1030
|
||||
| SSP1030 | -75 | 4.9 | ATTATTTTGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: acsA | ||||
| Ortholog function: acetyl-CoA synthetase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1554 | -78 | 4.6 | AAAATTTTGAATAAT |
| -69 | 4.1 | AATAATTAGAAATGT | ||
| Staphylococcus capitis SK14 | STACA0001_0626 | -78 | 4.3 | AGATTTTTGAAAAAT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1338 | -96 | 4.2 | AAAAATCAGAATTAT |
| -87 | 4.1 | AATTATCATAATTAT | ||
| Staphylococcus haemolyticus JCSC1435 | SH1189 | -87 | 4.9 | AATTATCTAAAAATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1030 | -75 | 4.9 | ATTATTTTGAAAATT |
| Macrococcus caseolyticus JCSC5402 | MCCL_1409 | -48 | 4.5 | TATATTTTGAAAAAT |
|
Position: -55
Score: 4.9 Sequence: TATTTTCTGAAAATT
Locus tag: SSP1040
|
||||
| SSP1040 | -55 | 4.9 | TATTTTCTGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA1544 | ||||
| Ortholog function: putative phosphoserine transaminase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1544 | -54 | 5.4 | AATTTTCAGAAAATT |
| Staphylococcus capitis SK14 | STACA0001_0615 | -53 | 5.2 | AATATTCAGAATATT |
| Staphylococcus epidermidis ATCC 12228 | SE1400 | -54 | 5 | AATATTCAGAATTTT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1329 | -55 | 4.9 | TATTTTCAGAATATT |
| Staphylococcus haemolyticus JCSC1435 | SH1201 | -55 | 5 | AATTATCAGAATATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1040 | -55 | 4.9 | TATTTTCTGAAAATT |
|
Position: -182
Score: 4.2 Sequence: AATTTTTAAAATTGT
Locus tag: SSP1203
|
||||
| SSP1203 | -182 | 4.2 | AATTTTTAAAATTGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sodA | ||||
| Ortholog function: superoxide dismutase SodA | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1382 | -140 | 4.1 | AAATGTTTAATTATT |
| Staphylococcus capitis SK14 | STACA0001_1791 | -219 | 4.3 | TATTTTCAAAAAACT |
| -184 | 4.2 | AATGGTCTGAAAAAT | ||
| Staphylococcus epidermidis ATCC 12228 | SE1240 | -101 | 4.4 | AATAATTTAATAATT |
| Staphylococcus haemolyticus JCSC1435 | SH1363 | -248 | 4.3 | AATTATTTAAAAATA |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1203 | -182 | 4.2 | AATTTTTAAAATTGT |
|
Position: -67
Score: 4.6 Sequence: AATATTTTGATAAAT
Locus tag: SSP1221
|
||||
| SSP1221 | -67 | 4.6 | AATATTTTGATAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA1364 | ||||
| Ortholog function: putative sulfurtransferase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1364 | -66 | 4.8 | AATATTTTGATAATT |
| Staphylococcus capitis SK14 | STACA0001_1771 | -66 | 4.6 | AATATTTTGATAAAT |
| Staphylococcus epidermidis ATCC 12228 | SE1218 | -66 | 4.6 | AATATTTTGATAAAT |
| Staphylococcus haemolyticus JCSC1435 | SH1382 | -66 | 4.3 | AAAATTTTGATAAAT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1221 | -67 | 4.6 | AATATTTTGATAAAT |
|
Position: -121
Score: 4.6 Sequence: ATTTATCAAAATATT
Locus tag: SSP1222
|
||||
| SSP1222 | -121 | 4.6 | ATTTATCAAAATATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA1363 | ||||
| Ortholog function: Lipoate-protein ligase A | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1363 | -106 | 4.8 | AATTATCAAAATATT |
| Staphylococcus capitis SK14 | STACA0001_1770 | -109 | 4.6 | ATTTATCAAAATATT |
