Propagation of CcpA regulog to Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305
| Source regulog: | CcpA - Staphylococcaceae |
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | repressor (activator) |
| Biological process: | Carbon catabolism |
| Effector: | HPr, phosphocarrier protein; Fructose-1,6-diphosphate |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 |
| Orthologous TF(s) | SSP1027 |
| Regulated genes | 67 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -56
Score: 4.3 Sequence: ATGTAAGCGTATACTC
Locus tag: SSP0008
|
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| SSP0008 | -56 | 4.3 | ATGTAAGCGTATACTC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hutH | ||||
| Ortholog function: histidine ammonia-lyase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0008 | -59 | 4.6 | ATGAAAACGTATACTT |
| Staphylococcus capitis SK14 | STACA0001_1368 | -57 | 4.6 | ATGAAAACGTATACTT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_2466 | -58 | 4.7 | ATGTAAGCGTATACTT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0008 | -56 | 4.3 | ATGTAAGCGTATACTC |
|
Position: -65
Score: 5 Sequence: TTGTAAGCGCTTACTA
Locus tag: SSP0114
|
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| SSP0114 | -65 | 5 | TTGTAAGCGCTTACTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SSP0114 | ||||
| Ortholog function: putative oxidoreductase | ||||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0114 | -65 | 5 | TTGTAAGCGCTTACTA |
|
Position: -28
Score: 5 Sequence: ATGAAATCGTTTACAA
Locus tag: SSP0178
|
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| SSP0178 | -28 | 5 | ATGAAATCGTTTACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glpK | ||||
| Ortholog function: glycerate kinase | ||||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0178 | -28 | 5 | ATGAAATCGTTTACAA |
|
Position: -297
Score: 4.8 Sequence: AAGAAAACGATTTCAT
Position: -79
Score: 4.9 Sequence: ATGAATGCGTTTACAA
Locus tag: SSP0230
|
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| SSP0230 | -297 | 4.8 | AAGAAAACGATTTCAT | |
| -79 | 4.9 | ATGAATGCGTTTACAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SSP0230 | ||||
| Ortholog function: L-lactate permease paralog | ||||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0230 | -79 | 4.9 | ATGAATGCGTTTACAA |
|
Position: -330
Score: 4.9 Sequence: TTGTAAACGCATTCAT
Position: -112
Score: 4.8 Sequence: ATGAAATCGTTTTCTT
Locus tag: SSP0231
|
||||
| SSP0231 | -330 | 4.9 | TTGTAAACGCATTCAT | |
| -112 | 4.8 | ATGAAATCGTTTTCTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: csbX | ||||
| Ortholog function: putative alpha-ketoglutarate permease | ||||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_2416 | -40 | 4.6 | ATGAAAACGTTTTCGT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0231 | -112 | 4.8 | ATGAAATCGTTTTCTT |
|
Position: -56
Score: 5.2 Sequence: TTGTAAACGTTTACAA
Locus tag: SSP0236
|
||||
| SSP0236 | -56 | 5.2 | TTGTAAACGTTTACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SH0372 | ||||
| Ortholog function: hypothetical Zn-dependent hydrolase | ||||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_2373 | -60 | 5.3 | TTGTAAGCGTTTACAT |
| Staphylococcus haemolyticus JCSC1435 | SH0372 | -29 | 5.3 | ATGAAAACGTTTTCAT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0236 | -56 | 5.2 | TTGTAAACGTTTACAA |
|
Position: -40
Score: 5 Sequence: TAGAAAGCGTTTACAA
Locus tag: SSP0245
|
||||
| SSP0245 | -40 | 5 | TAGAAAGCGTTTACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SSP0245 | ||||
| Ortholog function: putative truncated transcriptional antiterminator | ||||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0245 | -158 | 4 | TATAAAACGATATCAT |
| -40 | 5 | TAGAAAGCGTTTACAA | ||
|
Position: -101
Score: 4.7 Sequence: ATGTAAGCGATTGCAT
Locus tag: SSP0311
|
||||
| SSP0311 | -101 | 4.7 | ATGTAAGCGATTGCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rocA | ||||
| Ortholog function: 1-pyrroline-5-carboxylate dehydrogenase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2341 | -112 | 4.7 | ATGAAAGCGATTGCAA |
| Staphylococcus capitis SK14 | STACA0001_0943 | -128 | 4.7 | ATGTAAGCGATTGCAA |
| Staphylococcus epidermidis ATCC 12228 | SE2116 | -149 | 4.9 | ATGTAAGCGTTTGCAA |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0564 | -49 | 4.8 | ATGTAAGGGCTTTCTT |
| Staphylococcus haemolyticus JCSC1435 | SH0500 | -128 | 4.7 | ATGTAAGCGATTGCAA |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0311 | -101 | 4.7 | ATGTAAGCGATTGCAT |
| Macrococcus caseolyticus JCSC5402 | MCCL_0582 | -44 | 4.7 | ATGTAAGGGTTTTCTA |
|
Position: -57
Score: 4.3 Sequence: ATGAAAGGCTTTGCAT
Locus tag: SSP0327
|
||||
| SSP0327 | -57 | 4.3 | ATGAAAGGCTTTGCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: drp35 | ||||
| Ortholog function: lactonase Drp35 | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2480 | -84 | 4.6 | ATGAAACCGTTATCAT |
| Staphylococcus haemolyticus JCSC1435 | SH0300 | -97 | 5 | TTGAAAACGATTACAT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0327 | -57 | 4.3 | ATGAAAGGCTTTGCAT |
