Propagation of CodY regulog to Staphylococcus aureus subsp. aureus str. Newman
| Source regulog: | CodY - Staphylococcaceae |
| Regulator type: | Transcription factor |
| Regulator family: | CodY |
| Regulation mode: | repressor |
| Biological process: | Amino acid metabolism |
| Effector: | Branched-chain amino acids |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Staphylococcus aureus subsp. aureus str. Newman |
| Orthologous TF(s) | NWMN_1165 |
| Regulated genes | 73 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -314
Score: 4.6 Sequence: AGTAATCAGAAAATT
Locus tag: NWMN_0011
|
||||
| NWMN_0011 | -314 | 4.6 | AGTAATCAGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: metX | ||||
| Ortholog function: homoserine-o-acetyltransferase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0011 | -293 | 4.6 | AGTAATCAGAAAATT |
| Staphylococcus capitis SK14 | STACA0001_1363 | -236 | 4.6 | ATTAATTAGAAAATT |
| -227 | 4.6 | AAAATTCAGACTATT | ||
| Staphylococcus epidermidis ATCC 12228 | SE0011 | -233 | 4.8 | AATAATTAGAAAATT |
| -224 | 4.5 | AAAATTTAGACTATT | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0012 | -230 | 4.8 | AATAATTAGAAAATT |
| -221 | 4 | AAAATTATGATATTT | ||
|
Position: -102
Score: 4.7 Sequence: AAATATCTGAATATT
Locus tag: NWMN_0071
|
||||
| NWMN_0071 | -102 | 4.7 | AAATATCTGAATATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: butA | ||||
| Ortholog function: acetoin reductase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0122 | -102 | 4.7 | AAATATCTGAATATT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0065 | -68 | 4.6 | ATTATTCAGAAAATA |
|
Position: -102
Score: 4.2 Sequence: AAATTTTATATAATT
Locus tag: NWMN_0077
|
||||
| NWMN_0077 | -102 | 4.2 | AAATTTTATATAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sodM | ||||
| Ortholog function: superoxide dismutase SodM | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0128 | -102 | 4.2 | AAATTTTATATAATT |
| -41 | 4 | AATTATTATAAAAGT | ||
|
Position: -205
Score: 4.1 Sequence: ATTTTTTTAAATAAA
Position: -32
Score: 4.1 Sequence: ATTTTAATGAAAATT
Locus tag: NWMN_0095
|
||||
| NWMN_0095 | -205 | 4.1 | ATTTTTTTAAATAAA | |
| -32 | 4.1 | ATTTTAATGAAAATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: capA | ||||
| Ortholog function: capsular polysaccharide synthesis enzyme Cap5A | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0144 | -32 | 4.1 | ATTTTAATGAAAATT |
|
Position: 3
Score: 4.2 Sequence: AGAATTTTAAATATT
Locus tag: NWMN_0103
|
||||
| NWMN_0103 | 3 | 4.2 | AGAATTTTAAATATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: capI | ||||
| Ortholog function: capsular polysaccharide synthesis enzyme Cap5I | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0152 | -32 | 4.1 | ATTTTAATGAAAATT |
|
Position: -88
Score: 4.8 Sequence: AATATTTAAAAAAAT
Locus tag: NWMN_0115
|
||||
| NWMN_0115 | -88 | 4.8 | AATATTTAAAAAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA0165 | ||||
| Ortholog function: hypothetical protein | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0165 | -97 | 4.2 | TTTTATCTAAATATT |
| -88 | 4.8 | AATATTTAAAAAAAT | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0460 | -99 | 4.8 | ATTTATCAGAAAATT |
|
Position: -117
Score: 5.2 Sequence: AATTTTCAAAAAATT
Locus tag: NWMN_0130
|
||||
| NWMN_0130 | -117 | 5.2 | AATTTTCAAAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: brnQ1 | ||||
| Ortholog function: branched-chain amino acid transport system | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0180 | -117 | 5.2 | AATTTTCAAAAAATT |
| Staphylococcus capitis SK14 | STACA0001_0024 | -81 | 4.7 | TTTTTTCTGAAAATT |
| Staphylococcus epidermidis ATCC 12228 | SE0217 | -173 | 4.4 | AATATTAAAAATTTT |
| Staphylococcus haemolyticus JCSC1435 | SH0145 | -81 | 4.5 | AATTTATTGAATATT |
| Macrococcus caseolyticus JCSC5402 | MCCL_0050 | -86 | 4.5 | AATTTTTTAATTAAT |
| -77 | 4.8 | ATTAATCAGAAAATT | ||
|
Position: -55
Score: 4.5 Sequence: ATTTTTCAGATTTTT
Position: -46
Score: 4.5 Sequence: ATTTTTTAAATTATT
Locus tag: NWMN_0248
|
||||
| NWMN_0248 | -55 | 4.5 | ATTTTTCAGATTTTT | |
| -46 | 4.5 | ATTTTTTAAATTATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: brnQ2 | ||||
| Ortholog function: branched-chain amino acid transport system | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0294 | -55 | 4.5 | ATTTTTCAGATTTTT |
| -46 | 4.5 | ATTTTTTAAATTATT | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0418 | -53 | 5 | AATATTCAGAAATTT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP2299 | -112 | 4.3 | AATACTTTAAATATT |
| -103 | 4.1 | AATATTATAAATTAT | ||
| -94 | 4.5 | AATTATCTGACATTT | ||
|
Position: -121
Score: 4.5 Sequence: AATATTTTAAAAAGT
Locus tag: NWMN_0373
|
||||
| NWMN_0373 | -121 | 4.5 | AATATTTTAAAAAGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA0367 | ||||
| Ortholog function: putative NADPH-flavin oxidoreductase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0367 | -121 | 4.2 | AATATTTTTAAAAGT |
| Staphylococcus capitis SK14 | STACA0001_1449 | -145 | 4.8 | AAATATCTGAAAATT |
| Staphylococcus epidermidis ATCC 12228 | SE2355 | -114 | 5.1 | AATTATCTGAAAATT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0041 | -140 | 4.3 | AATATTTATATTATT |
| Staphylococcus haemolyticus JCSC1435 | SH2590 | -144 | 4.8 | AAATATCTGAAAATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP2331 | -193 | 4.3 | AATAATTTAACTATT |
|
Position: -29
Score: 4.4 Sequence: TATATTCAAAAATTT
Locus tag: NWMN_0374
|
||||
| NWMN_0374 | -29 | 4.4 | TATATTCAAAAATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: tcyP | ||||
| Ortholog function: L-cystine uptake protein tcyP | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0368 | -72 | 4.3 | AATATTTTAAAATTA |
| -29 | 4.4 | TATATTCAAAAATTT | ||