| Staphylococcus epidermidis ATCC 12228 | SE1217 | -108 | 4.6 | ATTTATCAAAATATT |
| Staphylococcus haemolyticus JCSC1435 | SH1383 | -100 | 4.3 | ATTTATCAAAATTTT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1222 | -121 | 4.6 | ATTTATCAAAATATT |
|
Position: -113
Score: 4.6 Sequence: ATTTTTATGAATATT
Locus tag: SSP1278
|
||||
| SSP1278 | -113 | 4.6 | ATTTTTATGAATATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aroC | ||||
| Ortholog function: chorismate synthase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1299 | -150 | 4.6 | AATATTAAGATAATT |
| -141 | 4.2 | ATAATTCTGACATTT | ||
| Staphylococcus epidermidis ATCC 12228 | SE1155 | -138 | 4 | TCTTTTTTAAATATT |
| Staphylococcus haemolyticus JCSC1435 | SH1446 | -124 | 4.7 | AATTATTAAAATATT |
| -115 | 4.6 | AATATTCTAATAAAT | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1278 | -113 | 4.6 | ATTTTTATGAATATT |
|
Position: -26
Score: 4.1 Sequence: AATTAACAGATTATT
Position: 19
Score: 4 Sequence: ATAAATCTAATAATT
Locus tag: SSP1279
|
||||
| SSP1279 | -26 | 4.1 | AATTAACAGATTATT | |
| 19 | 4 | ATAAATCTAATAATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aroB | ||||
| Ortholog function: 3-dehydroquinate synthase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1298 | -150 | 4.6 | AATATTAAGATAATT |
| -141 | 4.2 | ATAATTCTGACATTT | ||
| Staphylococcus epidermidis ATCC 12228 | SE1154 | -138 | 4 | TCTTTTTTAAATATT |
| Staphylococcus haemolyticus JCSC1435 | SH1447 | -124 | 4.7 | AATTATTAAAATATT |
| -115 | 4.6 | AATATTCTAATAAAT | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1279 | -113 | 4.6 | ATTTTTATGAATATT |
|
Position: -95
Score: 4.5 Sequence: ATATTTTTAAATATT
Position: -86
Score: 5 Sequence: AATATTCTGAAATTT
Locus tag: SSP1343
|
||||
| SSP1343 | -95 | 4.5 | ATATTTTTAAATATT | |
| -86 | 5 | AATATTCTGAAATTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: braB | ||||
| Ortholog function: branched-chain amino acid transport system | ||||
| Staphylococcus capitis SK14 | STACA0001_1652 | -85 | 4.7 | AATTTTCTGAAATTA |
| Staphylococcus epidermidis ATCC 12228 | SE1090 | -87 | 5.1 | AATTTTCTGAAATTT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1051 | -96 | 4.7 | AATTTTCAGAAAGTT |
| Staphylococcus haemolyticus JCSC1435 | SH1502 | -87 | 4.2 | AATTTTCTGAAATCA |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1343 | -95 | 4.5 | ATATTTTTAAATATT |
| -86 | 5 | AATATTCTGAAATTT | ||
| Macrococcus caseolyticus JCSC5402 | MCCL_1059 | -84 | 4.9 | AATATTCAGAAAATA |
|
Position: -350
Score: 4.5 Sequence: ATTTTTCAGTAAATT
Position: -341
Score: 4.3 Sequence: TAAATTTAAAAAATT
Locus tag: SSP1357
|
||||
| SSP1357 | -350 | 4.5 | ATTTTTCAGTAAATT | |
| -341 | 4.3 | TAAATTTAAAAAATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lysC | ||||
| Ortholog function: aspartokinase II | ||||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1037 | -340 | 4.3 | AAATTTCTAAAAATC |
| Staphylococcus haemolyticus JCSC1435 | SH1518 | -344 | 4.1 | ATTTTTCAGTCTATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1357 | -350 | 4.5 | ATTTTTCAGTAAATT |
| -341 | 4.3 | TAAATTTAAAAAATT | ||
|
Position: -36
Score: 4.8 Sequence: ACTATTCTGAAAATT
Locus tag: SSP1387
|
||||
| SSP1387 | -36 | 4.8 | ACTATTCTGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: tyrA | ||||