|
Position: -157
Score: 4.6 Sequence: TTGTAAACGCTACCAT
Locus tag: SSP0374
|
||||
| SSP0374 | -157 | 4.6 | TTGTAAACGCTACCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nanK | ||||
| Ortholog function: predicted N-acetyl-D-mannosamine kinase, ROK family | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0305 | -109 | 4.9 | TTGTAAACGCTATCAT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_2390 | -152 | 4.9 | TTGTAAACGCTATCAT |
| Staphylococcus haemolyticus JCSC1435 | SH0281 | -150 | 4.9 | TTGTAAACGCTATCAT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0374 | -157 | 4.6 | TTGTAAACGCTACCAT |
|
Position: -182
Score: 4.6 Sequence: ATGGTAGCGTTTACAA
Locus tag: SSP0375
|
||||
| SSP0375 | -182 | 4.6 | ATGGTAGCGTTTACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nanA | ||||
| Ortholog function: N-acetylneuraminate lyase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0304 | -64 | 4.9 | ATGATAGCGTTTACAA |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_2389 | -109 | 4.9 | ATGATAGCGTTTACAA |
| Staphylococcus haemolyticus JCSC1435 | SH0282 | -108 | 4.9 | ATGATAGCGTTTACAA |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0375 | -182 | 4.6 | ATGGTAGCGTTTACAA |
|
Position: -86
Score: 5.1 Sequence: TTGTAAGCGATTTCAT
Locus tag: SSP0401
|
||||
| SSP0401 | -86 | 5.1 | TTGTAAGCGATTTCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gudP | ||||
| Ortholog function: glucarate transporter | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2300 | -148 | 4.7 | TTGTAAACGCTTTCCA |
| Staphylococcus capitis SK14 | STACA0001_1003 | -166 | 4 | TTGTAACCGTTTTCGC |
| Staphylococcus epidermidis ATCC 12228 | SE2056 | -164 | 4.6 | TTGTAACCGTTTACAC |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1960 | -94 | 4.7 | TTGTAAACGATTTCTA |
| Staphylococcus haemolyticus JCSC1435 | SH0566 | -241 | 5 | TTGAAAACGATTTCAA |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0401 | -86 | 5.1 | TTGTAAGCGATTTCAT |
| Macrococcus caseolyticus JCSC5402 | MCCL_1800 | -82 | 4.8 | TTGTAATCGATTTCAT |
|
Position: -83
Score: 4.6 Sequence: TTGCAAGCGCTTGCAA
Locus tag: SSP0410
|
||||
| SSP0410 | -83 | 4.6 | TTGCAAGCGCTTGCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gntR | ||||
| Ortholog function: gluconate operon transcriptional repressor | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2295 | -79 | 4.7 | AAGAAAGCGCTTGCAA |
| Staphylococcus capitis SK14 | STACA0001_1009 | -83 | 4.7 | AAGAAAGCGCTTGCAA |
| Staphylococcus epidermidis ATCC 12228 | SE2046 | -83 | 4.7 | AAGAAAGCGCTTGCAA |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1950 | -53 | 4.7 | ATGTAAGCGGTTGCAA |
| Staphylococcus haemolyticus JCSC1435 | SH0574 | -81 | 4.7 | AAGAAAGCGTTTGCAA |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0410 | -83 | 4.6 | TTGCAAGCGCTTGCAA |
| Macrococcus caseolyticus JCSC5402 | MCCL_0405 | -325 | 4.6 | AcGAAAGCGtTTaCAa |
|
Position: -66
Score: 4.4 Sequence: TTGGAACCGGTTACAA
Locus tag: SSP0512
|
||||
| SSP0512 | -66 | 4.4 | TTGGAACCGGTTACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: scrA | ||||
| Ortholog function: PTS system, sucrose-specific IIBC component | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2167 | -127 | 4.6 | ATGAATGCGCTATCAA |
| -61 | 4.4 | TTGGAACCGGTTACAA | ||
| Staphylococcus capitis SK14 | STACA0001_1097 | -63 | 4.4 | TTGGAACCGGTTACAA |
| -34 | 4.2 | ATGGAACCGGTTTCTA | ||
| Staphylococcus epidermidis ATCC 12228 | SE1959 | -58 | 4.4 | TTGGAACCGGTTACAA |
| Staphylococcus haemolyticus JCSC1435 | SH0671 | -63 | 4.4 | TTGGAACCGGTTACAA |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0512 | -66 | 4.4 | TTGGAACCGGTTACAA |
|
Position: -151
Score: 5 Sequence: TAGAAAACGCTTTCAT
Locus tag: SSP0523
|
||||
| SSP0523 | -151 | 5 | TAGAAAACGCTTTCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SSP0523 | ||||
| Ortholog function: putative regulatory protein (DeoR family) | ||||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_2418 | -151 | 4.6 | ACGAAAACGTTTTCAT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0523 | -151 | 5 | TAGAAAACGCTTTCAT |
|
Position: -37
Score: 5 Sequence: ATGAAAGCGTTTTCTA
Locus tag: SSP0524
|
||||
| SSP0524 | -37 | 5 | ATGAAAGCGTTTTCTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gutB | ||||
| Ortholog function: putative zinc-binding dehydrogenase | ||||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_2417 | -40 | 4.6 | ATGAAAACGTTTTCGT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0524 | -37 | 5 | ATGAAAGCGTTTTCTA |
|
Position: -47
Score: 4.7 Sequence: ATGAAAGCGTATACTT
Locus tag: SSP0532
|
||||
| SSP0532 | -47 | 4.7 | ATGAAAGCGTATACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SE0247 | ||||
| Ortholog function: major myo-inositol transporter IolT | ||||
| Staphylococcus capitis SK14 | STACA0001_0048 | -61 | 4.9 | ATTAAAACGCTTTCAT |