| Staphylococcus capitis SK14 | STACA0001_1450 | -133 | 5.1 | ATTATTCAGAAAATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP2329 | -138 | 4.6 | AATTATCAGAAAATA |
|
Position: -169
Score: 4.4 Sequence: CTTTTTTAGAATATT
Locus tag: NWMN_0435
|
||||
| NWMN_0435 | -169 | 4.4 | CTTTTTTAGAATATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gltC | ||||
| Ortholog function: transcription activator of glutamate synthase operon | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0429 | -169 | 4.4 | CTTTTTTAGAATATT |
| -160 | 4.3 | AATATTCTGATATTA | ||
| Staphylococcus capitis SK14 | STACA0001_1493 | -179 | 5 | AATTTTCTGACAATT |
| -41 | 4.6 | AAATTTTAGAATTTT | ||
| Staphylococcus epidermidis ATCC 12228 | SE2313 | -171 | 5 | AATTTTCTGACAATT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0104 | -113 | 4.7 | AATTTTCAGATTTTT |
| -39 | 4.5 | ATTATTCTAATTATT | ||
| Staphylococcus haemolyticus JCSC1435 | SH2541 | -138 | 5.4 | AATTTTCAGAAAATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP2285 | -118 | 5 | AAAATTCTGAAAATT |
|
Position: -26
Score: 4.4 Sequence: AATATTCTAAAAAAG
Locus tag: NWMN_0436
|
||||
| NWMN_0436 | -26 | 4.4 | AATATTCTAAAAAAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gltB | ||||
| Ortholog function: glutamate synthase large subunit | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0430 | -35 | 4.3 | TAATATCAGAATATT |
| -26 | 4.4 | AATATTCTAAAAAAG | ||
| Staphylococcus capitis SK14 | STACA0001_1494 | -174 | 4.6 | AAAATTCTAAAATTT |
| -36 | 5 | AATTGTCAGAAAATT | ||
| Staphylococcus epidermidis ATCC 12228 | SE2312 | -35 | 5 | AATTGTCAGAAAATT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0105 | -117 | 4.5 | AATAATTAGAATAAT |
| -43 | 4.7 | AAAAATCTGAAAATT | ||
| Staphylococcus haemolyticus JCSC1435 | SH2540 | -34 | 5.4 | AATTTTCTGAAAATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP2284 | -34 | 5 | AATTTTCAGAATTTT |
|
Position: -92
Score: 5.2 Sequence: AATTTTTAGAAAATT
Locus tag: NWMN_0516
|
||||
| NWMN_0516 | -92 | 5.2 | AATTTTTAGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ilvE | ||||
| Ortholog function: branched-chain amino acid aminotransferase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0512 | -92 | 5.2 | AATTTTTAGAAAATT |
| Staphylococcus capitis SK14 | STACA0001_0476 | -101 | 4.4 | TTTATTTTGAATATT |
| -92 | 4.7 | AATATTTAGAAAACT | ||
| Staphylococcus epidermidis ATCC 12228 | SE0318 | -99 | 4.1 | TCTATTTTGAATATT |
| -90 | 5.2 | AATATTTAGAAAATT | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0215 | -101 | 4.5 | ATTTTTTTAAATTTT |
| -92 | 4.8 | AATTTTCTAAAAACT | ||
| Staphylococcus haemolyticus JCSC1435 | SH2449 | -91 | 5.2 | AATTTTTAGAAAATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP2163 | -86 | 5.2 | AATTTTTTGAAAATT |
| Macrococcus caseolyticus JCSC5402 | MCCL_1855 | -85 | 4.8 | AATTTTCTAAAAACT |
|
Position: -178
Score: 5 Sequence: AAAATTCAGAATATT
Locus tag: NWMN_0615
|
||||
| NWMN_0615 | -178 | 5 | AAAATTCAGAATATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA0601 | ||||
| Ortholog function: hypothetical protein | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0601 | -400 | 5 | AAAATTCAGAATATT |
| -391 | 4.1 | AATATTTTTAATTAT | ||
| Staphylococcus capitis SK14 | STACA0001_0382 | -211 | 5 | AAAATTCAGAATATT |
| Staphylococcus epidermidis ATCC 12228 | SE0420 | -206 | 5 | AAAATTCAGAATATT |
| -197 | 4.1 | AATATTTAAATTTAT | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0294 | -120 | 4.8 | AATTTTCAGAATTAT |
| Staphylococcus haemolyticus JCSC1435 | SH2248 | -172 | 5 | AAAATTCAGAAAATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP2074 | -166 | 4.8 | AAATTTCAGAATTTT |
|
Position: -195
Score: 4.5 Sequence: ATATTTTTGAAAAAT
Locus tag: NWMN_0640
|
||||
| NWMN_0640 | -195 | 4.5 | ATATTTTTGAAAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA0626 | ||||
| Ortholog function: hypothetical protein | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0626 | -195 | 4.5 | ATATTTTTGAAAAAT |
| Staphylococcus capitis SK14 | STACA0001_0358 | -200 | 4.6 | ATTAATTAGAAAATT |
| -142 | 4.3 | AATTTTAAGTAAATT | ||
| -98 | 4.2 | ATAATTTTGAAAATA | ||
| Staphylococcus haemolyticus JCSC1435 | SH2222 | -200 | 4.1 | TTTATTTAGAATTTT |
| -191 | 4.6 | AATTTTCAGATAATA | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP2051 | -190 | 5.1 | AATTTTCAGAAAAAT |
|
Position: -112
Score: 4.6 Sequence: AATATTCTCAATATT
Locus tag: NWMN_0696
|
||||
| NWMN_0696 | -112 | 4.6 | AATATTCTCAATATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: tppB | ||||
| Ortholog function: di-tripepride ABC transporter | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0682 | -112 | 4.6 | AATATTCTCAATATT |
| -103 | 4.1 | AATATTTTTATTTTT | ||
| Staphylococcus capitis SK14 | STACA0001_0301 | -124 | 4.3 | AATTGACTGAATATT |
| -115 | 4.5 | AATATTCATATTATT | ||
| -98 | 4.8 | TATTTTTTGAAAATT | ||
| Staphylococcus epidermidis ATCC 12228 | SE0509 | -107 | 4 | CTTTTTTTAAATTTT |
| -98 | 5.2 | AATTTTTTGAAAATT | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0374 | -114 | 5.3 | AATATTCTGAAAATT |
| -88 | 4.5 | TATTTTAAGAAAATT | ||
| Staphylococcus haemolyticus JCSC1435 | SH2166 | -102 | 5 | AAATTTCTAAAAATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1991 | -118 | 4.1 | AAATAACAGAATATT |
| -109 | 4.6 | AATATTCTCAATATT | ||
| Macrococcus caseolyticus JCSC5402 | MCCL_0478 | -117 | 4.6 | AACTTTTTGAAAATT |
| -36 | 5.3 | AATTTTCAGAATATT | ||
|
Position: -32
Score: 4.6 Sequence: AATATTCAGATAACT
Locus tag: NWMN_0832
|
||||
| NWMN_0832 | -32 | 4.6 | AATATTCAGATAACT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: argG | ||||
| Ortholog function: argininosuccinate synthase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0822 | -32 | 4.6 | AATATTCAGATAACT |