| Ortholog function: prephenate dehydrogenase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1197 | -34 | 5.1 | ATTATTCTGAAAATT |
| Staphylococcus capitis SK14 | STACA0001_1611 | -35 | 4.8 | ACTATTCTGAAAATT |
| Staphylococcus epidermidis ATCC 12228 | SE1047 | -251 | 4.4 | AATTATCTGATTTTT |
| -242 | 4.6 | ATTTTTCTAATTATT | ||
| -35 | 4.4 | GTTATTCTGAAAATT | ||
| Staphylococcus haemolyticus JCSC1435 | SH1544 | -35 | 4.8 | CATATTCTGAAAATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1387 | -36 | 4.8 | ACTATTCTGAAAATT |
|
Position: -129
Score: 4.4 Sequence: AAATGTTTAAATATT
Position: -120
Score: 4.1 Sequence: AATATTGCGAAAATT
Locus tag: SSP1432
|
||||
| SSP1432 | -129 | 4.4 | AAATGTTTAAATATT | |
| -120 | 4.1 | AATATTGCGAAAATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: katA | ||||
| Ortholog function: catalase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1170 | -111 | 4.1 | AAAAATTAAAATTTT |
| -102 | 4.7 | AATTTTCTGATTTTT | ||
| Staphylococcus capitis SK14 | STACA0001_1577 | -131 | 4.7 | AATATTTAAAAATTT |
| -121 | 5.1 | AATTTTCTGAAATTT | ||
| Staphylococcus epidermidis ATCC 12228 | SE1016 | -142 | 4.1 | AATTGTTAAATTTTT |
| -133 | 4.6 | ATTTTTCTGATATTT | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_2336 | -28 | 4.1 | ATTATTCTAAATAAG |
| Staphylococcus haemolyticus JCSC1435 | SH1573 | -123 | 4.4 | AAAATTTTAAATTTT |
| -114 | 5.1 | AATTTTCTGAAATTT | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1432 | -129 | 4.4 | AAATGTTTAAATATT |
|
Position: -111
Score: 4.4 Sequence: AATATTTAAACATTT
Locus tag: SSP1433
|
||||
| SSP1433 | -111 | 4.4 | AATATTTAAACATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rocC | ||||
| Ortholog function: amino acid permease | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1169 | -110 | 4.7 | AAAAATCAGAAAATT |
| -101 | 4.1 | AAAATTTTAATTTTT | ||
| Staphylococcus capitis SK14 | STACA0001_1576 | -112 | 5.1 | AAATTTCAGAAAATT |
| -102 | 4.7 | AAATTTTTAAATATT | ||
| Staphylococcus epidermidis ATCC 12228 | SE1015 | -112 | 4.6 | AAATATCAGAAAAAT |
| -103 | 4.1 | AAAAATTTAACAATT | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0975 | -121 | 4.3 | TTTTTTCAGAATTTT |
| -112 | 4.7 | AATTTTTTAAATTTT | ||
| Staphylococcus haemolyticus JCSC1435 | SH1574 | -114 | 5.1 | AAATTTCAGAAAATT |
| -105 | 4.4 | AAAATTTAAAATTTT | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1433 | -111 | 4.4 | AATATTTAAACATTT |
| Macrococcus caseolyticus JCSC5402 | MCCL_0990 | -56 | 4.4 | AATTTTCTTAATTAT |
|
Position: -168
Score: 4.7 Sequence: AAAAATCAGAAAATT
Locus tag: SSP1438
|
||||
| SSP1438 | -168 | 4.7 | AAAAATCAGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hom | ||||
| Ortholog function: homoserine dehydrogenase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1164 | -170 | 4.7 | AAAAATCAGAAAATT |
| -118 | 4.6 | TATATTTTGAATATT | ||
| Staphylococcus capitis SK14 | STACA0001_1571 | -170 | 4.7 | AAAAATCAGAAAATT |
| -91 | 4.3 | AAAATTAAGAATAAT | ||
| Staphylococcus epidermidis ATCC 12228 | SE1009 | -170 | 4.7 | AAAAATCAGAAAATT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0970 | -127 | 4.2 | AAATTTCAACATATT |
| -109 | 4.4 | AATTTTTTGAACTTT | ||