| Staphylococcus epidermidis ATCC 12228 | SE0247 | 2 | 4.3 | GTTGAAACGCTTTCAT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1871 | -47 | 4.7 | ATGAAAGCGTATACTT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0532 | -47 | 4.7 | ATGAAAGCGTATACTT |
|
Position: -318
Score: 4.1 Sequence: AGTAAAGCGTTTTCTA
Locus tag: SSP0538
|
||||
| SSP0538 | -318 | 4.1 | AGTAAAGCGTTTTCTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SE1944 | ||||
| Ortholog function: putative glycosyltransferase | ||||
| Staphylococcus capitis SK14 | STACA0001_1120 | -267 | 4.7 | ATTAAAGCGCTTTCTA |
| Staphylococcus epidermidis ATCC 12228 | SE1944 | -245 | 4.4 | ATTAAAGCGCTTTCTC |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1866 | -254 | 4.5 | GAGAAAGCGCTTTCTA |
| Staphylococcus haemolyticus JCSC1435 | SH0692 | -248 | 4.7 | ATTAAAACGCTTTCTT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0538 | -318 | 4.1 | AGTAAAGCGTTTTCTA |
|
Position: -90
Score: 4.1 Sequence: TAGAAAACGCTTTACT
Locus tag: SSP0539
|
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| SSP0539 | -90 | 4.1 | TAGAAAACGCTTTACT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mqo | ||||
| Ortholog function: malate:quinone oxidoreductase | ||||
| Staphylococcus capitis SK14 | STACA0001_1121 | -93 | 4.7 | TAGAAAGCGCTTTAAT |
| Staphylococcus epidermidis ATCC 12228 | SE1943 | -81 | 4.4 | GAGAAAGCGCTTTAAT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1865 | -85 | 4.5 | TAGAAAGCGCTTTCTC |
| Staphylococcus haemolyticus JCSC1435 | SH0693 | -77 | 4.7 | AAGAAAGCGTTTTAAT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0539 | -90 | 4.1 | TAGAAAACGCTTTACT |
|
Position: -74
Score: 5 Sequence: TTGTAAACGTTTACTT
Locus tag: SSP0557
|
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| SSP0557 | -74 | 5 | TTGTAAACGTTTACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gltS | ||||
| Ortholog function: sodium/glutamate symporter | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2135 | -64 | 4.5 | TTTATAACGCTTACAT |
| Staphylococcus capitis SK14 | STACA0001_1139 | -75 | 4.5 | TTTATAACGCTTACAT |
| Staphylococcus epidermidis ATCC 12228 | SE1924 | -71 | 4.1 | TTTATAAGGTTTACAT |
| Staphylococcus haemolyticus JCSC1435 | SH0713 | -64 | 4.5 | TTTATAGCGCTTACAA |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0557 | -74 | 5 | TTGTAAACGTTTACTT |
|
Position: -73
Score: 4.3 Sequence: ATGTAAGCACTATCAT
Locus tag: SSP0563
|
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| SSP0563 | -73 | 4.3 | ATGTAAGCACTATCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: araB | ||||
| Ortholog function: putative L-ribulokinase | ||||
| Staphylococcus capitis SK14 | STACA0001_1147 | -81 | 4.6 | TTGAAAGCCCTATCAT |
| Staphylococcus epidermidis ATCC 12228 | SE1914 | -101 | 4.6 | TTGTAAACACTTACAT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0563 | -73 | 4.3 | ATGTAAGCACTATCAT |
|
Position: -113
Score: 4.8 Sequence: AAGGAAACGCTTACAT
Locus tag: SSP0582
|
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| SSP0582 | -113 | 4.8 | AAGGAAACGCTTACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glvR | ||||
| Ortholog function: transcriptional regulator of maltose utilization, RpiR family | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2115 | -241 | 4.7 | TAGTAAACGCTTACAC |
| Staphylococcus capitis SK14 | STACA0001_1165 | -115 | 5 | TAGTAAACGCTTACAT |
| Staphylococcus epidermidis ATCC 12228 | SE1898 | -109 | 5 | TAGTAAACGCTTACAT |
| Staphylococcus haemolyticus JCSC1435 | SH0731 | -142 | 4.3 | ATAAAAGCGTTTTCTT |
| -115 | 4.7 | TAGTAAACGCTTACAC | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0582 | -113 | 4.8 | AAGGAAACGCTTACAT |
|
Position: -117
Score: 4.8 Sequence: ATGTAAGCGTTTCCTT
Locus tag: SSP0583
|
||||
| SSP0583 | -117 | 4.8 | ATGTAAGCGTTTCCTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glvC | ||||
| Ortholog function: maltose-specific enzyme IICB of PTS system | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2114 | -104 | 4.7 | GTGTAAGCGTTTACTA |
| Staphylococcus capitis SK14 | STACA0001_1166 | -113 | 5 | ATGTAAGCGTTTACTA |
| Staphylococcus epidermidis ATCC 12228 | SE1897 | -104 | 5 | ATGTAAGCGTTTACTA |
| Staphylococcus haemolyticus JCSC1435 | SH0732 | -121 | 4.7 | GTGTAAGCGTTTACTA |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0583 | -117 | 4.8 | ATGTAAGCGTTTCCTT |
|
Position: -114
Score: 5 Sequence: ATGTAAACCCTTACAT
Locus tag: SSP0591
|
||||
| SSP0591 | -114 | 5 | ATGTAAACCCTTACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA2109 | ||||
| Ortholog function: probable amino-acid or metabolite transporter | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2109 | -122 | 4.2 | CTGTAAACGATTGCAT |
| Staphylococcus capitis SK14 | STACA0001_1171 | -119 | 4.5 | GTGTAATCGATTTCAT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1812 | -249 | 5 | ATGAAAGCGCATACAT |
| Staphylococcus haemolyticus JCSC1435 | SH0739 | -173 | 4.8 | ATGGAAGCGATTTCAA |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0591 | -114 | 5 | ATGTAAACCCTTACAT |
| Macrococcus caseolyticus JCSC5402 | MCCL_0079 | -103 | 4.3 | GTGAAAACGTTTTCGT |
|
Position: -35
