Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of CodY regulog to Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305

Reference regulog properties
Source regulog: CodY - Staphylococcaceae
Regulator type: Transcription factor
Regulator family: CodY
Regulation mode: repressor
Biological process: Amino acid metabolism
Effector: Branched-chain amino acids
Phylum: Firmicutes
Propagated regulon:
Target genome Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305
Orthologous TF(s) SSP1513
Regulated genes 64
Built upon 516 sites [see more]
Predicted regulatory interactions in Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305
Locus tag Position Score Sequence
Position: -230
Score: 4.8
Sequence: AATAATTAGAAAATT
Locus tag: SSP0012
SSP0012 -230 4.8 AATAATTAGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: metX
Ortholog function: homoserine-o-acetyltransferase
Staphylococcus aureus subsp. aureus N315 SA0011 -293 4.6 AGTAATCAGAAAATT
Staphylococcus capitis SK14 STACA0001_1363 -236 4.6 ATTAATTAGAAAATT
-227 4.6 AAAATTCAGACTATT
Staphylococcus epidermidis ATCC 12228 SE0011 -233 4.8 AATAATTAGAAAATT
-224 4.5 AAAATTTAGACTATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0012 -230 4.8 AATAATTAGAAAATT
-221 4 AAAATTATGATATTT
Position: -125
Score: 4.5
Sequence: CATATTTAAAAAATT
Locus tag: SSP0060
SSP0060 -125 4.5 CATATTTAAAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: capA
Ortholog function: capsular polysaccharide synthesis enzyme Cap5A
Staphylococcus carnosus subsp. carnosus TM300 Sca_2357 -118 4.1 AATAATTAGAAATTG
-81 4.3 AAAAATTTGAAATTT
Staphylococcus haemolyticus JCSC1435 SH0388 -367 4.6 TATATTTAAAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0060 -125 4.5 CATATTTAAAAAATT
Macrococcus caseolyticus JCSC5402 MCCL_0668 -103 4.2 AATTGTATAAAAAAT
-63 4.3 AAATTATTGAATATT
Position: -83
Score: 4.3
Sequence: AATTTTTATAAAATG
Position: -33
Score: 4
Sequence: ATTATCTAGAAAAAT
Locus tag: SSP0070
SSP0070 -83 4.3 AATTTTTATAAAATG
-33 4 ATTATCTAGAAAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: capM
Ortholog function: capsular polysaccharide synthesis enzyme Cap5M
Staphylococcus aureus subsp. aureus N315 SA0156 -32 4.1 ATTTTAATGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_2344 -118 4.1 AATAATTAGAAATTG
-81 4.3 AAAAATTTGAAATTT
Macrococcus caseolyticus JCSC5402 MCCL_0678 -103 4.2 AATTGTATAAAAAAT
-63 4.3 AAATTATTGAATATT
Position: -41
Score: 5.1
Sequence: AATTATCAGAAAATT
Locus tag: SSP0251
SSP0251 -41 5.1 AATTATCAGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cysD
Ortholog function: O-acetylhomoserine sulfhydrylase
Staphylococcus haemolyticus JCSC1435 SH0593 -37 5 AATTATCAGAATATT
-28 4.2 AATATTCTATTAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0251 -41 5.1 AATTATCAGAAAATT
-32 4.2 AAAATTTAGAAATTA
Position: -98
Score: 5.3
Sequence: AATTTTCTGAATATT
Locus tag: SSP0274
SSP0274 -98 5.3 AATTTTCTGAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA2396
Ortholog function: putative amino acid transporter
Staphylococcus aureus subsp. aureus N315 SA2396 -226 4.9 AATTGTTAGAAAATT
-103 4.8 ATTTTTCAGAATTTT
-94 4.2 AATTTTTAGACAAAA
Staphylococcus capitis SK14 STACA0001_0893 -295 4.3 AATTTGTAAAATATT
-160 4.8 ATTTTTCAGAATTTT
-151 4.2 AATTTTTAGACAAAA
Staphylococcus epidermidis ATCC 12228 SE2147 -165 4.8 ATTTTTCAGAATTTT
-156 4.2 AATTTTTAGACAAAA
Staphylococcus haemolyticus JCSC1435 SH0460 -114 5.1 AATTTTCAGAAATTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0274 -98 5.3 AATTTTCTGAATATT
-89 4.3 AATATTTAGATATAT
Position: -65
Score: 5.3
Sequence: AATATTCTGAAAATT
Locus tag: SSP0292
SSP0292 -65 5.3 AATATTCTGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA2357
Ortholog function: putative regulatory protein
Staphylococcus aureus subsp. aureus N315 SA2357 -188 4.2 CTTTATCTAAAAATT
-179 4.7 AAAATTCAGAATTTT
Staphylococcus capitis SK14 STACA0001_0926 -184 4.6 AATTATCTAAATTTT
-175 4.4 AATTTTCTGAAAACG
Staphylococcus epidermidis ATCC 12228 SE2129 -172 5.1 AATTTTCAGAAAAAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_2043 -282 4.7 CATATTTTGAAAATT
-69 4.5 TATTATCAGAATATT
Staphylococcus haemolyticus JCSC1435 SH0484 -156 5.3 AATATTCTGAAAATT
-147 4.1 AAAATTTAGAATTTG
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0292 -65 5.3 AATATTCTGAAAATT
-56 4.2 AAAATTAAGAAAATA
Position: -203
Score: 4.3
Sequence: AATATTCTGATAAAA
Locus tag: SSP0294
SSP0294 -203 4.3 AATATTCTGATAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: mtnE
Ortholog function: transaminase MtnE involved in methionine biosynthesis via salvage pathway
Staphylococcus aureus subsp. aureus N315 SA2347 -205 4.8 ATTAATCTGAAAATT