| Staphylococcus haemolyticus JCSC1435 | SH1579 | -178 | 4.7 | AAAAATCAGAAAATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1438 | -168 | 4.7 | AAAAATCAGAAAATT |
|
Position: -35
Score: 4.7 Sequence: AATTTTCTGATTTTT
Locus tag: SSP1439
|
||||
| SSP1439 | -35 | 4.7 | AATTTTCTGATTTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: thrA | ||||
| Ortholog function: aspartokinase III | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1163 | -87 | 4.6 | AATATTCAAAATATA |
| -35 | 4.7 | AATTTTCTGATTTTT | ||
| Staphylococcus capitis SK14 | STACA0001_1570 | -33 | 4.7 | AATTTTCTGATTTTT |
| Staphylococcus epidermidis ATCC 12228 | SE1008 | -33 | 4.7 | AATTTTCTGATTTTT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0969 | -97 | 4.4 | AAAGTTCAAAAAATT |
| -79 | 4.2 | AATATGTTGAAATTT | ||
| Staphylococcus haemolyticus JCSC1435 | SH1580 | -35 | 4.7 | AATTTTCTGATTTTT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1439 | -35 | 4.7 | AATTTTCTGATTTTT |
|
Position: -157
Score: 4.9 Sequence: AATTTTCTAATAATT
Position: -56
Score: 4.4 Sequence: ATTAATCTGATTATT
Locus tag: SSP1452
|
||||
| SSP1452 | -157 | 4.9 | AATTTTCTAATAATT | |
| -56 | 4.4 | ATTAATCTGATTATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glnR | ||||
| Ortholog function: HTH-type transcriptional regulator GlnR | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1149 | -187 | 4.4 | ATTTATCAGATTATT |
| -178 | 4.2 | ATTATTTTTAAAAAT | ||
| Staphylococcus capitis SK14 | STACA0001_1553 | -202 | 4.3 | TTTTGTCAGAAAATT |
| -191 | 4.1 | AATTATAAAATTATT | ||
| -150 | 4.2 | ATTAATTAAAAATTT | ||
| Staphylococcus epidermidis ATCC 12228 | SE0986 | -194 | 4.8 | AAATGTCTGAAAATT |
| -185 | 4.7 | AAAATTTTAAAAATT | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0958 | -157 | 4.8 | AATTTACAGAAAATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1452 | -179 | 4.2 | ATTTTTTTGAATAAA |
| -157 | 4.9 | AATTTTCTAATAATT | ||
| -56 | 4.4 | ATTAATCTGATTATT | ||
|
Position: -104
Score: 4.3 Sequence: ATAATTCAAAATAAT
Locus tag: SSP1542
|
||||
| SSP1542 | -104 | 4.3 | ATAATTCAAAATAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aur | ||||
| Ortholog function: zinc metalloproteinase aureolysin | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2430 | -68 | 4.6 | ACTTTTCTGAAAAAT |
| Staphylococcus capitis SK14 | STACA0001_1850 | -30 | 4.2 | CTTTTTCAAAAATTT |
| 7 | 4.4 | ATTTTTCAAAATATG | ||
| Staphylococcus epidermidis ATCC 12228 | SE2219 | -69 | 4.9 | ACTTTTCAGAAAATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1542 | -104 | 4.3 | ATAATTCAAAATAAT |
|
Position: -38
Score: 4.7 Sequence: ACTTTTTAGAAAATT
Locus tag: SSP1675
|
||||
| SSP1675 | -38 | 4.7 | ACTTTTTAGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pycA | ||||
| Ortholog function: pyruvate carboxylase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0963 | -41 | 4.6 | ATTAGTTAGAAAATT |
| Staphylococcus capitis SK14 | STACA0001_2249 | -42 | 4.6 | ATTAGTTAGAAAATT |
| -33 | 4.4 | AAAATTCAAAAAATA | ||
| Staphylococcus epidermidis ATCC 12228 | SE0813 | -40 | 4.1 | TATTATCTAATTATT |
| -31 | 4.9 | ATTATTTAGAAAATT | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0740 | -34 | 4.6 | AAAATTCAAATAATT |
| Staphylococcus haemolyticus JCSC1435 | SH1838 | -41 | 4.5 | ATTAGTTAGAATATT |