Score: 4.2 Sequence: ATGAAACCGATTACAG
Locus tag: SSP0596
|
||||
| SSP0596 | -35 | 4.2 | ATGAAACCGATTACAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA0184 | ||||
| Ortholog function: hypothetical protein | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0184 | -63 | 4.8 | ATGTAAGCGATTACAC |
| Staphylococcus capitis SK14 | STACA0001_1175 | -63 | 4.5 | TTGTAAACGTTTAATA |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_2140 | -85 | 5.1 | ATGAAAGCGATTACAA |
| Staphylococcus haemolyticus JCSC1435 | SH0743 | -33 | 3.8 | ATGTAAGTGATTACAG |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0596 | -35 | 4.2 | ATGAAACCGATTACAG |
|
Position: -109
Score: 5.1 Sequence: ATGTAAGCGTTTTCTT
Locus tag: SSP0598
|
||||
| SSP0598 | -109 | 5.1 | ATGTAAGCGTTTTCTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA2105 | ||||
| Ortholog function: hypothetical protein | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2105 | -117 | 4.7 | ATGTAAGCGTTTTCCA |
| Staphylococcus capitis SK14 | STACA0001_1178 | -131 | 5 | TTGTAAGCGTTTTCTA |
| Staphylococcus epidermidis ATCC 12228 | SE1885 | -130 | 5 | TTGTAAGCGTTTTCTA |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1807 | -119 | 5.1 | ATGTAAGCGTTTACTT |
| Staphylococcus haemolyticus JCSC1435 | SH0745 | -127 | 4.7 | TTGTAAGCGTTTTCCT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0598 | -109 | 5.1 | ATGTAAGCGTTTTCTT |
|
Position: -64
Score: 4.6 Sequence: TTGAAAACGATTGCAA
Locus tag: SSP0714
|
||||
| SSP0714 | -64 | 4.6 | TTGAAAACGATTGCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SAS074 | ||||
| Ortholog function: hypothetical protein | ||||
| Staphylococcus aureus subsp. aureus N315 | SAS074 | -64 | 5 | TTGAAAACGATTACAA |
| Staphylococcus capitis SK14 | STACA0001_1305 | -62 | 5 | TTGAAAACGATTTCAA |
| Staphylococcus epidermidis ATCC 12228 | SE1763 | -62 | 4.7 | TTGAAAACGATTACAC |
| -15 | 4 | AAGGAAGTGTTTTCAA | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1673 | -64 | 5 | TTGAAAACGTTTTCTA |
| Staphylococcus haemolyticus JCSC1435 | SH0868 | -63 | 4.7 | TTGAAAACGATTACAC |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0714 | -64 | 4.6 | TTGAAAACGATTGCAA |
|
Position: -128
Score: 4.6 Sequence: TTGCAATCGTTTTCAA
Locus tag: SSP0715
|
||||
| SSP0715 | -128 | 4.6 | TTGCAATCGTTTTCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA1975 | ||||
| Ortholog function: predicted membrane-bound hydrolase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1975 | -128 | 5 | TTGTAATCGTTTTCAA |
| Staphylococcus capitis SK14 | STACA0001_1306 | -131 | 5 | TTGAAATCGTTTTCAA |
| Staphylococcus epidermidis ATCC 12228 | SE1762 | -130 | 4.7 | GTGTAATCGTTTTCAA |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1672 | -141 | 5 | TAGAAAACGTTTTCAA |
| Staphylococcus haemolyticus JCSC1435 | SH0869 | -129 | 4.7 | GTGTAATCGTTTTCAA |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0715 | -128 | 4.6 | TTGCAATCGTTTTCAA |
|
Position: -101
Score: 4.6 Sequence: ATAAAAACGCTTACAA
Locus tag: SSP0759
|
||||
| SSP0759 | -101 | 4.6 | ATAAAAACGCTTACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fbaA | ||||
| Ortholog function: fructose-bisphosphate aldolase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1927 | -142 | 4.5 | ATGTATACGTTTGCAT |
| Staphylococcus capitis SK14 | STACA0001_0829 | -144 | 4.3 | ATGAATGCGGTTGCAA |
| Staphylococcus epidermidis ATCC 12228 | SE1723 | -143 | 4.4 | ATGTATTCGCTTCCAA |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1628 | -143 | 4.8 | TTGAATACGTTTTCAT |
| -102 | 4.3 | TTAAAACCGCTTACAT | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0759 | -101 | 4.6 | ATAAAAACGCTTACAA |
|
Position: -68
Score: 4.4 Sequence: TTTAAAGCGATTCCAT
Locus tag: SSP0836
|
||||
| SSP0836 | -68 | 4.4 | TTTAAAGCGATTCCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: scrR | ||||
| Ortholog function: sucrose operon repressor | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1847 | -65 | 4.3 | TTTAAAGCGGTTACAC |
| Staphylococcus capitis SK14 | STACA0001_2124 | -67 | 4.7 | TTTAAAGCGATTACAT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0836 | -68 | 4.4 | TTTAAAGCGATTCCAT |
|
Position: -100
Score: 4.6 Sequence: ATGTAAACGATTTAAA
Locus tag: SSP0875
|
||||
| SSP0875 | -100 | 4.6 | ATGTAAACGATTTAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sdcS | ||||
| Ortholog function: sodium-dependent dicarboxylate transporter | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1732 | -162 | 4.9 | TTGAAAGCGCATTCAT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1495 | -138 | 4.9 | ATGTATACGTTTACAT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0875 | -100 | 4.6 | ATGTAAACGATTTAAA |
|
Position: -137
Score: 4.1 Sequence: ATGGAAGCGCTTAACA
Locus tag: SSP0889
|
||||
| SSP0889 | -137 | 4.1 | ATGGAAGCGCTTAACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: putP | ||||
| Ortholog function: high affinity proline permease | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1718 | -137 | 4.1 | ACGAAAGCGCTTCCTA |