Staphylococcus capitis SK14 STACA0001_0934 -212 4.2 AAATGTTTGAAAATA
-93 4.6 ACTTATCTGAAAATT
Staphylococcus epidermidis ATCC 12228 SE2122 -61 4.4 TTATTTCAGAAAATT
-52 4.5 AAAATTCTAACTATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0010 -257 4.4 AAATGTCAGAATTTT
Staphylococcus haemolyticus JCSC1435 SH0492 -253 4.5 ATAAATCTGAAAATT
-244 4.4 AAAATTATAAATATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0294 -203 4.3 AATATTCTGATAAAA
Macrococcus caseolyticus JCSC5402 MCCL_0180 -222 4.8 AATATTCTGAATACT
Position: -218
Score: 4.6
Sequence: ATTTTTCAGAATATA
Locus tag: SSP0353
SSP0353 -218 4.6 ATTTTTCAGAATATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gabT
Ortholog function: 4-aminobutyrate aminotransferase
Staphylococcus aureus subsp. aureus N315 SA2397 -136 4 AAAATTCTTAATTAT
-127 4.5 AATTATCAGAATATA
Staphylococcus capitis SK14 STACA0001_0892 -175 4.7 AATATTTTAATAATT
-166 4.3 ATAATTCAGAAAATA
Staphylococcus epidermidis ATCC 12228 SE2148 -164 4.6 AATATTCTAAATTAT
-155 4.6 AATTATCAGAAAATA
Staphylococcus carnosus subsp. carnosus TM300 Sca_0283 -127 4.8 AAATATCTGAAAATT
Staphylococcus haemolyticus JCSC1435 SH0459 -145 4.6 ATTATTCAGAAAATA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0353 -218 4.6 ATTTTTCAGAATATA
Position: -109
Score: 4.8
Sequence: CATTTTCAGAATATT
Locus tag: SSP0431
SSP0431 -109 4.8 CATTTTCAGAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hisZ
Ortholog function: ATP phosphoribosyltransferase regulatory subunit
Staphylococcus aureus subsp. aureus N315 SA2472 -142 4.6 AATTTTCTGAAAAAG
Staphylococcus epidermidis ATCC 12228 SE0270 -115 5.1 AATTTTCTGAAAAAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0637 -125 4.2 ATTTTTATTAATATT
-116 5 AATATTCAGAATTTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0431 -109 4.8 CATTTTCAGAATATT
Position: -75
Score: 4.9
Sequence: TATTTTCAGAATATT
Locus tag: SSP0435
SSP0435 -75 4.9 TATTTTCAGAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA2261
Ortholog function: putative p-aminobenzoyl-glutamate transporter
Staphylococcus aureus subsp. aureus N315 SA2261 -75 4.9 CATTTTCTGAAAATT
Staphylococcus capitis SK14 STACA0001_1021 -78 5.1 AAATTTCAGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_2265 -83 4.8 AATTTTCAGAATTAT
Staphylococcus haemolyticus JCSC1435 SH0589 -75 5.1 AAATTTCTGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0435 -75 4.9 TATTTTCAGAATATT
Position: -165
Score: 4.9
Sequence: AATATTCTGAAAATA
Locus tag: SSP0436
SSP0436 -165 4.9 AATATTCTGAAAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA2260
Ortholog function: putative short chain dehydrogenase
Staphylococcus aureus subsp. aureus N315 SA2260 -174 4.9 AATTTTCAGAAAATG
Staphylococcus capitis SK14 STACA0001_1022 -218 5.1 AATTTTCTGAAATTT
Staphylococcus epidermidis ATCC 12228 SE2032 -218 4.6 ATTTTTCTGAAATAT
Staphylococcus haemolyticus JCSC1435 SH0590 -209 5.1 AATTTTCAGAAATTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0436 -165 4.9 AATATTCTGAAAATA
Position: 22
Score: 4.2
Sequence: AATTAATTGAATATT
Position: 34
Score: 4
Sequence: ATTATTCAGTAAACT
Locus tag: SSP0454
SSP0454 22 4.2 AATTAATTGAATATT
34 4 ATTATTCAGTAAACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: opuCD
Ortholog function: glycine betaine/carnitine/choline ABC transporter opuCD
Staphylococcus aureus subsp. aureus N315 SA2234 -76 4.1 ATTTGTTTAACAATT
Staphylococcus capitis SK14 STACA0001_1039 -145 4.3 CATATTCAAAATTTT
Staphylococcus epidermidis ATCC 12228 SE2015 -80 4.1 ATTTGTTTAACAATT
Staphylococcus epidermidis ATCC 12228 SE0225 -43 4 TATTTTTTAACAAAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1931 -517 4.7 ATTTGTCTGAATATT
Staphylococcus haemolyticus JCSC1435 SH0609 -134 4.1 ATTAATTAAAATTTT
Macrococcus caseolyticus JCSC5402 MCCL_1464 -93 4.5 TATTATCAAAAAATT
Position: -99
Score: 4.8
Sequence: ATTTATCAGAAAATT
Locus tag: SSP0460
SSP0460 -99 4.8 ATTTATCAGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA0165
Ortholog function: hypothetical protein
Staphylococcus aureus subsp. aureus N315 SA0165 -97 4.2 TTTTATCTAAATATT
-88 4.8 AATATTTAAAAAAAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0460 -99 4.8 ATTTATCAGAAAATT
Position: -81
Score: 5.2
Sequence: AATATTTAGAAAATT
Locus tag: SSP0585
SSP0585 -81 5.2 AATATTTAGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yocS
Ortholog function: Uncharacterized sodium-dependent transporter yocS
Staphylococcus aureus subsp. aureus N315 SA2112 -87 4.2 AATAATCTTAATTTT
-78 4.9 AATTTTCAGAAAAGT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0585 -90 4.5 AAAAATTAGAATATT