| -32 | 4 | AATATTCAAACTTTA | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1675 | -38 | 4.7 | ACTTTTTAGAAAATT |
| -29 | 4.1 | AAAATTCAAAATTTA | ||
|
Position: -186
Score: 4.6 Sequence: AATATTCAGACTTTT
Position: -92
Score: 4.5 Sequence: AAATTTATAAAAATT
Locus tag: SSP1755
|
||||
| SSP1755 | -186 | 4.6 | AATATTCAGACTTTT | |
| -92 | 4.5 | AAATTTATAAAAATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: comK | ||||
| Ortholog function: competence transcription factor | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0882 | -147 | 4.9 | AATATTCTGACTATT |
| Staphylococcus capitis SK14 | STACA0001_0106 | -151 | 4.7 | AATATTCTGACATTT |
| Staphylococcus epidermidis ATCC 12228 | SE0731 | -147 | 4.7 | AATATTCTGACATTT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0642 | -145 | 4.6 | AATATTCTGACTTTT |
| -136 | 4.1 | ACTTTTTAAAAAATA | ||
| Staphylococcus haemolyticus JCSC1435 | SH1926 | -148 | 4.6 | AATATTCTGACTTTT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1755 | -186 | 4.6 | AATATTCAGACTTTT |
| -92 | 4.5 | AAATTTATAAAAATT | ||
| Macrococcus caseolyticus JCSC5402 | MCCL_1546 | -195 | 4.8 | ATAATTCTGAAAATT |
| -186 | 4.4 | AAAATTTAAATTATT | ||
| -86 | 4.7 | AAATTTCTTAAAATT | ||
|
Position: -174
Score: 4.5 Sequence: AATTTTTATAAATTT
Position: -80
Score: 4.6 Sequence: AAAAGTCTGAATATT
Locus tag: SSP1756
|
||||
| SSP1756 | -174 | 4.5 | AATTTTTATAAATTT | |
| -80 | 4.6 | AAAAGTCTGAATATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA0883 | ||||
| Ortholog function: hypothetical protein | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0883 | -77 | 4.9 | AATAGTCAGAATATT |
| Staphylococcus capitis SK14 | STACA0001_0107 | -83 | 4.7 | AAATGTCAGAATATT |
| Staphylococcus epidermidis ATCC 12228 | SE0729 | -82 | 4.7 | AAATGTCAGAATATT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0643 | -178 | 4.2 | AATTATAAAAATAAT |
| -91 | 4.1 | TATTTTTTAAAAAGT | ||
| -82 | 4.6 | AAAAGTCAGAATATT | ||
| Staphylococcus haemolyticus JCSC1435 | SH1925 | -80 | 4.6 | AAAAGTCAGAATATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1756 | -174 | 4.5 | AATTTTTATAAATTT |
| -80 | 4.6 | AAAAGTCTGAATATT | ||
|
Position: -56
Score: 4.8 Sequence: ATATTTCTGAATATT
Locus tag: SSP1794
|
||||
| SSP1794 | -56 | 4.8 | ATATTTCTGAATATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: oppB | ||||
| Ortholog function: oligopeptide ABC transporter permease protein OppB | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0845 | -66 | 4.7 | AGATTTCAGAAAATT |
| Staphylococcus capitis SK14 | STACA0001_0146 | -36 | 4.2 | AATATACATAATATT |
| -27 | 4.6 | AATATTCTGAAAAAA | ||
| Staphylococcus epidermidis ATCC 12228 | SE0680 | -63 | 4.9 | ATATTTCTGAAAATT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0588 | -113 | 5.2 | AATATTCTAAAAATT |
| -65 | 4.2 | AATATTAAAATATTT | ||
| -56 | 4.9 | ATATTTCTGAAAATT | ||
| Staphylococcus haemolyticus JCSC1435 | SH1970 | -116 | 4.7 | AATTTTGTGAAAATT |
| -60 | 4.9 | ATATTTCTGAAAATT | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1794 | -56 | 4.8 | ATATTTCTGAATATT |
| Macrococcus caseolyticus JCSC5402 | MCCL_0605 | -186 | 4.8 | AATTTTTAAAAAAAT |
| -132 | 4.8 | AATCTTCTGAAAATT | ||
|
Position: -109
Score: 4.6 Sequence: AATATTCTCAATATT
Locus tag: SSP1991