| Staphylococcus capitis SK14 | STACA0001_0165 | -33 | 5 | AAAATTCTGAAAATT |
| Staphylococcus epidermidis ATCC 12228 | SE0657 | -180 | 4.5 | AATTTACAGAAATTT |
| -171 | 4.3 | AAATTTTAAAATATA | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0569 | -33 | 4.5 | AAAATTCTAACTATT |
| Staphylococcus haemolyticus JCSC1435 | SH1989 | -31 | 5.1 | AATTTTCAGAAAAAT |
|
Position: -66
Score: 4.7 Sequence: AGATTTCAGAAAATT
Locus tag: NWMN_0856
|
||||
| NWMN_0856 | -66 | 4.7 | AGATTTCAGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: oppB | ||||
| Ortholog function: oligopeptide ABC transporter permease protein OppB | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0845 | -66 | 4.7 | AGATTTCAGAAAATT |
| Staphylococcus capitis SK14 | STACA0001_0146 | -36 | 4.2 | AATATACATAATATT |
| -27 | 4.6 | AATATTCTGAAAAAA | ||
| Staphylococcus epidermidis ATCC 12228 | SE0680 | -63 | 4.9 | ATATTTCTGAAAATT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0588 | -113 | 5.2 | AATATTCTAAAAATT |
| -65 | 4.2 | AATATTAAAATATTT | ||
| -56 | 4.9 | ATATTTCTGAAAATT | ||
| Staphylococcus haemolyticus JCSC1435 | SH1970 | -116 | 4.7 | AATTTTGTGAAAATT |
| -60 | 4.9 | ATATTTCTGAAAATT | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1794 | -56 | 4.8 | ATATTTCTGAATATT |
| Macrococcus caseolyticus JCSC5402 | MCCL_0605 | -186 | 4.8 | AATTTTTAAAAAAAT |
| -132 | 4.8 | AATCTTCTGAAAATT | ||
|
Position: -84
Score: 4.7 Sequence: AATATTCTAAAAATA
Locus tag: NWMN_0861
|
||||
| NWMN_0861 | -84 | 4.7 | AATATTCTAAAAATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: appA | ||||
| Ortholog function: oligopeptide transport system oligopeptide-binding protein AppA | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0850 | -93 | 4.1 | AAATAACTGAATATT |
| -84 | 4.7 | AATATTCTAAAAATA | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0936 | -65 | 4.6 | AATAGTCAGACAATT |
|
Position: -18
Score: 5.1 Sequence: AATATTCTGAAAAAT
Locus tag: NWMN_0883
|
||||
| NWMN_0883 | -18 | 5.1 | AATATTCTGAAAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA0871 | ||||
| Ortholog function: sodium-alanine symporter homolog | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0871 | -150 | 4.3 | ATTTATAAGAATATT |
| -141 | 5.1 | AATATTCTGAAAAAT | ||
| Staphylococcus aureus subsp. aureus N315 | SA0871 | -150 | 4.3 | ATTTATAAGAATATT |
| -141 | 5.1 | AATATTCTGAAAAAT | ||
| Macrococcus caseolyticus JCSC5402 | MCCL_0082 | -101 | 4.7 | AATATTCAGAATTAT |
| Macrococcus caseolyticus JCSC5402 | MCCL_0082 | -101 | 4.7 | AATATTCAGAATTAT |
|
Position: -147
Score: 4.9 Sequence: AATATTCTGACTATT
Locus tag: NWMN_0895
|
||||
| NWMN_0895 | -147 | 4.9 | AATATTCTGACTATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: comK | ||||
| Ortholog function: competence transcription factor | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0882 | -147 | 4.9 | AATATTCTGACTATT |
| Staphylococcus capitis SK14 | STACA0001_0106 | -151 | 4.7 | AATATTCTGACATTT |
| Staphylococcus epidermidis ATCC 12228 | SE0731 | -147 | 4.7 | AATATTCTGACATTT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0642 | -145 | 4.6 | AATATTCTGACTTTT |
| -136 | 4.1 | ACTTTTTAAAAAATA | ||
| Staphylococcus haemolyticus JCSC1435 | SH1926 | -148 | 4.6 | AATATTCTGACTTTT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1755 | -186 | 4.6 | AATATTCAGACTTTT |
| -92 | 4.5 | AAATTTATAAAAATT | ||
| Macrococcus caseolyticus JCSC5402 | MCCL_1546 | -195 | 4.8 | ATAATTCTGAAAATT |
| -186 | 4.4 | AAAATTTAAATTATT | ||
| -86 | 4.7 | AAATTTCTTAAAATT | ||
|
Position: -77
Score: 4.9 Sequence: AATAGTCAGAATATT
Locus tag: NWMN_0896
|
||||
| NWMN_0896 | -77 | 4.9 | AATAGTCAGAATATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA0883 | ||||
| Ortholog function: hypothetical protein | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0883 | -77 | 4.9 | AATAGTCAGAATATT |
| Staphylococcus capitis SK14 | STACA0001_0107 | -83 | 4.7 | AAATGTCAGAATATT |
| Staphylococcus epidermidis ATCC 12228 | SE0729 | -82 | 4.7 | AAATGTCAGAATATT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0643 | -178 | 4.2 | AATTATAAAAATAAT |
| -91 | 4.1 | TATTTTTTAAAAAGT | ||
| -82 | 4.6 | AAAAGTCAGAATATT | ||
| Staphylococcus haemolyticus JCSC1435 | SH1925 | -80 | 4.6 | AAAAGTCAGAATATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1756 | -174 | 4.5 | AATTTTTATAAATTT |
| -80 | 4.6 | AAAAGTCTGAATATT | ||
|
Position: -50
Score: 4.2 Sequence: TAATTTCTAAATTTT
Position: -41
Score: 4.4 Sequence: AATTTTTAGACAATA
Position: 19
Score: 4.1 Sequence: CTAATTCTAAATATT
Locus tag: NWMN_0919
|
||||
| NWMN_0919 | -50 | 4.2 | TAATTTCTAAATTTT | |
| -41 | 4.4 | AATTTTTAGACAATA | ||
| 19 | 4.1 | CTAATTCTAAATATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: patA | ||||
| Ortholog function: putative aminotransferase A | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0902 | -50 | 4.2 | TAATTTCTAAATTTT |
| -41 | 4.4 | AATTTTTAGACAATA | ||
| Staphylococcus capitis SK14 | STACA0001_2317 | -58 | 4.1 | ACTATTTTAACAATT |
| Staphylococcus epidermidis ATCC 12228 | SE0747 | -59 | 4.1 | ACTATTTAAACAATT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0656 | -108 | 4.2 | TTTATTCTAAAATTT |
| Staphylococcus haemolyticus JCSC1435 | SH1916 | -65 | 4.9 | ATTATTCTAAAAATT |
| Macrococcus caseolyticus JCSC5402 | MCCL_1585 | -86 | 4.3 | AATGTTCTAATAATT |
|
Position: -91
Score: 4.4 Sequence: TAAATTTTGAAAATT
Position: -23
Score: 4.6 Sequence: ATTAGTTAGAAAATT
Locus tag: NWMN_0979
|
||||
| NWMN_0979 | -91 | 4.4 | TAAATTTTGAAAATT | |
| -23 | 4.6 | ATTAGTTAGAAAATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pycA | ||||
| Ortholog function: pyruvate carboxylase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0963 | -41 | 4.6 | ATTAGTTAGAAAATT |