| Staphylococcus capitis SK14 | STACA0001_1955 | -134 | 4.5 | GAGTAAGCGCTTTCTA |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1474 | -137 | 4.3 | ATGTAAACGCTTTACT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0889 | -137 | 4.1 | ATGGAAGCGCTTAACA |
|
Position: -43
Score: 4.9 Sequence: TTGTAAAGGCTTACAT
Locus tag: SSP0975
|
||||
| SSP0975 | -43 | 4.9 | TTGTAAAGGCTTACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pckA | ||||
| Ortholog function: phosphoenolpyruvate carboxykinase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1609 | -44 | 5 | ATGTAAAGGCTTACAT |
| Staphylococcus capitis SK14 | STACA0001_0678 | -44 | 5 | ATGTAAAGGCTTACAT |
| Staphylococcus epidermidis ATCC 12228 | SE1459 | -41 | 5 | ATGTAAGGGCTTACAT |
| Staphylococcus haemolyticus JCSC1435 | SH1137 | -53 | 4.9 | ATGTAAAGGCTTACAA |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0975 | -43 | 4.9 | TTGTAAAGGCTTACAT |
|
Position: -80
Score: 5 Sequence: TTGTAAACGATTTCAT
Locus tag: SSP0999
|
||||
| SSP0999 | -80 | 5 | TTGTAAACGATTTCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: putA | ||||
| Ortholog function: proline dehydrogenase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1585 | -71 | 4.7 | ATGAAAACGCTTTCTC |
| Staphylococcus capitis SK14 | STACA0001_0658 | -81 | 4.7 | ATGTAAACGCTTTCTC |
| Staphylococcus epidermidis ATCC 12228 | SE1437 | -80 | 5.1 | ATGTAAACGCTTTCTT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1371 | -71 | 4.9 | TTGTTAACGTTTTCAT |
| Staphylococcus haemolyticus JCSC1435 | SH1157 | -81 | 5 | TTGAAAACGCTTTCTA |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0999 | -80 | 5 | TTGTAAACGATTTCAT |
| Macrococcus caseolyticus JCSC5402 | MCCL_1451 | -52 | 4.9 | TTTAAAGCGTTTTCAT |
|
Position: -26
Score: 4.8 Sequence: AAGAAATCGTTTTCAA
Locus tag: SSP1027
|
||||
| SSP1027 | -26 | 4.8 | AAGAAATCGTTTTCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ccpA | ||||
| Ortholog function: catabolite control protein A | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1557 | -71 | 4.6 | AATAAAACGTTTACAA |
| Staphylococcus capitis SK14 | STACA0001_0629 | -26 | 4.3 | AATGAAACGCTTACAA |
| Staphylococcus epidermidis ATCC 12228 | SE1409 | -71 | 4.6 | AATAAAACGTTTACAA |
| Staphylococcus haemolyticus JCSC1435 | SH1186 | -26 | 4.6 | AATAAAACGCTTACAA |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1027 | -26 | 4.8 | AAGAAATCGTTTTCAA |
| Macrococcus caseolyticus JCSC5402 | MCCL_1413 | -25 | 4.1 | AATAAAACGTTTTCAG |
|
Position: -162
Score: 4.5 Sequence: ATGAAATCGCTTGCTT
Locus tag: SSP1029
|
||||
| SSP1029 | -162 | 4.5 | ATGAAATCGCTTGCTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: acuA | ||||
| Ortholog function: acetoin utilization protein AcuA | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1555 | -147 | 4.7 | GTGAAAACGCTTTCTT |
| Staphylococcus capitis SK14 | STACA0001_0627 | -154 | 4.9 | ATGAAATCGCTTTCTT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1339 | -213 | 5 | TTGAAATCGTTTTCAT |
| Staphylococcus haemolyticus JCSC1435 | SH1188 | -144 | 4.9 | ATGAAATCGCTTTCTT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1029 | -162 | 4.5 | ATGAAATCGCTTGCTT |
|
Position: -33
Score: 4.5 Sequence: AAGCAAGCGATTTCAT
Locus tag: SSP1030
|
||||
| SSP1030 | -33 | 4.5 | AAGCAAGCGATTTCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: acsA | ||||
| Ortholog function: acetyl-CoA synthetase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1554 | -37 | 4.7 | AAGAAAGCGTTTTCAC |
| Staphylococcus capitis SK14 | STACA0001_0626 | -35 | 4.9 | AAGAAAGCGATTTCAT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1338 | -34 | 5 | ATGAAAACGATTTCAA |
| Staphylococcus haemolyticus JCSC1435 | SH1189 | -36 | 4.9 | AAGAAAGCGATTTCAT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1030 | -33 | 4.5 | AAGCAAGCGATTTCAT |
| Macrococcus caseolyticus JCSC5402 | MCCL_1409 | 0 | 4.7 | ATGAAAACGATTACAC |
|
Position: -147
Score: 4.4 Sequence: TTGAAAGCGCTATCTC
Locus tag: SSP1031
|
||||
| SSP1031 | -147 | 4.4 | TTGAAAGCGCTATCTC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fhs | ||||
| Ortholog function: formyltetrahydrofolate synthetase | ||||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1031 | -147 | 4.4 | TTGAAAGCGCTATCTC |
| Macrococcus caseolyticus JCSC5402 | MCCL_1408 | -62 | 4.7 | ATGAAAGCGTTATCTT |
|
Position: -86
Score: 4.1 Sequence: AGTAAATCGTTTACAT
Locus tag: SSP1037
|
||||
| SSP1037 | -86 | 4.1 | AGTAAATCGTTTACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ptaA | ||||
| Ortholog function: PTS system N-acetylglucosamine-specific IIBC component | ||||
| Staphylococcus capitis SK14 | STACA0001_0618 | -168 | 4.6 | AATAAAACGTTTACAT |
| -48 | 4.3 | ATGAAAAGCATTTCAA | ||
| Staphylococcus epidermidis ATCC 12228 | SE1403 | -131 | 4.6 | AATTAAGCGTTTACAT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1332 | -44 | 4.6 | AATAAAACGTTTTCAT |
| Staphylococcus haemolyticus JCSC1435 | SH1198 | -101 | 3.9 | TCAAAAGCGCTTACAT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1037 | -86 | 4.1 | AGTAAATCGTTTACAT |