|
||||
| SSP1991 | -109 | 4.6 | AATATTCTCAATATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: tppB | ||||
| Ortholog function: di-tripepride ABC transporter | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0682 | -112 | 4.6 | AATATTCTCAATATT |
| -103 | 4.1 | AATATTTTTATTTTT | ||
| Staphylococcus capitis SK14 | STACA0001_0301 | -124 | 4.3 | AATTGACTGAATATT |
| -115 | 4.5 | AATATTCATATTATT | ||
| -98 | 4.8 | TATTTTTTGAAAATT | ||
| Staphylococcus epidermidis ATCC 12228 | SE0509 | -107 | 4 | CTTTTTTTAAATTTT |
| -98 | 5.2 | AATTTTTTGAAAATT | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0374 | -114 | 5.3 | AATATTCTGAAAATT |
| -88 | 4.5 | TATTTTAAGAAAATT | ||
| Staphylococcus haemolyticus JCSC1435 | SH2166 | -102 | 5 | AAATTTCTAAAAATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1991 | -118 | 4.1 | AAATAACAGAATATT |
| -109 | 4.6 | AATATTCTCAATATT | ||
| Macrococcus caseolyticus JCSC5402 | MCCL_0478 | -117 | 4.6 | AACTTTTTGAAAATT |
| -36 | 5.3 | AATTTTCAGAATATT | ||
|
Position: -190
Score: 5.1 Sequence: AATTTTCAGAAAAAT
Locus tag: SSP2051
|
||||
| SSP2051 | -190 | 5.1 | AATTTTCAGAAAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA0626 | ||||
| Ortholog function: hypothetical protein | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0626 | -195 | 4.5 | ATATTTTTGAAAAAT |
| Staphylococcus capitis SK14 | STACA0001_0358 | -200 | 4.6 | ATTAATTAGAAAATT |
| -142 | 4.3 | AATTTTAAGTAAATT | ||
| -98 | 4.2 | ATAATTTTGAAAATA | ||
| Staphylococcus haemolyticus JCSC1435 | SH2222 | -200 | 4.1 | TTTATTTAGAATTTT |
| -191 | 4.6 | AATTTTCAGATAATA | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP2051 | -190 | 5.1 | AATTTTCAGAAAAAT |
|
Position: -38
Score: 5.1 Sequence: ATTTTTCTGAAAATT
Locus tag: SSP2052
|
||||
| SSP2052 | -38 | 5.1 | ATTTTTCTGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yxjH | ||||
| Ortholog function: putative methionine synthase II | ||||
| Staphylococcus haemolyticus JCSC1435 | SH2223 | -45 | 4.6 | TATTATCTGAAAATT |
| -36 | 4.1 | AAAATTCTAAATAAA | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP2052 | -38 | 5.1 | ATTTTTCTGAAAATT |
|
Position: -166
Score: 4.8 Sequence: AAATTTCAGAATTTT
Locus tag: SSP2074
|
||||
| SSP2074 | -166 | 4.8 | AAATTTCAGAATTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA0601 | ||||
| Ortholog function: hypothetical protein | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0601 | -400 | 5 | AAAATTCAGAATATT |
| -391 | 4.1 | AATATTTTTAATTAT | ||
| Staphylococcus capitis SK14 | STACA0001_0382 | -211 | 5 | AAAATTCAGAATATT |
| Staphylococcus epidermidis ATCC 12228 | SE0420 | -206 | 5 | AAAATTCAGAATATT |
| -197 | 4.1 | AATATTTAAATTTAT | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0294 | -120 | 4.8 | AATTTTCAGAATTAT |
| Staphylococcus haemolyticus JCSC1435 | SH2248 | -172 | 5 | AAAATTCAGAAAATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP2074 | -166 | 4.8 | AAATTTCAGAATTTT |
|
Position: -86
Score: 5.2 Sequence: AATTTTTTGAAAATT
Locus tag: SSP2163
|
||||
| SSP2163 | -86 | 5.2 | AATTTTTTGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ilvE | ||||
| Ortholog function: branched-chain amino acid aminotransferase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0512 | -92 | 5.2 | AATTTTTAGAAAATT |