| Staphylococcus capitis SK14 | STACA0001_2249 | -42 | 4.6 | ATTAGTTAGAAAATT |
| -33 | 4.4 | AAAATTCAAAAAATA | ||
| Staphylococcus epidermidis ATCC 12228 | SE0813 | -40 | 4.1 | TATTATCTAATTATT |
| -31 | 4.9 | ATTATTTAGAAAATT | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0740 | -34 | 4.6 | AAAATTCAAATAATT |
| Staphylococcus haemolyticus JCSC1435 | SH1838 | -41 | 4.5 | ATTAGTTAGAATATT |
| -32 | 4 | AATATTCAAACTTTA | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1675 | -38 | 4.7 | ACTTTTTAGAAAATT |
| -29 | 4.1 | AAAATTCAAAATTTA | ||
|
Position: -187
Score: 4.4 Sequence: ATTTATCAGATTATT
Position: -178
Score: 4.2 Sequence: ATTATTTTTAAAAAT
Locus tag: NWMN_1216
|
||||
| NWMN_1216 | -187 | 4.4 | ATTTATCAGATTATT | |
| -178 | 4.2 | ATTATTTTTAAAAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glnR | ||||
| Ortholog function: HTH-type transcriptional regulator GlnR | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1149 | -187 | 4.4 | ATTTATCAGATTATT |
| -178 | 4.2 | ATTATTTTTAAAAAT | ||
| Staphylococcus capitis SK14 | STACA0001_1553 | -202 | 4.3 | TTTTGTCAGAAAATT |
| -191 | 4.1 | AATTATAAAATTATT | ||
| -150 | 4.2 | ATTAATTAAAAATTT | ||
| Staphylococcus epidermidis ATCC 12228 | SE0986 | -194 | 4.8 | AAATGTCTGAAAATT |
| -185 | 4.7 | AAAATTTTAAAAATT | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0958 | -157 | 4.8 | AATTTACAGAAAATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1452 | -179 | 4.2 | ATTTTTTTGAATAAA |
| -157 | 4.9 | AATTTTCTAATAATT | ||
| -56 | 4.4 | ATTAATCTGATTATT | ||
|
Position: -75
Score: 4.6 Sequence: AATATTCAAAATATA
Position: -23
Score: 4.7 Sequence: AATTTTCTGATTTTT
Locus tag: NWMN_1239
|
||||
| NWMN_1239 | -75 | 4.6 | AATATTCAAAATATA | |
| -23 | 4.7 | AATTTTCTGATTTTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: thrA | ||||
| Ortholog function: aspartokinase III | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1163 | -87 | 4.6 | AATATTCAAAATATA |
| -35 | 4.7 | AATTTTCTGATTTTT | ||
| Staphylococcus capitis SK14 | STACA0001_1570 | -33 | 4.7 | AATTTTCTGATTTTT |
| Staphylococcus epidermidis ATCC 12228 | SE1008 | -33 | 4.7 | AATTTTCTGATTTTT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0969 | -97 | 4.4 | AAAGTTCAAAAAATT |
| -79 | 4.2 | AATATGTTGAAATTT | ||
| Staphylococcus haemolyticus JCSC1435 | SH1580 | -35 | 4.7 | AATTTTCTGATTTTT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1439 | -35 | 4.7 | AATTTTCTGATTTTT |
|
Position: -170
Score: 4.7 Sequence: AAAAATCAGAAAATT
Position: -118
Score: 4.6 Sequence: TATATTTTGAATATT
Locus tag: NWMN_1240
|
||||
| NWMN_1240 | -170 | 4.7 | AAAAATCAGAAAATT | |
| -118 | 4.6 | TATATTTTGAATATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hom | ||||
| Ortholog function: homoserine dehydrogenase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1164 | -170 | 4.7 | AAAAATCAGAAAATT |
| -118 | 4.6 | TATATTTTGAATATT | ||
| Staphylococcus capitis SK14 | STACA0001_1571 | -170 | 4.7 | AAAAATCAGAAAATT |
| -91 | 4.3 | AAAATTAAGAATAAT | ||
| Staphylococcus epidermidis ATCC 12228 | SE1009 | -170 | 4.7 | AAAAATCAGAAAATT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0970 | -127 | 4.2 | AAATTTCAACATATT |
| -109 | 4.4 | AATTTTTTGAACTTT | ||
| Staphylococcus haemolyticus JCSC1435 | SH1579 | -178 | 4.7 | AAAAATCAGAAAATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1438 | -168 | 4.7 | AAAAATCAGAAAATT |
|
Position: -110
Score: 4.7 Sequence: AAAAATCAGAAAATT
Locus tag: NWMN_1245
|
||||
| NWMN_1245 | -110 | 4.7 | AAAAATCAGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rocC | ||||
| Ortholog function: amino acid permease | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1169 | -110 | 4.7 | AAAAATCAGAAAATT |
| -101 | 4.1 | AAAATTTTAATTTTT | ||
| Staphylococcus capitis SK14 | STACA0001_1576 | -112 | 5.1 | AAATTTCAGAAAATT |
| -102 | 4.7 | AAATTTTTAAATATT | ||
| Staphylococcus epidermidis ATCC 12228 | SE1015 | -112 | 4.6 | AAATATCAGAAAAAT |
| -103 | 4.1 | AAAAATTTAACAATT | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0975 | -121 | 4.3 | TTTTTTCAGAATTTT |
| -112 | 4.7 | AATTTTTTAAATTTT | ||
| Staphylococcus haemolyticus JCSC1435 | SH1574 | -114 | 5.1 | AAATTTCAGAAAATT |
| -105 | 4.4 | AAAATTTAAAATTTT | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1433 | -111 | 4.4 | AATATTTAAACATTT |
| Macrococcus caseolyticus JCSC5402 | MCCL_0990 | -56 | 4.4 | AATTTTCTTAATTAT |
|
Position: -111
Score: 4.1 Sequence: AAAAATTAAAATTTT
Position: -102
Score: 4.7 Sequence: AATTTTCTGATTTTT
Locus tag: NWMN_1246
|
||||
| NWMN_1246 | -111 | 4.1 | AAAAATTAAAATTTT | |
| -102 | 4.7 | AATTTTCTGATTTTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: katA | ||||
| Ortholog function: catalase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1170 | -111 | 4.1 | AAAAATTAAAATTTT |
| -102 | 4.7 | AATTTTCTGATTTTT | ||
| Staphylococcus capitis SK14 | STACA0001_1577 | -131 | 4.7 | AATATTTAAAAATTT |
| -121 | 5.1 | AATTTTCTGAAATTT | ||
| Staphylococcus epidermidis ATCC 12228 | SE1016 | -142 | 4.1 | AATTGTTAAATTTTT |
| -133 | 4.6 | ATTTTTCTGATATTT | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_2336 | -28 | 4.1 | ATTATTCTAAATAAG |
| Staphylococcus haemolyticus JCSC1435 | SH1573 | -123 | 4.4 | AAAATTTTAAATTTT |
| -114 | 5.1 | AATTTTCTGAAATTT | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1432 | -129 | 4.4 | AAATGTTTAAATATT |
|
Position: -34
Score: 5.1 Sequence: ATTATTCTGAAAATT
Locus tag: NWMN_1277
|
||||
| NWMN_1277 | -34 | 5.1 | ATTATTCTGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: tyrA | ||||
| Ortholog function: prephenate dehydrogenase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1197 | -34 | 5.1 | ATTATTCTGAAAATT |
| Staphylococcus capitis SK14 | STACA0001_1611 | -35 | 4.8 | ACTATTCTGAAAATT |