-81 5.2 AATATTTAGAAAATT
Position: -100
Score: 4.3
Sequence: ATAATTCAAAATAAT
Position: -88
Score: 4.4
Sequence: AATTGTTTAAATTTT
Position: -79
Score: 4.4
Sequence: AATTTTTTGAATTTA
Locus tag: SSP0591
SSP0591 -100 4.3 ATAATTCAAAATAAT
-88 4.4 AATTGTTTAAATTTT
-79 4.4 AATTTTTTGAATTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA2109
Ortholog function: probable amino-acid or metabolite transporter
Staphylococcus aureus subsp. aureus N315 SA2109 -183 4.7 ATTTTTTAGAAAAAT
Staphylococcus capitis SK14 STACA0001_1171 -181 5.1 AATTTTCAGAAAAAT
-101 4.1 AATTGTAAAAATTTT
Staphylococcus epidermidis ATCC 12228 SE1892 -98 4.4 AATTGTAAAAATATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1812 -468 4.4 ATTATACTGAAAATT
-414 4.4 AATATTCAAATAATA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0591 -88 4.4 AATTGTTTAAATTTT
-79 4.4 AATTTTTTGAATTTA
Position: -190
Score: 4.1
Sequence: TATTTTTATAAATTT
Position: -181
Score: 4.6
Sequence: AAATTTCAGAAAATG
Locus tag: SSP0752
SSP0752 -190 4.1 TATTTTTATAAATTT
-181 4.6 AAATTTCAGAAAATG
Supported by regulated orthologs from reference regulons
Ortholog gene name: hmrA
Ortholog function: N-acyl-L-amino acid amidohydrolase
Staphylococcus aureus subsp. aureus N315 SA1935 -143 4.5 AGTTATTAGAAAATT
Staphylococcus capitis SK14 STACA0001_0837 -235 4.6 AATTGTAAGAAAATT
Staphylococcus epidermidis ATCC 12228 SE1731 -113 4.6 AATTGTAAGAAAATT
-102 4.2 AATTGTGTAAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1636 -176 4.1 AATTTATTAAATTTT
Staphylococcus haemolyticus JCSC1435 SH0902 -179 4.7 AATTTTCAAAATTAT
-52 4.5 AATATCCAAAATATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0752 -190 4.1 TATTTTTATAAATTT
-181 4.6 AAATTTCAGAAAATG
Position: 31
Score: 5
Sequence: AATTGTCAGAAAATT
Locus tag: SSP0824
SSP0824 31 5 AATTGTCAGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ilvB
Ortholog function: acetolactate synthase large subunit
Staphylococcus aureus subsp. aureus N315 SA1859 -301 4.9 AATTTTTAGACAATT
-53 4.5 ATATTTCAGAATTTT
Staphylococcus capitis SK14 STACA0001_0525 -327 4.9 AATTGTTAGAAAATT
Staphylococcus epidermidis ATCC 12228 SE1655 -330 5.2 AATTTTTAGAAAATT
-321 4.1 AAAATTCTAAATTTA
Staphylococcus carnosus subsp. carnosus TM300 Sca_1560 -316 4.8 AATTTTAAAAAAATT
-307 4.3 AAAATTCTAATAAAT
Staphylococcus haemolyticus JCSC1435 SH0979 -321 4.4 AGTTGTTAGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0824 -323 4.2 AATTGACAGAAAAAT
-266 4 ATTTATCAAATTTTT
-258 4.7 AATTTTTAGATATTT
-249 4.1 ATATTTCAAACAAAT
Macrococcus caseolyticus JCSC5402 MCCL_0859 -266 5.2 AATTTTTAGAAAATT
-257 4.7 AAAATTTTAAATATT
Position: -258
Score: 4.7
Sequence: AATTTTTAGATATTT
Locus tag: SSP0825
SSP0825 -258 4.7 AATTTTTAGATATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ilvD
Ortholog function: dihydroxy-acid dehydratase
Staphylococcus aureus subsp. aureus N315 SA1858 -301 4.9 AATTTTTAGACAATT
-53 4.5 ATATTTCAGAATTTT
Staphylococcus capitis SK14 STACA0001_0526 -327 4.9 AATTGTTAGAAAATT
Staphylococcus epidermidis ATCC 12228 SE1654 -330 5.2 AATTTTTAGAAAATT
-321 4.1 AAAATTCTAAATTTA
Staphylococcus carnosus subsp. carnosus TM300 Sca_1559 -316 4.8 AATTTTAAAAAAATT
-307 4.3 AAAATTCTAATAAAT
Staphylococcus haemolyticus JCSC1435 SH0980 -321 4.4 AGTTGTTAGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0825 -323 4.2 AATTGACAGAAAAAT
-266 4 ATTTATCAAATTTTT
-258 4.7 AATTTTTAGATATTT
-249 4.1 ATATTTCAAACAAAT
Macrococcus caseolyticus JCSC5402 MCCL_0860 -266 5.2 AATTTTTAGAAAATT
-257 4.7 AAAATTTTAAATATT
Position: -63
Score: 4.2
Sequence: ATTATATTGAATATT
Locus tag: SSP0936
SSP0936 -63 4.2 ATTATATTGAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: artQ
Ortholog function: Arginine ABC transport system ArtQ
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0936 -63 4.2 ATTATATTGAATATT
Position: 13
Score: 3.9
Sequence: AAAATTTATATAAAT
Locus tag: SSP0938
SSP0938 13 3.9 AAAATTTATATAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: artM
Ortholog function: Arginine ABC transport system ATP-binding protein ArtM
Staphylococcus aureus subsp. aureus N315 SA1674 -167 4.3 ATAATTATGAATATT
Staphylococcus capitis SK14 STACA0001_0719 6 4.2 AAAATTATTAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1431 -83 5.1 AAATTTCAGAAAATT
-74 4 AAAATTTAAAAATTA
Staphylococcus haemolyticus JCSC1435 SH1105 -72 4 CTTTTTTAAAATTTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0938 -63 4.2 ATTATATTGAATATT
Macrococcus caseolyticus JCSC5402 MCCL_1583 -87 4.3 AATTATTAGAACATT
Position: -32
Score: 4
Sequence: ATTTTTTTGTATTTT
Locus tag: SSP0993
SSP0993 -32 4 ATTTTTTTGTATTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: opuCC