| Staphylococcus capitis SK14 | STACA0001_0476 | -101 | 4.4 | TTTATTTTGAATATT |
| -92 | 4.7 | AATATTTAGAAAACT | ||
| Staphylococcus epidermidis ATCC 12228 | SE0318 | -99 | 4.1 | TCTATTTTGAATATT |
| -90 | 5.2 | AATATTTAGAAAATT | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0215 | -101 | 4.5 | ATTTTTTTAAATTTT |
| -92 | 4.8 | AATTTTCTAAAAACT | ||
| Staphylococcus haemolyticus JCSC1435 | SH2449 | -91 | 5.2 | AATTTTTAGAAAATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP2163 | -86 | 5.2 | AATTTTTTGAAAATT |
| Macrococcus caseolyticus JCSC5402 | MCCL_1855 | -85 | 4.8 | AATTTTCTAAAAACT |
|
Position: -126
Score: 4.1 Sequence: AATTTTTTAATATTA
Locus tag: SSP2257
|
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| SSP2257 | -126 | 4.1 | AATTTTTTAATATTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: capH | ||||
| Ortholog function: capsular polysaccharide synthesis enzyme Cap5H | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0151 | -32 | 4.1 | ATTTTAATGAAAATT |
|
Position: -34
Score: 5 Sequence: AATTTTCAGAATTTT
Locus tag: SSP2284
|
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| SSP2284 | -34 | 5 | AATTTTCAGAATTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gltB | ||||
| Ortholog function: glutamate synthase large subunit | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0430 | -35 | 4.3 | TAATATCAGAATATT |
| -26 | 4.4 | AATATTCTAAAAAAG | ||
| Staphylococcus capitis SK14 | STACA0001_1494 | -174 | 4.6 | AAAATTCTAAAATTT |
| -36 | 5 | AATTGTCAGAAAATT | ||
| Staphylococcus epidermidis ATCC 12228 | SE2312 | -35 | 5 | AATTGTCAGAAAATT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0105 | -117 | 4.5 | AATAATTAGAATAAT |
| -43 | 4.7 | AAAAATCTGAAAATT | ||
| Staphylococcus haemolyticus JCSC1435 | SH2540 | -34 | 5.4 | AATTTTCTGAAAATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP2284 | -34 | 5 | AATTTTCAGAATTTT |
|
Position: -118
Score: 5 Sequence: AAAATTCTGAAAATT
Locus tag: SSP2285
|
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| SSP2285 | -118 | 5 | AAAATTCTGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gltC | ||||
| Ortholog function: transcription activator of glutamate synthase operon | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0429 | -169 | 4.4 | CTTTTTTAGAATATT |
| -160 | 4.3 | AATATTCTGATATTA | ||
| Staphylococcus capitis SK14 | STACA0001_1493 | -179 | 5 | AATTTTCTGACAATT |
| -41 | 4.6 | AAATTTTAGAATTTT | ||
| Staphylococcus epidermidis ATCC 12228 | SE2313 | -171 | 5 | AATTTTCTGACAATT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0104 | -113 | 4.7 | AATTTTCAGATTTTT |
| -39 | 4.5 | ATTATTCTAATTATT | ||
| Staphylococcus haemolyticus JCSC1435 | SH2541 | -138 | 5.4 | AATTTTCAGAAAATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP2285 | -118 | 5 | AAAATTCTGAAAATT |
|
Position: -94
Score: 4.5 Sequence: AATTATCTGACATTT
Locus tag: SSP2299
|
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| SSP2299 | -94 | 4.5 | AATTATCTGACATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: brnQ2 | ||||
| Ortholog function: branched-chain amino acid transport system | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0294 | -55 | 4.5 | ATTTTTCAGATTTTT |