| Staphylococcus epidermidis ATCC 12228 | SE1047 | -251 | 4.4 | AATTATCTGATTTTT |
| -242 | 4.6 | ATTTTTCTAATTATT | ||
| -35 | 4.4 | GTTATTCTGAAAATT | ||
| Staphylococcus haemolyticus JCSC1435 | SH1544 | -35 | 4.8 | CATATTCTGAAAATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1387 | -36 | 4.8 | ACTATTCTGAAAATT |
|
Position: -96
Score: 4.5 Sequence: AATATTTCGAATATT
Locus tag: NWMN_1279
|
||||
| NWMN_1279 | -96 | 4.5 | AATATTTCGAATATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: trpE | ||||
| Ortholog function: anthranilate synthase component I | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1199 | -439 | 4.5 | AATAATTAGAATTTT |
| Staphylococcus capitis SK14 | STACA0001_1613 | -438 | 4.6 | AATAATTAGAAAAAT |
| -429 | 4.4 | AAAAATCAGATAATT | ||
| Staphylococcus epidermidis ATCC 12228 | SE1048 | -431 | 4.6 | AATAATTAGAAAAAT |
| -422 | 4.4 | AAAAATCAGATAATT | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1012 | -464 | 4.3 | CATTATTAAAAAATT |
| Staphylococcus haemolyticus JCSC1435 | SH1542 | -453 | 4.3 | AAATATCAAACAATT |
|
Position: -342
Score: 4.4 Sequence: AATTTTCAGGTTATT
Position: -324
Score: 4 Sequence: AAAAATCTAAATTAT
Locus tag: NWMN_1304
|
||||
| NWMN_1304 | -342 | 4.4 | AATTTTCAGGTTATT | |
| -324 | 4 | AAAAATCTAAATTAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lysC | ||||
| Ortholog function: aspartokinase II | ||||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1037 | -340 | 4.3 | AAATTTCTAAAAATC |
| Staphylococcus haemolyticus JCSC1435 | SH1518 | -344 | 4.1 | ATTTTTCAGTCTATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1357 | -350 | 4.5 | ATTTTTCAGTAAATT |
| -341 | 4.3 | TAAATTTAAAAAATT | ||
|
Position: -45
Score: 5.2 Sequence: AATATTCTAAAAATT
Locus tag: NWMN_1305
|
||||
| NWMN_1305 | -45 | 5.2 | AATATTCTAAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: asd | ||||
| Ortholog function: aspartate semialdehyde dehydrogenase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1226 | -45 | 5.2 | AATATTCTAAAAATT |
| Staphylococcus capitis SK14 | STACA0001_1640 | -44 | 5 | AATTTTCTTAAAATT |
| Staphylococcus epidermidis ATCC 12228 | SE1074 | -46 | 5.2 | AATTTTCTAAAAATT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1038 | -340 | 4.3 | AAATTTCTAAAAATC |
| Staphylococcus haemolyticus JCSC1435 | SH1517 | -42 | 4.8 | AATTTTTTTAAAATT |
| -33 | 4.3 | AAAATTCAAACAAAT | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1356 | -350 | 4.5 | ATTTTTCAGTAAATT |
| -341 | 4.3 | TAAATTTAAAAAATT | ||
|
Position: -64
Score: 4.5 Sequence: AATATTTTAAATATA
Locus tag: NWMN_1348
|
||||
| NWMN_1348 | -64 | 4.5 | AATATTTTAAATATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: tcdB | ||||
| Ortholog function: threonine dehydratase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1271 | -64 | 4.5 | AATATTTTAAATATA |
|
Position: -150
Score: 4.6 Sequence: AATATTAAGATAATT
Position: -141
Score: 4.2 Sequence: ATAATTCTGACATTT
Locus tag: NWMN_1377
|
||||
| NWMN_1377 | -150 | 4.6 | AATATTAAGATAATT | |
| -141 | 4.2 | ATAATTCTGACATTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aroC | ||||
| Ortholog function: chorismate synthase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1299 | -150 | 4.6 | AATATTAAGATAATT |
| -141 | 4.2 | ATAATTCTGACATTT | ||
| Staphylococcus epidermidis ATCC 12228 | SE1155 | -138 | 4 | TCTTTTTTAAATATT |
| Staphylococcus haemolyticus JCSC1435 | SH1446 | -124 | 4.7 | AATTATTAAAATATT |
| -115 | 4.6 | AATATTCTAATAAAT | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1278 | -113 | 4.6 | ATTTTTATGAATATT |
|
Position: -106
Score: 4.8 Sequence: AATTATCAAAATATT
Locus tag: NWMN_1437
|
||||
| NWMN_1437 | -106 | 4.8 | AATTATCAAAATATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA1363 | ||||
| Ortholog function: Lipoate-protein ligase A | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1363 | -106 | 4.8 | AATTATCAAAATATT |
| Staphylococcus capitis SK14 | STACA0001_1770 | -109 | 4.6 | ATTTATCAAAATATT |
| Staphylococcus epidermidis ATCC 12228 | SE1217 | -108 | 4.6 | ATTTATCAAAATATT |
| Staphylococcus haemolyticus JCSC1435 | SH1383 | -100 | 4.3 | ATTTATCAAAATTTT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1222 | -121 | 4.6 | ATTTATCAAAATATT |
|
Position: -66
Score: 4.8 Sequence: AATATTTTGATAATT
Locus tag: NWMN_1438
|
||||
| NWMN_1438 | -66 | 4.8 | AATATTTTGATAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA1364 | ||||
| Ortholog function: putative sulfurtransferase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1364 | -66 | 4.8 | AATATTTTGATAATT |
| Staphylococcus capitis SK14 | STACA0001_1771 | -66 | 4.6 | AATATTTTGATAAAT |
| Staphylococcus epidermidis ATCC 12228 | SE1218 | -66 | 4.6 | AATATTTTGATAAAT |
| Staphylococcus haemolyticus JCSC1435 | SH1382 | -66 | 4.3 | AAAATTTTGATAAAT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1221 | -67 | 4.6 | AATATTTTGATAAAT |
|
Position: -225
Score: 4 Sequence: CATTTTTTAAATTAT
Position: -224
Score: 4 Sequence: ATTTTTTAAATTATA
Position: -140
Score: 4.1 Sequence: AAATGTTTAATTATT
Locus tag: NWMN_1456
|
||||
| NWMN_1456 | -225 | 4 | CATTTTTTAAATTAT | |
| -224 | 4 | ATTTTTTAAATTATA | ||
| -140 | 4.1 | AAATGTTTAATTATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sodA | ||||
| Ortholog function: superoxide dismutase SodA | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1382 | -140 | 4.1 | AAATGTTTAATTATT |
| Staphylococcus capitis SK14 | STACA0001_1791 | -219 | 4.3 | TATTTTCAAAAAACT |
| -184 | 4.2 | AATGGTCTGAAAAAT | ||
| Staphylococcus epidermidis ATCC 12228 | SE1240 | -101 | 4.4 | AATAATTTAATAATT |
| Staphylococcus haemolyticus JCSC1435 | SH1363 | -248 | 4.3 | AATTATTTAAAAATA |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1203 | -182 | 4.2 | AATTTTTAAAATTGT |
|
Position: -54