|
Position: -52
Score: 4.6 Sequence: TTGATTGCGCTTTCAT
Locus tag: SSP1057
|
||||
| SSP1057 | -52 | 4.6 | TTGATTGCGCTTTCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ald | ||||
| Ortholog function: alanine dehydrogenase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1531 | -52 | 4.5 | TTGATTGCGCTTTCAA |
| Staphylococcus capitis SK14 | STACA0001_0602 | -52 | 4.6 | ATGATTGCGCTTTCAA |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1314 | -54 | 4.6 | ATGATTGCGCTTTCAT |
| Staphylococcus haemolyticus JCSC1435 | SH1216 | -52 | 4.1 | CTGATTGCGCTTTCAT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1057 | -52 | 4.6 | TTGATTGCGCTTTCAT |
|
Position: -189
Score: 4.5 Sequence: AAGGAAACGCTTACTA
Position: -148
Score: 4.8 Sequence: TTTAAAACGTTTACAT
Locus tag: SSP1068
|
||||
| SSP1068 | -189 | 4.5 | AAGGAAACGCTTACTA | |
| -148 | 4.8 | TTTAAAACGTTTACAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pfkA | ||||
| Ortholog function: 6-phosphofructokinase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1521 | -151 | 4.8 | TTTAAAACGTTTACAT |
| Staphylococcus capitis SK14 | STACA0001_0592 | -107 | 4.8 | TTTAAAACGTTTACAT |
| Staphylococcus epidermidis ATCC 12228 | SE1374 | -152 | 4.8 | TTTAAAACGTTTACAT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1304 | -103 | 4.6 | TATAAAACGTTTACAT |
| Staphylococcus haemolyticus JCSC1435 | SH1226 | -152 | 4.6 | TATAAAACGTTTACAT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1068 | -148 | 4.8 | TTTAAAACGTTTACAT |
| Macrococcus caseolyticus JCSC5402 | MCCL_1365 | -100 | 4.8 | TTTAAAACGTTTTCAT |
|
Position: -42
Score: 4.8 Sequence: ATGAAAGCCATTTCAT
Locus tag: SSP1071
|
||||
| SSP1071 | -42 | 4.8 | ATGAAAGCCATTTCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: citZ | ||||
| Ortholog function: citrate synthase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1518 | -43 | 4.7 | TTGAAAGCCATTTCAT |
| Staphylococcus capitis SK14 | STACA0001_0589 | -43 | 4.4 | GTGAAAGCCATTTCAT |
| Staphylococcus epidermidis ATCC 12228 | SE1371 | -43 | 4.7 | TTGAAAGCCATTTCAT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1301 | -42 | 4.7 | ATGAAAGCCATTTCAA |
| Staphylococcus haemolyticus JCSC1435 | SH1230 | -42 | 4.4 | TTGGAAGCCATTACAT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1071 | -42 | 4.8 | ATGAAAGCCATTTCAT |
| Macrococcus caseolyticus JCSC5402 | MCCL_1362 | 0 | 4.4 | GTGAAAGCCATTACAT |
|
Position: -44
Score: 5 Sequence: TTGAAAGCGATTACAA
Locus tag: SSP1332
|
||||
| SSP1332 | -44 | 5 | TTGAAAGCGATTACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SSP1332 | ||||
| Ortholog function: hypothetical protein | ||||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1332 | -44 | 5 | TTGAAAGCGATTACAA |
|
Position: -33
Score: 4.4 Sequence: ATGTAACGGGTTACAT
Locus tag: SSP1395
|
||||
| SSP1395 | -33 | 4.4 | ATGTAACGGGTTACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rbsD | ||||
| Ortholog function: ribose permease | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0259 | -86 | 4.6 | ATGAAAACGCATGCAT |
| Staphylococcus capitis SK14 | STACA0001_0974 | -84 | 4 | GTGTAAGCGTATACAG |
| Staphylococcus epidermidis ATCC 12228 | SE2087 | -87 | 4.6 | GTGTAAGCGTATACAA |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_2420 | -101 | 4.9 | ATGAAAGCGTATACAT |
| Staphylococcus haemolyticus JCSC1435 | SH0176 | -31 | 5 | ATGTAAGCGGTTACAT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1395 | -33 | 4.4 | ATGTAACGGGTTACAT |
|
Position: -302
Score: 5 Sequence: TAGAAAACGCTTTCAA
Position: -30
Score: 5 Sequence: ATGAAAACGGTTACAT
Locus tag: SSP1396
|
||||
| SSP1396 | -302 | 5 | TAGAAAACGCTTTCAA | |
| -30 | 5 | ATGAAAACGGTTACAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rbsR2 | ||||
| Ortholog function: transcriptional repressor of ribose operon | ||||
| Staphylococcus haemolyticus JCSC1435 | SH0174 | -31 | 5 | ATGTAAGCGGTTACAT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1396 | -302 | 5 | TAGAAAACGCTTTCAA |
| -30 | 5 | ATGAAAACGGTTACAT | ||
| Macrococcus caseolyticus JCSC5402 | MCCL_0348 | -65 | 4.8 | TTGTAATCGATTTCAT |
| -34 | 4.5 | ATGTAATCGGTTACAC | ||
|
Position: -33
Score: 4.7 Sequence: TTGGAAACGCTTACTT
Locus tag: SSP1440
|
||||
| SSP1440 | -33 | 4.7 | TTGGAAACGCTTACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA1162 | ||||
| Ortholog function: hypothetical protein | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1162 | -27 | 4.4 | GTGAAAGCGCTTGCTT |
| Staphylococcus capitis SK14 | STACA0001_1569 | -30 | 4.8 | ATGAAAGCGCTTGCTT |
| Staphylococcus epidermidis ATCC 12228 | SE1007 | -29 | 4.4 | GTGAAAGCGCTTGCTA |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0968 | -30 | 4.7 | TTGTAAGCGCTTACTC |
| Staphylococcus haemolyticus JCSC1435 | SH1581 | -29 | 4.8 | ATGAAAGCGTTTCCTT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1440 | -33 | 4.7 | TTGGAAACGCTTACTT |
|
Position: -145
Score: 4.7 Sequence: TTGACAACGCTTACAA
Locus tag: SSP1461
|
||||
| SSP1461 | -145 | 4.7 | TTGACAACGCTTACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glpF | ||||