Ortholog function: glycine betaine/carnitine/choline ABC transporter opuCC
Staphylococcus capitis SK14 STACA0001_1038 -145 4.3 CATATTCAAAATTTT
Staphylococcus epidermidis ATCC 12228 SE2016 -80 4.1 ATTTGTTTAACAATT
Staphylococcus haemolyticus JCSC1435 SH0608 -134 4.1 ATTAATTAAAATTTT
Position: -119
Score: 4.9
Sequence: AATTTTCAAAATAAT
Locus tag: SSP1029
SSP1029 -119 4.9 AATTTTCAAAATAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: acuA
Ortholog function: hypothetical protein
Staphylococcus aureus subsp. aureus N315 SA1555 -114 4.1 ACATTTCTAATTATT
-105 4.6 ATTATTCAAAATTTT
-56 4.3 AATTTTCTATATAAT
Staphylococcus capitis SK14 STACA0001_0627 -110 4.3 ATTTTTCAAAAATCT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1339 -159 4.1 ATAATTATGATAATT
-150 4.2 ATAATTCTGATTTTT
Staphylococcus haemolyticus JCSC1435 SH1188 -92 4.9 AATTTTTAGATAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1029 -119 4.9 AATTTTCAAAATAAT
Macrococcus caseolyticus JCSC5402 MCCL_1410 -39 4.5 ATTTTTCAAAATATA
Position: -75
Score: 4.9
Sequence: ATTATTTTGAAAATT
Locus tag: SSP1030
SSP1030 -75 4.9 ATTATTTTGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: acsA
Ortholog function: acetyl-CoA synthetase
Staphylococcus aureus subsp. aureus N315 SA1554 -78 4.6 AAAATTTTGAATAAT
-69 4.1 AATAATTAGAAATGT
Staphylococcus capitis SK14 STACA0001_0626 -78 4.3 AGATTTTTGAAAAAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1338 -96 4.2 AAAAATCAGAATTAT
-87 4.1 AATTATCATAATTAT
Staphylococcus haemolyticus JCSC1435 SH1189 -87 4.9 AATTATCTAAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1030 -75 4.9 ATTATTTTGAAAATT
Macrococcus caseolyticus JCSC5402 MCCL_1409 -48 4.5 TATATTTTGAAAAAT
Position: -55
Score: 4.9
Sequence: TATTTTCTGAAAATT
Locus tag: SSP1040
SSP1040 -55 4.9 TATTTTCTGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA1544
Ortholog function: putative phosphoserine transaminase
Staphylococcus aureus subsp. aureus N315 SA1544 -54 5.4 AATTTTCAGAAAATT
Staphylococcus capitis SK14 STACA0001_0615 -53 5.2 AATATTCAGAATATT
Staphylococcus epidermidis ATCC 12228 SE1400 -54 5 AATATTCAGAATTTT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1329 -55 4.9 TATTTTCAGAATATT
Staphylococcus haemolyticus JCSC1435 SH1201 -55 5 AATTATCAGAATATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1040 -55 4.9 TATTTTCTGAAAATT
Position: -182
Score: 4.2
Sequence: AATTTTTAAAATTGT
Locus tag: SSP1203
SSP1203 -182 4.2 AATTTTTAAAATTGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sodA
Ortholog function: superoxide dismutase SodA
Staphylococcus aureus subsp. aureus N315 SA1382 -140 4.1 AAATGTTTAATTATT
Staphylococcus capitis SK14 STACA0001_1791 -219 4.3 TATTTTCAAAAAACT
-184 4.2 AATGGTCTGAAAAAT
Staphylococcus epidermidis ATCC 12228 SE1240 -101 4.4 AATAATTTAATAATT
Staphylococcus haemolyticus JCSC1435 SH1363 -248 4.3 AATTATTTAAAAATA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1203 -182 4.2 AATTTTTAAAATTGT
Position: -67
Score: 4.6
Sequence: AATATTTTGATAAAT
Locus tag: SSP1221
SSP1221 -67 4.6 AATATTTTGATAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA1364
Ortholog function: putative sulfurtransferase
Staphylococcus aureus subsp. aureus N315 SA1364 -66 4.8 AATATTTTGATAATT
Staphylococcus capitis SK14 STACA0001_1771 -66 4.6 AATATTTTGATAAAT
Staphylococcus epidermidis ATCC 12228 SE1218 -66 4.6 AATATTTTGATAAAT
Staphylococcus haemolyticus JCSC1435 SH1382 -66 4.3 AAAATTTTGATAAAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1221 -67 4.6 AATATTTTGATAAAT
Position: -121
Score: 4.6
Sequence: ATTTATCAAAATATT
Locus tag: SSP1222
SSP1222 -121 4.6 ATTTATCAAAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA1363
Ortholog function: Lipoate-protein ligase A
Staphylococcus aureus subsp. aureus N315 SA1363 -106 4.8 AATTATCAAAATATT
Staphylococcus capitis SK14 STACA0001_1770 -109 4.6 ATTTATCAAAATATT
Staphylococcus epidermidis ATCC 12228 SE1217 -108 4.6 ATTTATCAAAATATT
Staphylococcus haemolyticus JCSC1435 SH1383 -100 4.3 ATTTATCAAAATTTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1222 -121 4.6 ATTTATCAAAATATT
Position: -113
Score: 4.6
Sequence: ATTTTTATGAATATT
Locus tag: SSP1278
SSP1278 -113 4.6 ATTTTTATGAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: aroC
Ortholog function: chorismate synthase
Staphylococcus aureus subsp. aureus N315 SA1299 -150 4.6 AATATTAAGATAATT
-141 4.2 ATAATTCTGACATTT
Staphylococcus epidermidis ATCC 12228 SE1155 -138 4 TCTTTTTTAAATATT
Staphylococcus haemolyticus JCSC1435 SH1446 -124 4.7 AATTATTAAAATATT
-115 4.6 AATATTCTAATAAAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1278 -113 4.6 ATTTTTATGAATATT