Score: 5.4 Sequence: AATTTTCAGAAAATT
Locus tag: NWMN_1616
|
||||
| NWMN_1616 | -54 | 5.4 | AATTTTCAGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA1544 | ||||
| Ortholog function: putative phosphoserine transaminase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1544 | -54 | 5.4 | AATTTTCAGAAAATT |
| Staphylococcus capitis SK14 | STACA0001_0615 | -53 | 5.2 | AATATTCAGAATATT |
| Staphylococcus epidermidis ATCC 12228 | SE1400 | -54 | 5 | AATATTCAGAATTTT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1329 | -55 | 4.9 | TATTTTCAGAATATT |
| Staphylococcus haemolyticus JCSC1435 | SH1201 | -55 | 5 | AATTATCAGAATATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1040 | -55 | 4.9 | TATTTTCTGAAAATT |
|
Position: -127
Score: 4.3 Sequence: ATTATATAGAAAATT
Position: -78
Score: 4.6 Sequence: AAAATTTTGAATAAT
Position: -69
Score: 4.1 Sequence: AATAATTAGAAATGT
Locus tag: NWMN_1626
|
||||
| NWMN_1626 | -127 | 4.3 | ATTATATAGAAAATT | |
| -78 | 4.6 | AAAATTTTGAATAAT | ||
| -69 | 4.1 | AATAATTAGAAATGT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: acsA | ||||
| Ortholog function: acetyl-CoA synthetase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1554 | -78 | 4.6 | AAAATTTTGAATAAT |
| -69 | 4.1 | AATAATTAGAAATGT | ||
| Staphylococcus capitis SK14 | STACA0001_0626 | -78 | 4.3 | AGATTTTTGAAAAAT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1338 | -96 | 4.2 | AAAAATCAGAATTAT |
| -87 | 4.1 | AATTATCATAATTAT | ||
| Staphylococcus haemolyticus JCSC1435 | SH1189 | -87 | 4.9 | AATTATCTAAAAATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1030 | -75 | 4.9 | ATTATTTTGAAAATT |
| Macrococcus caseolyticus JCSC5402 | MCCL_1409 | -48 | 4.5 | TATATTTTGAAAAAT |
|
Position: -114
Score: 4.1 Sequence: ACATTTCTAATTATT
Position: -105
Score: 4.6 Sequence: ATTATTCAAAATTTT
Position: -56
Score: 4.3 Sequence: AATTTTCTATATAAT
Locus tag: NWMN_1627
|
||||
| NWMN_1627 | -114 | 4.1 | ACATTTCTAATTATT | |
| -105 | 4.6 | ATTATTCAAAATTTT | ||
| -56 | 4.3 | AATTTTCTATATAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: acuA | ||||
| Ortholog function: hypothetical protein | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1555 | -114 | 4.1 | ACATTTCTAATTATT |
| -105 | 4.6 | ATTATTCAAAATTTT | ||
| -56 | 4.3 | AATTTTCTATATAAT | ||
| Staphylococcus capitis SK14 | STACA0001_0627 | -110 | 4.3 | ATTTTTCAAAAATCT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1339 | -159 | 4.1 | ATAATTATGATAATT |
| -150 | 4.2 | ATAATTCTGATTTTT | ||
| Staphylococcus haemolyticus JCSC1435 | SH1188 | -92 | 4.9 | AATTTTTAGATAATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1029 | -119 | 4.9 | AATTTTCAAAATAAT |
| Macrococcus caseolyticus JCSC5402 | MCCL_1410 | -39 | 4.5 | ATTTTTCAAAATATA |
|
Position: -35
Score: 4.3 Sequence: ATAATTATGAATATT
Locus tag: NWMN_1750
|
||||
| NWMN_1750 | -35 | 4.3 | ATAATTATGAATATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: artQ | ||||
| Ortholog function: Arginine ABC transport system ArtQ | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1675 | -167 | 4.3 | ATAATTATGAATATT |
| Staphylococcus capitis SK14 | STACA0001_0720 | 6 | 4.2 | AAAATTATTAAAATT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1432 | -83 | 5.1 | AAATTTCAGAAAATT |
| -74 | 4 | AAAATTTAAAAATTA | ||
| Staphylococcus haemolyticus JCSC1435 | SH1104 | -72 | 4 | CTTTTTTAAAATTTT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0937 | -63 | 4.2 | ATTATATTGAATATT |
| Macrococcus caseolyticus JCSC5402 | MCCL_1584 | -87 | 4.3 | AATTATTAGAACATT |
|
Position: -309
Score: 4.4 Sequence: AATTAACTGAATATT
Locus tag: NWMN_1873
|
||||
| NWMN_1873 | -309 | 4.4 | AATTAACTGAATATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hlb | ||||
| Ortholog function: truncated beta-hemolysin | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1752 | -315 | 4.4 | AATTAACTGAATATT |
|
Position: -261
Score: 4.6 Sequence: AAAATTCTTAAAATT
Position: 4
Score: 4.2 Sequence: ATTATTTTGATAATA
Locus tag: NWMN_1943
|
||||
| NWMN_1943 | -261 | 4.6 | AAAATTCTTAAAATT | |
| 4 | 4.2 | ATTATTTTGATAATA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: agrB | ||||
| Ortholog function: accessory gene regulator B | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1842 | -261 | 4.6 | AAAATTCTTAAAATT |
| Staphylococcus haemolyticus JCSC1435 | SH0996 | -124 | 4.1 | ATATGTTAAAATATT |
|
Position: -37
Score: 4.6 Sequence: AATTGTCAGATTATT
Locus tag: NWMN_1950
|
||||
| NWMN_1950 | -37 | 4.6 | AATTGTCAGATTATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nrgA | ||||
| Ortholog function: ammonium transporter | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1848 | -38 | 4.6 | AATTGTCAGATTATT |
|
Position: -301
Score: 4.9 Sequence: AATTTTTAGACAATT
Locus tag: NWMN_1960
|
||||
| NWMN_1960 | -301 | 4.9 | AATTTTTAGACAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ilvD | ||||
| Ortholog function: dihydroxy-acid dehydratase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1858 | -301 | 4.9 | AATTTTTAGACAATT |
| -53 | 4.5 | ATATTTCAGAATTTT | ||
| Staphylococcus capitis SK14 | STACA0001_0526 | -327 | 4.9 | AATTGTTAGAAAATT |
| Staphylococcus epidermidis ATCC 12228 | SE1654 | -330 | 5.2 | AATTTTTAGAAAATT |
| -321 | 4.1 | AAAATTCTAAATTTA | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1559 | -316 | 4.8 | AATTTTAAAAAAATT |
| -307 | 4.3 | AAAATTCTAATAAAT | ||
| Staphylococcus haemolyticus JCSC1435 | SH0980 | -321 | 4.4 | AGTTGTTAGAAAATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0825 | -323 | 4.2 | AATTGACAGAAAAAT |
| -266 | 4 | ATTTATCAAATTTTT | ||
| -258 | 4.7 | AATTTTTAGATATTT | ||
| -249 | 4.1 | ATATTTCAAACAAAT | ||
| Macrococcus caseolyticus JCSC5402 | MCCL_0860 | -266 | 5.2 | AATTTTTAGAAAATT |
| -257 | 4.7 | AAAATTTTAAATATT | ||