| Ortholog function: glycerol uptake facilitator | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1140 | -133 | 4.8 | TTGACAACGCTTTCAT |
| Staphylococcus capitis SK14 | STACA0001_1544 | -132 | 4.7 | TTGACAACGCTTACAA |
| Staphylococcus epidermidis ATCC 12228 | SE0977 | -130 | 4.7 | TTGACAACGCTTACAA |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0948 | -126 | 4.8 | TTGACAACGCTTTCAT |
| Staphylococcus haemolyticus JCSC1435 | SH1614 | -128 | 4.7 | TTGACAACGCTTACAA |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1461 | -145 | 4.7 | TTGACAACGCTTACAA |
| Macrococcus caseolyticus JCSC5402 | MCCL_0891 | -133 | 4.7 | TTGACAACGTTTACAT |
|
Position: -232
Score: 4.7 Sequence: ATGGAAGCGTTTTCTA
Locus tag: SSP1648
|
||||
| SSP1648 | -232 | 4.7 | ATGGAAGCGTTTTCTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sdhC | ||||
| Ortholog function: succinate dehydrogenase cytochrome b subunit | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0994 | -235 | 4.4 | GTGGAAGCGTTTTCTA |
| Staphylococcus capitis SK14 | STACA0001_2159 | -286 | 4.4 | GTGGAAGCGTTTTCTA |
| Staphylococcus epidermidis ATCC 12228 | SE0840 | -270 | 4.7 | ATGGAAGCGTTTTCTA |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0765 | -291 | 5 | TTGTAAACGCTTTCTA |
| Staphylococcus haemolyticus JCSC1435 | SH1814 | -285 | 4.7 | ATGGAAGCGTTTTCTA |
| -61 | 4 | TTGAAAAGACTTTCTT | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1648 | -232 | 4.7 | ATGGAAGCGTTTTCTA |
| Macrococcus caseolyticus JCSC5402 | MCCL_1319 | -85 | 4.5 | ATGTAATCGGTTTCTT |
|
Position: -198
Score: 5 Sequence: ATGTAAGGGCTTACAT
Locus tag: SSP1818
|
||||
| SSP1818 | -198 | 5 | ATGTAAGGGCTTACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rocD | ||||
| Ortholog function: ornithine aminotransferase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0818 | -150 | 4.9 | ATGTAAGGGTTTTCAA |
| Staphylococcus capitis SK14 | STACA0001_0169 | -184 | 4.9 | TTGTAAGGGCTTTCAA |
| Staphylococcus epidermidis ATCC 12228 | SE0653 | -180 | 5 | ATGTAAGGGCTTACAT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0565 | -49 | 4.8 | ATGTAAGGGCTTTCTT |
| Staphylococcus haemolyticus JCSC1435 | SH1993 | -161 | 4.5 | CTGTAAGGGCTTTCAT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1818 | -198 | 5 | ATGTAAGGGCTTACAT |
| Macrococcus caseolyticus JCSC5402 | MCCL_0583 | -44 | 4.7 | ATGTAAGGGTTTTCTA |
|
Position: -124
Score: 4 Sequence: ATGAAAACGCTTTACC
Locus tag: SSP1869
|
||||
| SSP1869 | -124 | 4 | ATGAAAACGCTTTACC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yusH | ||||
| Ortholog function: hypothetical protein | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0760 | -152 | 5 | ATGTAAACGTTTACTA |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1869 | -124 | 4 | ATGAAAACGCTTTACC |
|
Position: -44
Score: 4.3 Sequence: AAGAAAGCGTAAACAT
Locus tag: SSP2019
|
||||
| SSP2019 | -44 | 4.3 | AAGAAAGCGTAAACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fruR | ||||
| Ortholog function: transcription repressor of fructose operon, DeoR family | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0653 | -43 | 4 | GTGAAAGCGTACTCAT |
| Staphylococcus capitis SK14 | STACA0001_0331 | -46 | 4.3 | ATGTAAGCGCACTCAT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0346 | -44 | 4.3 | ATGTAAGCGGAAACAT |
| Staphylococcus haemolyticus JCSC1435 | SH2196 | -45 | 4.3 | ATGTAAGCGTACACAT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP2019 | -44 | 4.3 | AAGAAAGCGTAAACAT |
| Macrococcus caseolyticus JCSC5402 | MCCL_0452 | -28 | 3.9 | ATGAAAGTGTTCACAA |
|
Position: -67
Score: 4.2 Sequence: ATATTAGCGTTTACAT
Locus tag: SSP2070
|
||||
| SSP2070 | -67 | 4.2 | ATATTAGCGTTTACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dhaK | ||||
| Ortholog function: dihydroxyacetone kinase, DhaK subunit | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0605 | -64 | 4.6 | ATGATAGCGCATTCAT |
| Staphylococcus epidermidis ATCC 12228 | SE0236 | -146 | 4.6 | TTGAAAGCGTATACTA |
| Staphylococcus haemolyticus JCSC1435 | SH2244 | -64 | 4.6 | ATGATAGCGCATACAT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP2070 | -67 | 4.2 | ATATTAGCGTTTACAT |
|
Position: -164
Score: 4.3 Sequence: TTGAAATCGCAATCAA
Locus tag: SSP2164
|
||||
| SSP2164 | -164 | 4.3 | TTGAAATCGCAATCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA0511 | ||||
| Ortholog function: uncharacterized epimerase/dehydratase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0511 | -97 | 4.4 | AAGAAAGCGCTTTTAT |
| Staphylococcus capitis SK14 | STACA0001_0477 | -98 | 4.4 | AAGAAAGCGCTTTTAT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0213 | -144 | 4.4 | ATGTAAGCGCTTTACT |
| Staphylococcus haemolyticus JCSC1435 | SH2450 | -101 | 4.4 | AAGAAAGCGCTTTTAT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP2164 | -164 | 4.3 | TTGAAATCGCAATCAA |
| -98 | 3.9 | AATAAAGCGTTTTTAT | ||
| Macrococcus caseolyticus JCSC5402 | MCCL_1856 | -94 | 4.3 | ATGTAAGCGTTTCTAA |
|
Position: -149
