Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of CcpA regulog to Staphylococcus aureus subsp. aureus USA300_TCH1516

Reference regulog properties
Source regulog: CcpA - Staphylococcaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: HPr, phosphocarrier protein; Fructose-1,6-diphosphate
Phylum: Firmicutes
Propagated regulon:
Target genome Staphylococcus aureus subsp. aureus USA300_TCH1516
Orthologous TF(s) USA300HOU_1725
Regulated genes 76
Built upon 391 sites [see more]
Predicted regulatory interactions in Staphylococcus aureus subsp. aureus USA300_TCH1516
Locus tag Position Score Sequence
Position: -59
Score: 4.6
Sequence: ATGAAAACGTATACTT
Locus tag: USA300HOU_0008
USA300HOU_0008 -59 4.6 ATGAAAACGTATACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hutH
Ortholog function: histidine ammonia-lyase
Staphylococcus aureus subsp. aureus N315 SA0008 -59 4.6 ATGAAAACGTATACTT
Staphylococcus capitis SK14 STACA0001_1368 -57 4.6 ATGAAAACGTATACTT
Staphylococcus carnosus subsp. carnosus TM300 Sca_2466 -58 4.7 ATGTAAGCGTATACTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0008 -56 4.3 ATGTAAGCGTATACTC
Position: -50
Score: 4.6
Sequence: TTGAAAGCGTTTTATA
Locus tag: USA300HOU_0070
USA300HOU_0070 -50 4.6 TTGAAAGCGTTTTATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: arcA
Ortholog function: arginine deiminase
Staphylococcus epidermidis ATCC 12228 SE0106 -50 4.6 TTGAAAGCGTTTTATA
Staphylococcus haemolyticus JCSC1435 SH0367 -50 4.7 ATGAAAGCGCTTTATA
Position: -201
Score: 4.6
Sequence: ATTAAACCGCTTTCAT
Locus tag: USA300HOU_0122
USA300HOU_0122 -201 4.6 ATTAAACCGCTTTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: spa
Ortholog function: Immunoglobulin G binding protein A precursor
Staphylococcus aureus subsp. aureus N315 SA0107 -237 4.6 ATTAAACCGCTTTCAT
Position: -103
Score: 5
Sequence: ATGTAAACGCTTACTA
Locus tag: USA300HOU_0181
USA300HOU_0181 -103 5 ATGTAAACGCTTACTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: aldA
Ortholog function: aldehyde dehydrogenase
Staphylococcus aureus subsp. aureus N315 SA0162 -103 5 ATGTAAACGCTTACTA
Staphylococcus capitis SK14 STACA0001_0986 -85 5 AAGTAAACGTTTACAT
Staphylococcus epidermidis ATCC 12228 SE2071 -68 5.1 AaGtAAaCGCTTaCAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_2103 -113 4.3 ATGTAAACGTTTTACT
Staphylococcus haemolyticus JCSC1435 SH0547 -77 5.1 AAGTAAACGCTTACAT
Position: -98
Score: 4.6
Sequence: TTGTTAGCGTTTTCAC
Locus tag: USA300HOU_0201
USA300HOU_0201 -98 4.6 TTGTTAGCGTTTTCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ipdC
Ortholog function: indole-3-pyruvate decarboxylase homolog
Staphylococcus aureus subsp. aureus N315 SA0182 -97 4.6 TTGTTAGCGTTTTCAC
Staphylococcus carnosus subsp. carnosus TM300 Sca_2166 -52 3.8 AGGAAAGCGTTATCCT
Staphylococcus haemolyticus JCSC1435 SH0376 -41 3.9 TTGTAAGTGTATTCTA
Position: -255
Score: 4.6
Sequence: TTGAAAACGCATACTT
Locus tag: USA300HOU_0203
USA300HOU_0203 -255 4.6 TTGAAAACGCATACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glcA
Ortholog function: glucose-specific PTS enzyme IIABC
Staphylococcus aureus subsp. aureus N315 SA0183 -269 4.6 TTGAAAACGCATACTT
Staphylococcus epidermidis ATCC 12228 SE2102 -178 4.6 TTGTAAACGCTTTATT
Staphylococcus haemolyticus JCSC1435 SH0521 -171 4.6 TTGAAAACGCTTTATA
Position: -331
Score: 4.6
Sequence: AAGTATGCGTTTTCAA
Position: -63
Score: 4.8
Sequence: ATGTAAGCGATTACAC
Locus tag: USA300HOU_0204
USA300HOU_0204 -331 4.6 AAGTATGCGTTTTCAA
-63 4.8 ATGTAAGCGATTACAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA0184
Ortholog function: hypothetical protein
Staphylococcus aureus subsp. aureus N315 SA0184 -63 4.8 ATGTAAGCGATTACAC
Staphylococcus capitis SK14 STACA0001_1175 -63 4.5 TTGTAAACGTTTAATA
Staphylococcus carnosus subsp. carnosus TM300 Sca_2140 -85 5.1 ATGAAAGCGATTACAA
Staphylococcus haemolyticus JCSC1435 SH0743 -33 3.8 ATGTAAGTGATTACAG
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0596 -35 4.2 ATGAAACCGATTACAG
Position: -43
Score: 4.3
Sequence: TATTAAGCGCTTACAC
Locus tag: USA300HOU_0229