|
Position: -143
Score: 4.5 Sequence: AGTTATTAGAAAATT
Locus tag: NWMN_2037
|
||||
| NWMN_2037 | -143 | 4.5 | AGTTATTAGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hmrA | ||||
| Ortholog function: N-acyl-L-amino acid amidohydrolase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1935 | -143 | 4.5 | AGTTATTAGAAAATT |
| Staphylococcus capitis SK14 | STACA0001_0837 | -235 | 4.6 | AATTGTAAGAAAATT |
| Staphylococcus epidermidis ATCC 12228 | SE1731 | -113 | 4.6 | AATTGTAAGAAAATT |
| -102 | 4.2 | AATTGTGTAAAAATT | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1636 | -176 | 4.1 | AATTTATTAAATTTT |
| Staphylococcus haemolyticus JCSC1435 | SH0902 | -179 | 4.7 | AATTTTCAAAATTAT |
| -52 | 4.5 | AATATCCAAAATATT | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0752 | -190 | 4.1 | TATTTTTATAAATTT |
| -181 | 4.6 | AAATTTCAGAAAATG | ||
|
Position: -220
Score: 5.2 Sequence: AATTTTCAAAAAATT
Locus tag: NWMN_2105
|
||||
| NWMN_2105 | -220 | 5.2 | AATTTTCAAAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA2002 | ||||
| Ortholog function: hypothetical regulator | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2002 | -220 | 5.1 | AATTTTTAAAAAATT |
| Staphylococcus haemolyticus JCSC1435 | SH0156 | -76 | 4.8 | AATTTTTAAAAATTT |
| -51 | 4.2 | AAATTTTTAAATTAT | ||
|
Position: -263
Score: 4.4 Sequence: AATATTATTAAAATT
Position: -183
Score: 4.7 Sequence: ATTTTTTAGAAAAAT
Locus tag: NWMN_2218
|
||||
| NWMN_2218 | -263 | 4.4 | AATATTATTAAAATT | |
| -183 | 4.7 | ATTTTTTAGAAAAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA2109 | ||||
| Ortholog function: probable amino-acid or metabolite transporter | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2109 | -183 | 4.7 | ATTTTTTAGAAAAAT |
| Staphylococcus capitis SK14 | STACA0001_1171 | -181 | 5.1 | AATTTTCAGAAAAAT |
| -101 | 4.1 | AATTGTAAAAATTTT | ||
| Staphylococcus epidermidis ATCC 12228 | SE1892 | -98 | 4.4 | AATTGTAAAAATATT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1812 | -468 | 4.4 | ATTATACTGAAAATT |
| -414 | 4.4 | AATATTCAAATAATA | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0591 | -88 | 4.4 | AATTGTTTAAATTTT |
| -79 | 4.4 | AATTTTTTGAATTTA | ||
|
Position: -78
Score: 4.9 Sequence: AATTTTCAGAAAAGT
Locus tag: NWMN_2222
|
||||
| NWMN_2222 | -78 | 4.9 | AATTTTCAGAAAAGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yocS | ||||
| Ortholog function: Uncharacterized sodium-dependent transporter yocS | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2112 | -87 | 4.2 | AATAATCTTAATTTT |
| -78 | 4.9 | AATTTTCAGAAAAGT | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0585 | -90 | 4.5 | AAAAATTAGAATATT |
| -81 | 5.2 | AATATTTAGAAAATT | ||
|
Position: -108
Score: 4.3 Sequence: TATATTTAAAAAAAT
Locus tag: NWMN_2337
|
||||
| NWMN_2337 | -108 | 4.3 | TATATTTAAAAAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aapA | ||||
| Ortholog function: D-serine/D-alanine/glycine transporter | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2226 | -108 | 4.3 | TATATTTAAAAAAAT |
| Staphylococcus aureus subsp. aureus N315 | SA2227 | -108 | 4.3 | TATATTTAAAAAAAT |
| Staphylococcus capitis SK14 | STACA0001_1050 | -166 | 4.8 | AATTTTTTGATTATT |
| -157 | 4.7 | ATTATTCTAAAAAAT | ||
| Staphylococcus epidermidis ATCC 12228 | SE2004 | -93 | 4.9 | ATATTTCTGAAAATT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1918 | -126 | 4.6 | AATTTTCTTATAATT |
| Staphylococcus haemolyticus JCSC1435 | SH0623 | -231 | 5.1 | AATTTTCAGAAATTT |
|
Position: -85
Score: 4.7 Sequence: AATTTTCTGCAAATT
Locus tag: NWMN_2343
|
||||
| NWMN_2343 | -85 | 4.7 | AATTTTCTGCAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA2233 | ||||
| Ortholog function: integral membrane efflux protein | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2233 | -85 | 4.7 | AATTTTCTGCAAATT |
| Staphylococcus capitis SK14 | STACA0001_1042 | -252 | 5.2 | AATTTTCTAAAAATT |
| Staphylococcus epidermidis ATCC 12228 | SE2010 | -246 | 5.2 | AATTTTCTAAAAATT |
|
Position: -82
Score: 4.1 Sequence: ATTTGTTTAACAATT
Locus tag: NWMN_2347
|
||||
| NWMN_2347 | -82 | 4.1 | ATTTGTTTAACAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: opuCA | ||||
| Ortholog function: glycine betaine/carnitine/choline ABC transporter opuCA | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2237 | -76 | 4.1 | ATTTGTTTAACAATT |
| Staphylococcus epidermidis ATCC 12228 | SE0222 | -43 | 4 | TATTTTTTAACAAAT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1934 | -517 | 4.7 | ATTTGTCTGAATATT |
|
Position: -75
Score: 4.9 Sequence: TATTTTCTGAAAATT
Locus tag: NWMN_2370
|
||||
| NWMN_2370 | -75 | 4.9 | TATTTTCTGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA2261 | ||||
| Ortholog function: putative p-aminobenzoyl-glutamate transporter | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2261 | -75 | 4.9 | CATTTTCTGAAAATT |
| Staphylococcus capitis SK14 | STACA0001_1021 | -78 | 5.1 | AAATTTCAGAAAATT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_2265 | -83 | 4.8 | AATTTTCAGAATTAT |
| Staphylococcus haemolyticus JCSC1435 | SH0589 | -75 | 5.1 | AAATTTCTGAAAATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0435 | -75 | 4.9 | TATTTTCAGAATATT |
|
Position: -205
Score: 4.8 Sequence: ATTAATCTGAAAATT
Locus tag: NWMN_2460
|
||||
| NWMN_2460 | -205 | 4.8 | ATTAATCTGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mtnE | ||||
| Ortholog function: transaminase MtnE involved in methionine biosynthesis via salvage pathway | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2347 | -205 | 4.8 | ATTAATCTGAAAATT |
| Staphylococcus capitis SK14 | STACA0001_0934 | -212 | 4.2 | AAATGTTTGAAAATA |
| -93 | 4.6 | ACTTATCTGAAAATT | ||
| Staphylococcus epidermidis ATCC 12228 | SE2122 | -61 | 4.4 | TTATTTCAGAAAATT |