Score: 5 Sequence: TAGTAAACGCTTACAT
Locus tag: SSP2178
|
||||
| SSP2178 | -149 | 5 | TAGTAAACGCTTACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: araB | ||||
| Ortholog function: putative L-ribulokinase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0510 | -53 | 4.7 | AAGAAAACGCTTGCAA |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP2178 | -149 | 5 | TAGTAAACGCTTACAT |
| -38 | 4.5 | AGGAAAGCGTTTTCTT | ||
|
Position: -65
Score: 5 Sequence: ATGTAAGCGTTTACTA
Locus tag: SSP2179
|
||||
| SSP2179 | -65 | 5 | ATGTAAGCGTTTACTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: xltD | ||||
| Ortholog function: Xylitol dehydrogenase | ||||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP2179 | -176 | 4.5 | AAGAAAACGCTTTCCT |
| -65 | 5 | ATGTAAGCGTTTACTA | ||
|
Position: -100
Score: 4.8 Sequence: TAGAAAACGCTTTCTA
Locus tag: SSP2205
|
||||
| SSP2205 | -100 | 4.8 | TAGAAAACGCTTTCTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: kbl | ||||
| Ortholog function: 2-amino-3-ketobutyrate coenzyme A ligase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0508 | -79 | 4.6 | ATGATAAGGCTTTCAA |
| Staphylococcus capitis SK14 | STACA0001_0483 | -73 | 4.6 | ATGATAAGGCTTTCAT |
| Staphylococcus haemolyticus JCSC1435 | SH2457 | -74 | 4.3 | ATGATAGTGCTTTCAT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP2205 | -100 | 4.8 | TAGAAAACGCTTTCTA |
|
Position: -65
Score: 4.2 Sequence: ATGTAAGTGCTATCAA
Locus tag: SSP2235
|
||||
| SSP2235 | -65 | 4.2 | ATGTAAGTGCTATCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nupC | ||||
| Ortholog function: pyrimidine nucleoside transporter | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0479 | -63 | 4.4 | ATGTTAGCCCTTCCAT |
| Staphylococcus capitis SK14 | STACA0001_0514 | -61 | 4.3 | ATGTTAGCGCGTTCAT |
| Staphylococcus epidermidis ATCC 12228 | SE0283 | -63 | 4.2 | ATGTTAGCGTGTTCAT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP2235 | -65 | 4.2 | ATGTAAGTGCTATCAA |
| Macrococcus caseolyticus JCSC5402 | MCCL_1890 | -70 | 4 | TGTTTAGCGCTTTCAT |
|
Position: -81
Score: 4.9 Sequence: ATGAAAACCTTTACAA
Locus tag: SSP2282
|
||||
| SSP2282 | -81 | 4.9 | ATGAAAACCTTTACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: treP | ||||
| Ortholog function: phosphotransferase system trehalose-specific enzyme IIBC component homolog | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0432 | -68 | 4.9 | TTGAAAGCCTTTACAT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0108 | -71 | 4.9 | TTGAAAGCCTTTACAT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0109 | -71 | 4.9 | TTGAAAGCCTTTACAT |
| Staphylococcus haemolyticus JCSC1435 | SH2538 | -69 | 4.9 | ATGAAAGCCTTTACAA |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP2282 | -81 | 4.9 | ATGAAAACCTTTACAA |
| Macrococcus caseolyticus JCSC5402 | MCCL_1938 | -49 | 4.4 | TTGAAAACCCTTTCAG |
|
Position: -145
Score: 5.1 Sequence: ATGTAAGCGTTTTCTT
Locus tag: SSP2297
|
||||
| SSP2297 | -145 | 5.1 | ATGTAAGCGTTTTCTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lip | ||||
| Ortholog function: triacylglycerol lipase precursor | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2463 | -137 | 4.7 | ATGTAAACGCTTTCTC |
| Staphylococcus capitis SK14 | STACA0001_0084 | -170 | 4.2 | TTGGAAACGCTTTCTG |
| Staphylococcus haemolyticus JCSC1435 | SH0168 | -169 | 4.7 | ATGTAAACGCTTTCTC |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP2297 | -145 | 5.1 | ATGTAAGCGTTTTCTT |
|
Position: -36
Score: 4.6 Sequence: ATGTAAGCGCAATCAT
Locus tag: SSP2425
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| SSP2425 | -36 | 4.6 | ATGTAAGCGCAATCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA0225 | ||||
| Ortholog function: short-chain acyl-CoA oxidase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0225 | -86 | 4.9 | GTGTAAGCGTTTACAA |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_2408 | -63 | 5.3 | ATGTAAGCGTTTACAA |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP2425 | -36 | 4.6 | ATGTAAGCGCAATCAT |
|
Position: -91
Score: 5 Sequence: ATGTAAGGGCTTACAT
Locus tag: SSP2427
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| SSP2427 | -91 | 5 | ATGTAAGGGCTTACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fadX | ||||
| Ortholog function: putative acetyl-CoA transferase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0227 | -64 | 4.6 | TTGTAAGGGTTTACAC |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_2406 | -61 | 4.9 | TTGTAAGGGTTTACAT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP2427 | -91 | 5 | ATGTAAGGGCTTACAT |
|
Position: -39
Score: 5 Sequence: AAGAAAACGCTTTCAA
Locus tag: SSP2440
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| SSP2440 | -39 | 5 | AAGAAAACGCTTTCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cstA | ||||
| Ortholog function: carbon starvation protein CstA | ||||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_2309 | -64 | 5.1 | AAGTAAGCGTTTACAT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP2440 | -39 | 5 | AAGAAAACGCTTTCAA |