| -46 | 4.5 | ATTTTTTAAATTATT | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0418 | -53 | 5 | AATATTCAGAAATTT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP2299 | -112 | 4.3 | AATACTTTAAATATT |
| -103 | 4.1 | AATATTATAAATTAT | ||
| -94 | 4.5 | AATTATCTGACATTT | ||
|
Position: -138
Score: 4.6 Sequence: AATTATCAGAAAATA
Locus tag: SSP2329
|
||||
| SSP2329 | -138 | 4.6 | AATTATCAGAAAATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: tcyP | ||||
| Ortholog function: L-cystine uptake protein tcyP | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0368 | -72 | 4.3 | AATATTTTAAAATTA |
| -29 | 4.4 | TATATTCAAAAATTT | ||
| Staphylococcus capitis SK14 | STACA0001_1450 | -133 | 5.1 | ATTATTCAGAAAATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP2329 | -138 | 4.6 | AATTATCAGAAAATA |
|
Position: -193
Score: 4.3 Sequence: AATAATTTAACTATT
Locus tag: SSP2331
|
||||
| SSP2331 | -193 | 4.3 | AATAATTTAACTATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA0367 | ||||
| Ortholog function: putative NADPH-flavin oxidoreductase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0367 | -121 | 4.2 | AATATTTTTAAAAGT |
| Staphylococcus capitis SK14 | STACA0001_1449 | -145 | 4.8 | AAATATCTGAAAATT |
| Staphylococcus epidermidis ATCC 12228 | SE2355 | -114 | 5.1 | AATTATCTGAAAATT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0041 | -140 | 4.3 | AATATTTATATTATT |
| Staphylococcus haemolyticus JCSC1435 | SH2590 | -144 | 4.8 | AAATATCTGAAAATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP2331 | -193 | 4.3 | AATAATTTAACTATT |
|
Position: -314
Score: 4.7 Sequence: AAAATTTAAAAAATT
Position: -303
Score: 4.4 Sequence: AATTTTTAAAAAAAA
Position: -80
Score: 4.5 Sequence: TATTTTCAAATAATT
Locus tag: SSP2409
|
||||
| SSP2409 | -314 | 4.7 | AAAATTTAAAAAATT | |
| -303 | 4.4 | AATTTTTAAAAAAAA | ||
| -80 | 4.5 | TATTTTCAAATAATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cysH | ||||
| Ortholog function: 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase | ||||
| Staphylococcus capitis SK14 | STACA0001_1812 | -72 | 4.7 | ATTATTCTGACAATT |
| Staphylococcus epidermidis ATCC 12228 | SE2181 | -69 | 4.7 | ATTATTCTGACAATT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0058 | -80 | 4.6 | TATTTTCAGACAATT |
| Staphylococcus haemolyticus JCSC1435 | SH0413 | -69 | 4.7 | ATTATTCTGACAATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP2409 | -80 | 4.5 | TATTTTCAAATAATT |
|
Position: -127
Score: 4.6 Sequence: ACTTATCTGAAAATT
Locus tag: SSP2412
|
||||
| SSP2412 | -127 | 4.6 | ACTTATCTGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA0348 | ||||
| Ortholog function: putative transcriptional regulator | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0348 | -176 | 5.1 | ATTATTCAGAAAATT |
| Staphylococcus capitis SK14 | STACA0001_1417 | -209 | 4.9 | ACTTTTCTGAAAATT |
| -75 | 4.8 | AATTTTTAAAATAAT | ||
| Staphylococcus epidermidis ATCC 12228 | SE2378 | -210 | 5.1 | ATTTTTCTGAAAATT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0015 | -192 | 5.1 | AATTTTCAGAATAAT |
| -115 | 4.9 | AATTTTTTGAATTTT | ||
| Staphylococcus haemolyticus JCSC1435 | SH2634 | -279 | 4.9 | ACTTTTCTGAAAATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP2412 | -127 | 4.6 | ACTTATCTGAAAATT |