Position: -26
Score: 4.1
Sequence: AATTAACAGATTATT
Position: 19
Score: 4
Sequence: ATAAATCTAATAATT
Locus tag: SSP1279
SSP1279 -26 4.1 AATTAACAGATTATT
19 4 ATAAATCTAATAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: aroB
Ortholog function: 3-dehydroquinate synthase
Staphylococcus aureus subsp. aureus N315 SA1298 -150 4.6 AATATTAAGATAATT
-141 4.2 ATAATTCTGACATTT
Staphylococcus epidermidis ATCC 12228 SE1154 -138 4 TCTTTTTTAAATATT
Staphylococcus haemolyticus JCSC1435 SH1447 -124 4.7 AATTATTAAAATATT
-115 4.6 AATATTCTAATAAAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1279 -113 4.6 ATTTTTATGAATATT
Position: -95
Score: 4.5
Sequence: ATATTTTTAAATATT
Position: -86
Score: 5
Sequence: AATATTCTGAAATTT
Locus tag: SSP1343
SSP1343 -95 4.5 ATATTTTTAAATATT
-86 5 AATATTCTGAAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: braB
Ortholog function: branched-chain amino acid transport system
Staphylococcus capitis SK14 STACA0001_1652 -85 4.7 AATTTTCTGAAATTA
Staphylococcus epidermidis ATCC 12228 SE1090 -87 5.1 AATTTTCTGAAATTT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1051 -96 4.7 AATTTTCAGAAAGTT
Staphylococcus haemolyticus JCSC1435 SH1502 -87 4.2 AATTTTCTGAAATCA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1343 -95 4.5 ATATTTTTAAATATT
-86 5 AATATTCTGAAATTT
Macrococcus caseolyticus JCSC5402 MCCL_1059 -84 4.9 AATATTCAGAAAATA
Position: -350
Score: 4.5
Sequence: ATTTTTCAGTAAATT
Position: -341
Score: 4.3
Sequence: TAAATTTAAAAAATT
Locus tag: SSP1357
SSP1357 -350 4.5 ATTTTTCAGTAAATT
-341 4.3 TAAATTTAAAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: lysC
Ortholog function: aspartokinase II
Staphylococcus carnosus subsp. carnosus TM300 Sca_1037 -340 4.3 AAATTTCTAAAAATC
Staphylococcus haemolyticus JCSC1435 SH1518 -344 4.1 ATTTTTCAGTCTATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1357 -350 4.5 ATTTTTCAGTAAATT
-341 4.3 TAAATTTAAAAAATT
Position: -36
Score: 4.8
Sequence: ACTATTCTGAAAATT
Locus tag: SSP1387
SSP1387 -36 4.8 ACTATTCTGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: tyrA
Ortholog function: prephenate dehydrogenase
Staphylococcus aureus subsp. aureus N315 SA1197 -34 5.1 ATTATTCTGAAAATT
Staphylococcus capitis SK14 STACA0001_1611 -35 4.8 ACTATTCTGAAAATT
Staphylococcus epidermidis ATCC 12228 SE1047 -251 4.4 AATTATCTGATTTTT
-242 4.6 ATTTTTCTAATTATT
-35 4.4 GTTATTCTGAAAATT
Staphylococcus haemolyticus JCSC1435 SH1544 -35 4.8 CATATTCTGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1387 -36 4.8 ACTATTCTGAAAATT
Position: -129
Score: 4.4
Sequence: AAATGTTTAAATATT
Position: -120
Score: 4.1
Sequence: AATATTGCGAAAATT
Locus tag: SSP1432
SSP1432 -129 4.4 AAATGTTTAAATATT
-120 4.1 AATATTGCGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: katA
Ortholog function: catalase
Staphylococcus aureus subsp. aureus N315 SA1170 -111 4.1 AAAAATTAAAATTTT
-102 4.7 AATTTTCTGATTTTT
Staphylococcus capitis SK14 STACA0001_1577 -131 4.7 AATATTTAAAAATTT
-121 5.1 AATTTTCTGAAATTT
Staphylococcus epidermidis ATCC 12228 SE1016 -142 4.1 AATTGTTAAATTTTT
-133 4.6 ATTTTTCTGATATTT
Staphylococcus carnosus subsp. carnosus TM300 Sca_2336 -28 4.1 ATTATTCTAAATAAG
Staphylococcus haemolyticus JCSC1435 SH1573 -123 4.4 AAAATTTTAAATTTT
-114 5.1 AATTTTCTGAAATTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1432 -129 4.4 AAATGTTTAAATATT
Position: -111
Score: 4.4
Sequence: AATATTTAAACATTT
Locus tag: SSP1433
SSP1433 -111 4.4 AATATTTAAACATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: rocC
Ortholog function: amino acid permease
Staphylococcus aureus subsp. aureus N315 SA1169 -110 4.7 AAAAATCAGAAAATT
-101 4.1 AAAATTTTAATTTTT
Staphylococcus capitis SK14 STACA0001_1576 -112 5.1 AAATTTCAGAAAATT
-102 4.7 AAATTTTTAAATATT
Staphylococcus epidermidis ATCC 12228 SE1015 -112 4.6 AAATATCAGAAAAAT
-103 4.1 AAAAATTTAACAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0975 -121 4.3 TTTTTTCAGAATTTT
-112 4.7 AATTTTTTAAATTTT
Staphylococcus haemolyticus JCSC1435 SH1574 -114 5.1 AAATTTCAGAAAATT
-105 4.4 AAAATTTAAAATTTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1433 -111 4.4 AATATTTAAACATTT
Macrococcus caseolyticus JCSC5402 MCCL_0990 -56 4.4 AATTTTCTTAATTAT
Position: -168
Score: 4.7
Sequence: AAAAATCAGAAAATT
Locus tag: SSP1438
SSP1438 -168 4.7 AAAAATCAGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hom
Ortholog function: homoserine dehydrogenase
Staphylococcus aureus subsp. aureus N315 SA1164 -170 4.7 AAAAATCAGAAAATT
-118 4.6 TATATTTTGAATATT
Staphylococcus capitis SK14 STACA0001_1571 -170 4.7 AAAAATCAGAAAATT
-91 4.3 AAAATTAAGAATAAT