| -52 | 4.5 | AAAATTCTAACTATT | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0010 | -257 | 4.4 | AAATGTCAGAATTTT |
| Staphylococcus haemolyticus JCSC1435 | SH0492 | -253 | 4.5 | ATAAATCTGAAAATT |
| -244 | 4.4 | AAAATTATAAATATT | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0294 | -203 | 4.3 | AATATTCTGATAAAA |
| Macrococcus caseolyticus JCSC5402 | MCCL_0180 | -222 | 4.8 | AATATTCTGAATACT |
|
Position: -179
Score: 4.7 Sequence: AAAATTCAGAATTTT
Locus tag: NWMN_2470
|
||||
| NWMN_2470 | -179 | 4.7 | AAAATTCAGAATTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA2357 | ||||
| Ortholog function: putative regulatory protein | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2357 | -188 | 4.2 | CTTTATCTAAAAATT |
| -179 | 4.7 | AAAATTCAGAATTTT | ||
| Staphylococcus capitis SK14 | STACA0001_0926 | -184 | 4.6 | AATTATCTAAATTTT |
| -175 | 4.4 | AATTTTCTGAAAACG | ||
| Staphylococcus epidermidis ATCC 12228 | SE2129 | -172 | 5.1 | AATTTTCAGAAAAAT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_2043 | -282 | 4.7 | CATATTTTGAAAATT |
| -69 | 4.5 | TATTATCAGAATATT | ||
| Staphylococcus haemolyticus JCSC1435 | SH0484 | -156 | 5.3 | AATATTCTGAAAATT |
| -147 | 4.1 | AAAATTTAGAATTTG | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0292 | -65 | 5.3 | AATATTCTGAAAATT |
| -56 | 4.2 | AAAATTAAGAAAATA | ||
|
Position: -227
Score: 4.9 Sequence: AATTGTTAGAAAATT
Position: -103
Score: 4.8 Sequence: ATTTTTCAGAATTTT
Locus tag: NWMN_2500
|
||||
| NWMN_2500 | -227 | 4.9 | AATTGTTAGAAAATT | |
| -103 | 4.8 | ATTTTTCAGAATTTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA2396 | ||||
| Ortholog function: putative amino acid transporter | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2396 | -226 | 4.9 | AATTGTTAGAAAATT |
| -103 | 4.8 | ATTTTTCAGAATTTT | ||
| -94 | 4.2 | AATTTTTAGACAAAA | ||
| Staphylococcus capitis SK14 | STACA0001_0893 | -295 | 4.3 | AATTTGTAAAATATT |
| -160 | 4.8 | ATTTTTCAGAATTTT | ||
| -151 | 4.2 | AATTTTTAGACAAAA | ||
| Staphylococcus epidermidis ATCC 12228 | SE2147 | -165 | 4.8 | ATTTTTCAGAATTTT |
| -156 | 4.2 | AATTTTTAGACAAAA | ||
| Staphylococcus haemolyticus JCSC1435 | SH0460 | -114 | 5.1 | AATTTTCAGAAATTT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0274 | -98 | 5.3 | AATTTTCTGAATATT |
| -89 | 4.3 | AATATTTAGATATAT | ||
|
Position: -127
Score: 4.5 Sequence: AATTATCAGAATATA
Locus tag: NWMN_2501
|
||||
| NWMN_2501 | -127 | 4.5 | AATTATCAGAATATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gabT | ||||
| Ortholog function: 4-aminobutyrate aminotransferase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2397 | -136 | 4 | AAAATTCTTAATTAT |
| -127 | 4.5 | AATTATCAGAATATA | ||
| Staphylococcus capitis SK14 | STACA0001_0892 | -175 | 4.7 | AATATTTTAATAATT |
| -166 | 4.3 | ATAATTCAGAAAATA | ||
| Staphylococcus epidermidis ATCC 12228 | SE2148 | -164 | 4.6 | AATATTCTAAATTAT |
| -155 | 4.6 | AATTATCAGAAAATA | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0283 | -127 | 4.8 | AAATATCTGAAAATT |
| Staphylococcus haemolyticus JCSC1435 | SH0459 | -145 | 4.6 | ATTATTCAGAAAATA |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0353 | -218 | 4.6 | ATTTTTCAGAATATA |
|
Position: -109
Score: 4.5 Sequence: TATATTCTGATAATT
Locus tag: NWMN_2502
|
||||
| NWMN_2502 | -109 | 4.5 | TATATTCTGATAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA2398 | ||||
| Ortholog function: hypothetical protein | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2398 | -109 | 4.5 | TATATTCTGATAATT |
| -100 | 4 | ATAATTAAGAATTTT | ||
| Staphylococcus capitis SK14 | STACA0001_0891 | -131 | 4.3 | TATTTTCTGAATTAT |
| -122 | 4.7 | AATTATTAAAATATT | ||
| Staphylococcus epidermidis ATCC 12228 | SE2150 | -125 | 4.6 | TATTTTCTGATAATT |
| -116 | 4.6 | ATAATTTAGAATATT | ||
| Staphylococcus haemolyticus JCSC1435 | SH0457 | -89 | 5 | AATTTTTAAAATATT |
| -80 | 4.8 | AATATTCTAAATTTT | ||
|
Position: -199
Score: 4.3 Sequence: AAATTTTAAAATATA
Position: -175
Score: 4.7 Sequence: AATTTTTAAAATTTT
Position: -68
Score: 4.6 Sequence: ACTTTTCTGAAAAAT
Locus tag: NWMN_2536
|
||||
| NWMN_2536 | -199 | 4.3 | AAATTTTAAAATATA | |
| -175 | 4.7 | AATTTTTAAAATTTT | ||
| -68 | 4.6 | ACTTTTCTGAAAAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aur | ||||
| Ortholog function: zinc metalloproteinase aureolysin | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2430 | -68 | 4.6 | ACTTTTCTGAAAAAT |
| Staphylococcus capitis SK14 | STACA0001_1850 | -30 | 4.2 | CTTTTTCAAAAATTT |
| 7 | 4.4 | ATTTTTCAAAATATG | ||
| Staphylococcus epidermidis ATCC 12228 | SE2219 | -69 | 4.9 | ACTTTTCAGAAAATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1542 | -104 | 4.3 | ATAATTCAAAATAAT |
|
Position: 4
Score: 4.4 Sequence: AATTTTTTAACTTTT
Locus tag: NWMN_2565
|
||||
| NWMN_2565 | 4 | 4.4 | AATTTTTTAACTTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: icaA | ||||
| Ortholog function: intercellular adhesion protein A | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2459 | 4 | 4.4 | AATTTTTTAACTTTT |
| Staphylococcus capitis SK14 | STACA0001_0088 | 4 | 4.4 | AATTTTTTAACTTTT |
|
Position: -142
Score: 4.6 Sequence: AATTTTCTGAAAAAG
Locus tag: NWMN_2578
|
||||
| NWMN_2578 | -142 | 4.6 | AATTTTCTGAAAAAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hisZ | ||||
| Ortholog function: ATP phosphoribosyltransferase regulatory subunit | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2472 | -142 | 4.6 | AATTTTCTGAAAAAG |
| Staphylococcus epidermidis ATCC 12228 | SE0270 | -115 | 5.1 | AATTTTCTGAAAAAT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0637 | -125 | 4.2 | ATTTTTATTAATATT |
| -116 | 5 | AATATTCAGAATTTT | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0431 | -109 | 4.8 | CATTTTCAGAATATT |