Staphylococcus epidermidis ATCC 12228 SE1009 -170 4.7 AAAAATCAGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0970 -127 4.2 AAATTTCAACATATT
-109 4.4 AATTTTTTGAACTTT
Staphylococcus haemolyticus JCSC1435 SH1579 -178 4.7 AAAAATCAGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1438 -168 4.7 AAAAATCAGAAAATT
Position: -35
Score: 4.7
Sequence: AATTTTCTGATTTTT
Locus tag: SSP1439
SSP1439 -35 4.7 AATTTTCTGATTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: thrA
Ortholog function: aspartokinase III
Staphylococcus aureus subsp. aureus N315 SA1163 -87 4.6 AATATTCAAAATATA
-35 4.7 AATTTTCTGATTTTT
Staphylococcus capitis SK14 STACA0001_1570 -33 4.7 AATTTTCTGATTTTT
Staphylococcus epidermidis ATCC 12228 SE1008 -33 4.7 AATTTTCTGATTTTT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0969 -97 4.4 AAAGTTCAAAAAATT
-79 4.2 AATATGTTGAAATTT
Staphylococcus haemolyticus JCSC1435 SH1580 -35 4.7 AATTTTCTGATTTTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1439 -35 4.7 AATTTTCTGATTTTT
Position: -157
Score: 4.9
Sequence: AATTTTCTAATAATT
Position: -56
Score: 4.4
Sequence: ATTAATCTGATTATT
Locus tag: SSP1452
SSP1452 -157 4.9 AATTTTCTAATAATT
-56 4.4 ATTAATCTGATTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glnR
Ortholog function: HTH-type transcriptional regulator GlnR
Staphylococcus aureus subsp. aureus N315 SA1149 -187 4.4 ATTTATCAGATTATT
-178 4.2 ATTATTTTTAAAAAT
Staphylococcus capitis SK14 STACA0001_1553 -202 4.3 TTTTGTCAGAAAATT
-191 4.1 AATTATAAAATTATT
-150 4.2 ATTAATTAAAAATTT
Staphylococcus epidermidis ATCC 12228 SE0986 -194 4.8 AAATGTCTGAAAATT
-185 4.7 AAAATTTTAAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0958 -157 4.8 AATTTACAGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1452 -179 4.2 ATTTTTTTGAATAAA
-157 4.9 AATTTTCTAATAATT
-56 4.4 ATTAATCTGATTATT
Position: -104
Score: 4.3
Sequence: ATAATTCAAAATAAT
Locus tag: SSP1542
SSP1542 -104 4.3 ATAATTCAAAATAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: aur
Ortholog function: zinc metalloproteinase aureolysin
Staphylococcus aureus subsp. aureus N315 SA2430 -68 4.6 ACTTTTCTGAAAAAT
Staphylococcus capitis SK14 STACA0001_1850 -30 4.2 CTTTTTCAAAAATTT
7 4.4 ATTTTTCAAAATATG
Staphylococcus epidermidis ATCC 12228 SE2219 -69 4.9 ACTTTTCAGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1542 -104 4.3 ATAATTCAAAATAAT
Position: -38
Score: 4.7
Sequence: ACTTTTTAGAAAATT
Locus tag: SSP1675
SSP1675 -38 4.7 ACTTTTTAGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pycA
Ortholog function: pyruvate carboxylase
Staphylococcus aureus subsp. aureus N315 SA0963 -41 4.6 ATTAGTTAGAAAATT
Staphylococcus capitis SK14 STACA0001_2249 -42 4.6 ATTAGTTAGAAAATT
-33 4.4 AAAATTCAAAAAATA
Staphylococcus epidermidis ATCC 12228 SE0813 -40 4.1 TATTATCTAATTATT
-31 4.9 ATTATTTAGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0740 -34 4.6 AAAATTCAAATAATT
Staphylococcus haemolyticus JCSC1435 SH1838 -41 4.5 ATTAGTTAGAATATT
-32 4 AATATTCAAACTTTA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1675 -38 4.7 ACTTTTTAGAAAATT
-29 4.1 AAAATTCAAAATTTA
Position: -186
Score: 4.6
Sequence: AATATTCAGACTTTT
Position: -92
Score: 4.5
Sequence: AAATTTATAAAAATT
Locus tag: SSP1755
SSP1755 -186 4.6 AATATTCAGACTTTT
-92 4.5 AAATTTATAAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: comK
Ortholog function: competence transcription factor
Staphylococcus aureus subsp. aureus N315 SA0882 -147 4.9 AATATTCTGACTATT
Staphylococcus capitis SK14 STACA0001_0106 -151 4.7 AATATTCTGACATTT
Staphylococcus epidermidis ATCC 12228 SE0731 -147 4.7 AATATTCTGACATTT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0642 -145 4.6 AATATTCTGACTTTT
-136 4.1 ACTTTTTAAAAAATA
Staphylococcus haemolyticus JCSC1435 SH1926 -148 4.6 AATATTCTGACTTTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1755 -186 4.6 AATATTCAGACTTTT
-92 4.5 AAATTTATAAAAATT
Macrococcus caseolyticus JCSC5402 MCCL_1546 -195 4.8 ATAATTCTGAAAATT
-186 4.4 AAAATTTAAATTATT
-86 4.7 AAATTTCTTAAAATT
Position: -174
Score: 4.5
Sequence: AATTTTTATAAATTT
Position: -80
Score: 4.6
Sequence: AAAAGTCTGAATATT
Locus tag: SSP1756
SSP1756 -174 4.5 AATTTTTATAAATTT
-80 4.6 AAAAGTCTGAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA0883
Ortholog function: hypothetical protein
Staphylococcus aureus subsp. aureus N315 SA0883 -77 4.9 AATAGTCAGAATATT
Staphylococcus capitis SK14 STACA0001_0107 -83 4.7 AAATGTCAGAATATT
Staphylococcus epidermidis ATCC 12228 SE0729 -82 4.7 AAATGTCAGAATATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0643 -178 4.2 AATTATAAAAATAAT
-91 4.1 TATTTTTTAAAAAGT
-82 4.6 AAAAGTCAGAATATT
Staphylococcus haemolyticus JCSC1435 SH1925 -80 4.6 AAAAGTCAGAATATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1756 -174 4.5 AATTTTTATAAATTT
-80 4.6 AAAAGTCTGAATATT
Position: -56
Score: 4.8
Sequence: ATATTTCTGAATATT
Locus tag: SSP1794
SSP1794 -56 4.8 ATATTTCTGAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: oppB
Ortholog function: oligopeptide ABC transporter permease protein OppB
Staphylococcus aureus subsp. aureus N315 SA0845 -66 4.7 AGATTTCAGAAAATT
Staphylococcus capitis SK14 STACA0001_0146 -36 4.2 AATATACATAATATT
-27 4.6 AATATTCTGAAAAAA
Staphylococcus epidermidis ATCC 12228 SE0680 -63 4.9 ATATTTCTGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0588 -113 5.2 AATATTCTAAAAATT
-65 4.2 AATATTAAAATATTT
-56 4.9 ATATTTCTGAAAATT
Staphylococcus haemolyticus JCSC1435 SH1970 -116 4.7 AATTTTGTGAAAATT
-60 4.9 ATATTTCTGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1794 -56 4.8 ATATTTCTGAATATT
Macrococcus caseolyticus JCSC5402 MCCL_0605 -186 4.8 AATTTTTAAAAAAAT
-132 4.8 AATCTTCTGAAAATT
Position: -109
Score: 4.6
Sequence: AATATTCTCAATATT
Locus tag: SSP1991
SSP1991 -109 4.6 AATATTCTCAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: tppB
Ortholog function: di-tripepride ABC transporter
Staphylococcus aureus subsp. aureus N315 SA0682 -112 4.6 AATATTCTCAATATT
-103 4.1 AATATTTTTATTTTT
Staphylococcus capitis SK14 STACA0001_0301 -124 4.3 AATTGACTGAATATT
-115 4.5 AATATTCATATTATT
-98 4.8 TATTTTTTGAAAATT
Staphylococcus epidermidis ATCC 12228 SE0509 -107 4 CTTTTTTTAAATTTT
-98 5.2 AATTTTTTGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0374 -114 5.3 AATATTCTGAAAATT
-88 4.5 TATTTTAAGAAAATT
Staphylococcus haemolyticus JCSC1435 SH2166 -102 5 AAATTTCTAAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1991 -118 4.1 AAATAACAGAATATT
-109 4.6 AATATTCTCAATATT
Macrococcus caseolyticus JCSC5402 MCCL_0478 -117 4.6 AACTTTTTGAAAATT
-36 5.3 AATTTTCAGAATATT
Position: -190
Score: 5.1
Sequence: AATTTTCAGAAAAAT
Locus tag: SSP2051
SSP2051 -190 5.1 AATTTTCAGAAAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA0626
Ortholog function: hypothetical protein
Staphylococcus aureus subsp. aureus N315 SA0626 -195 4.5 ATATTTTTGAAAAAT
Staphylococcus capitis SK14 STACA0001_0358 -200 4.6 ATTAATTAGAAAATT
-142 4.3 AATTTTAAGTAAATT
-98 4.2 ATAATTTTGAAAATA
Staphylococcus haemolyticus JCSC1435 SH2222 -200 4.1 TTTATTTAGAATTTT
-191 4.6 AATTTTCAGATAATA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2051 -190 5.1 AATTTTCAGAAAAAT
Position: -38
Score: 5.1
Sequence: ATTTTTCTGAAAATT
Locus tag: SSP2052
SSP2052 -38 5.1 ATTTTTCTGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yxjH
Ortholog function: putative methionine synthase II
Staphylococcus haemolyticus JCSC1435 SH2223 -45 4.6 TATTATCTGAAAATT
-36 4.1 AAAATTCTAAATAAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2052 -38 5.1 ATTTTTCTGAAAATT
Position: -166
Score: 4.8
Sequence: AAATTTCAGAATTTT
Locus tag: SSP2074
SSP2074 -166 4.8 AAATTTCAGAATTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA0601
Ortholog function: hypothetical protein
Staphylococcus aureus subsp. aureus N315 SA0601 -400 5 AAAATTCAGAATATT
-391 4.1 AATATTTTTAATTAT
Staphylococcus capitis SK14 STACA0001_0382 -211 5 AAAATTCAGAATATT
Staphylococcus epidermidis ATCC 12228 SE0420 -206 5 AAAATTCAGAATATT
-197 4.1 AATATTTAAATTTAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0294 -120 4.8 AATTTTCAGAATTAT
Staphylococcus haemolyticus JCSC1435 SH2248 -172 5 AAAATTCAGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2074 -166 4.8 AAATTTCAGAATTTT
Position: -86
Score: 5.2
Sequence: AATTTTTTGAAAATT
Locus tag: SSP2163
SSP2163 -86 5.2 AATTTTTTGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ilvE
Ortholog function: branched-chain amino acid aminotransferase
Staphylococcus aureus subsp. aureus N315 SA0512 -92 5.2 AATTTTTAGAAAATT
Staphylococcus capitis SK14 STACA0001_0476 -101 4.4 TTTATTTTGAATATT
-92 4.7 AATATTTAGAAAACT
Staphylococcus epidermidis ATCC 12228 SE0318 -99 4.1 TCTATTTTGAATATT
-90 5.2 AATATTTAGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0215 -101 4.5 ATTTTTTTAAATTTT
-92 4.8 AATTTTCTAAAAACT
Staphylococcus haemolyticus JCSC1435 SH2449 -91 5.2 AATTTTTAGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2163 -86 5.2 AATTTTTTGAAAATT
Macrococcus caseolyticus JCSC5402 MCCL_1855 -85 4.8 AATTTTCTAAAAACT
Position: -126
Score: 4.1
Sequence: AATTTTTTAATATTA
Locus tag: SSP2257
SSP2257 -126 4.1 AATTTTTTAATATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: capH
Ortholog function: capsular polysaccharide synthesis enzyme Cap5H
Staphylococcus aureus subsp. aureus N315 SA0151 -32 4.1 ATTTTAATGAAAATT
Position: -34
Score: 5
Sequence: AATTTTCAGAATTTT
Locus tag: SSP2284
SSP2284 -34 5 AATTTTCAGAATTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gltB
Ortholog function: glutamate synthase large subunit
Staphylococcus aureus subsp. aureus N315 SA0430 -35 4.3 TAATATCAGAATATT
-26 4.4 AATATTCTAAAAAAG
Staphylococcus capitis SK14 STACA0001_1494 -174 4.6 AAAATTCTAAAATTT
-36 5 AATTGTCAGAAAATT
Staphylococcus epidermidis ATCC 12228 SE2312 -35 5 AATTGTCAGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0105 -117 4.5 AATAATTAGAATAAT
-43 4.7 AAAAATCTGAAAATT
Staphylococcus haemolyticus JCSC1435 SH2540 -34 5.4 AATTTTCTGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2284 -34 5 AATTTTCAGAATTTT
Position: -118
Score: 5
Sequence: AAAATTCTGAAAATT
Locus tag: SSP2285
SSP2285 -118 5 AAAATTCTGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gltC
Ortholog function: transcription activator of glutamate synthase operon
Staphylococcus aureus subsp. aureus N315 SA0429 -169 4.4 CTTTTTTAGAATATT
-160 4.3 AATATTCTGATATTA
Staphylococcus capitis SK14 STACA0001_1493 -179 5 AATTTTCTGACAATT
-41 4.6 AAATTTTAGAATTTT
Staphylococcus epidermidis ATCC 12228 SE2313 -171 5 AATTTTCTGACAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0104 -113 4.7 AATTTTCAGATTTTT
-39 4.5 ATTATTCTAATTATT
Staphylococcus haemolyticus JCSC1435 SH2541 -138 5.4 AATTTTCAGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2285 -118 5 AAAATTCTGAAAATT
Position: -94
Score: 4.5
Sequence: AATTATCTGACATTT
Locus tag: SSP2299
SSP2299 -94 4.5 AATTATCTGACATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: brnQ2
Ortholog function: branched-chain amino acid transport system
Staphylococcus aureus subsp. aureus N315 SA0294 -55 4.5 ATTTTTCAGATTTTT
-46 4.5 ATTTTTTAAATTATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0418 -53 5 AATATTCAGAAATTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2299 -112 4.3 AATACTTTAAATATT
-103 4.1 AATATTATAAATTAT
-94 4.5 AATTATCTGACATTT
Position: -138
Score: 4.6
Sequence: AATTATCAGAAAATA
Locus tag: SSP2329
SSP2329 -138 4.6 AATTATCAGAAAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: tcyP
Ortholog function: L-cystine uptake protein tcyP
Staphylococcus aureus subsp. aureus N315 SA0368 -72 4.3 AATATTTTAAAATTA
-29 4.4 TATATTCAAAAATTT
Staphylococcus capitis SK14 STACA0001_1450 -133 5.1 ATTATTCAGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2329 -138 4.6 AATTATCAGAAAATA
Position: -193
Score: 4.3
Sequence: AATAATTTAACTATT
Locus tag: SSP2331
SSP2331 -193 4.3 AATAATTTAACTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA0367
Ortholog function: putative NADPH-flavin oxidoreductase
Staphylococcus aureus subsp. aureus N315 SA0367 -121 4.2 AATATTTTTAAAAGT
Staphylococcus capitis SK14 STACA0001_1449 -145 4.8 AAATATCTGAAAATT
Staphylococcus epidermidis ATCC 12228 SE2355 -114 5.1 AATTATCTGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0041 -140 4.3 AATATTTATATTATT
Staphylococcus haemolyticus JCSC1435 SH2590 -144 4.8 AAATATCTGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2331 -193 4.3 AATAATTTAACTATT
Position: -314
Score: 4.7
Sequence: AAAATTTAAAAAATT
Position: -303
Score: 4.4
Sequence: AATTTTTAAAAAAAA
Position: -80
Score: 4.5
Sequence: TATTTTCAAATAATT
Locus tag: SSP2409
SSP2409 -314 4.7 AAAATTTAAAAAATT
-303 4.4 AATTTTTAAAAAAAA
-80 4.5 TATTTTCAAATAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cysH
Ortholog function: 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase
Staphylococcus capitis SK14 STACA0001_1812 -72 4.7 ATTATTCTGACAATT
Staphylococcus epidermidis ATCC 12228 SE2181 -69 4.7 ATTATTCTGACAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0058 -80 4.6 TATTTTCAGACAATT
Staphylococcus haemolyticus JCSC1435 SH0413 -69 4.7 ATTATTCTGACAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2409 -80 4.5 TATTTTCAAATAATT
Position: -127
Score: 4.6
Sequence: ACTTATCTGAAAATT
Locus tag: SSP2412
SSP2412 -127 4.6 ACTTATCTGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA0348
Ortholog function: putative transcriptional regulator
Staphylococcus aureus subsp. aureus N315 SA0348 -176 5.1 ATTATTCAGAAAATT
Staphylococcus capitis SK14 STACA0001_1417 -209 4.9 ACTTTTCTGAAAATT
-75 4.8 AATTTTTAAAATAAT
Staphylococcus epidermidis ATCC 12228 SE2378 -210 5.1 ATTTTTCTGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0015 -192 5.1 AATTTTCAGAATAAT
-115 4.9 AATTTTTTGAATTTT
Staphylococcus haemolyticus JCSC1435 SH2634 -279 4.9 ACTTTTCTGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2412 -127 4.6 ACTTATCTGAAAATT
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