USA300HOU_0229 -43 4.3 TATTAAGCGCTTACAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: uhpT
Ortholog function: hexose phosphate transport protein
Staphylococcus aureus subsp. aureus N315 SA0214 -61 4.3 TATTAAGCGCTTACAC
Staphylococcus epidermidis ATCC 12228 SE0164 -61 4.7 TATTAAGCGCTTACAT
Position: -44
Score: 4.9
Sequence: ATGAAAACGTTAACAT
Locus tag: USA300HOU_0233
USA300HOU_0233 -44 4.9 ATGAAAACGTTAACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pflB
Ortholog function: Pyruvate formate lyase
Staphylococcus aureus subsp. aureus N315 SA0218 -59 4.9 ATGAAAACGTTAACAT
Staphylococcus epidermidis ATCC 12228 SE0214 -37 4.8 TTGAAAACGTTAACAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_2017 -58 4.3 GTGAAAACGGTAACAT
Macrococcus caseolyticus JCSC5402 MCCL_0434 -94 4.8 TTTTAAACGTTTACAT
Position: -41
Score: 4.9
Sequence: GTGTAAGCGTTTACAA
Locus tag: USA300HOU_0242
USA300HOU_0242 -41 4.9 GTGTAAGCGTTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA0225
Ortholog function: short-chain acyl-CoA oxidase
Staphylococcus aureus subsp. aureus N315 SA0225 -86 4.9 GTGTAAGCGTTTACAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_2408 -63 5.3 ATGTAAGCGTTTACAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2425 -36 4.6 ATGTAAGCGCAATCAT
Position: -49
Score: 4.6
Sequence: TTGTAAGGGTTTACAC
Locus tag: USA300HOU_0244
USA300HOU_0244 -49 4.6 TTGTAAGGGTTTACAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fadX
Ortholog function: putative acetyl-CoA transferase
Staphylococcus aureus subsp. aureus N315 SA0227 -64 4.6 TTGTAAGGGTTTACAC
Staphylococcus carnosus subsp. carnosus TM300 Sca_2406 -61 4.9 TTGTAAGGGTTTACAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2427 -91 5 ATGTAAGGGCTTACAT
Position: -107
Score: 4.3
Sequence: ATTTAAACGTTTTCAG
Position: -86
Score: 4.6
Sequence: ATGAAAACGCATGCAT
Locus tag: USA300HOU_0282
USA300HOU_0282 -107 4.3 ATTTAAACGTTTTCAG
-86 4.6 ATGAAAACGCATGCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: rbsU
Ortholog function: ribose transporter RbsU
Staphylococcus aureus subsp. aureus N315 SA0260 -86 4.6 ATGAAAACGCATGCAT
Staphylococcus capitis SK14 STACA0001_0973 -84 4 GTGTAAGCGTATACAG
Staphylococcus epidermidis ATCC 12228 SE2088 -87 4.6 GTGTAAGCGTATACAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_2421 -101 4.9 ATGAAAGCGTATACAT
Position: -93
Score: 5.3
Sequence: ATGTAAGCGTTTACAA
Locus tag: USA300HOU_0331
USA300HOU_0331 -93 5.3 ATGTAAGCGTTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA0300
Ortholog function: hypothetical protein
Staphylococcus aureus subsp. aureus N315 SA0299 -93 5.3 ATGTAAGCGTTTACAA
Staphylococcus aureus subsp. aureus N315 SA0300 -93 5.3 ATGTAAGCGTTTACAA
Position: -64
Score: 4.9
Sequence: ATGATAGCGTTTACAA
Locus tag: USA300HOU_0335
USA300HOU_0335 -64 4.9 ATGATAGCGTTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nanA
Ortholog function: N-acetylneuraminate lyase
Staphylococcus aureus subsp. aureus N315 SA0304 -64 4.9 ATGATAGCGTTTACAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_2389 -109 4.9 ATGATAGCGTTTACAA
Staphylococcus haemolyticus JCSC1435 SH0282 -108 4.9 ATGATAGCGTTTACAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0375 -182 4.6 ATGGTAGCGTTTACAA
Position: -67
Score: 4.9
Sequence: TTGTAAACGCTATCAT
Locus tag: USA300HOU_0336
USA300HOU_0336 -67 4.9 TTGTAAACGCTATCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nanK
Ortholog function: predicted N-acetyl-D-mannosamine kinase, ROK family
Staphylococcus aureus subsp. aureus N315 SA0305 -109 4.9 TTGTAAACGCTATCAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_2390 -152 4.9 TTGTAAACGCTATCAT
Staphylococcus haemolyticus JCSC1435 SH0281 -150 4.9 TTGTAAACGCTATCAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0374 -157 4.6 TTGTAAACGCTACCAT
Position: -76
Score: 4.8
Sequence: TTGACAACGCTTTCAT
Locus tag: USA300HOU_0357
USA300HOU_0357 -76 4.8 TTGACAACGCTTTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpT
Ortholog function: glycerol-3-phosphate transporter
Staphylococcus aureus subsp. aureus N315 SA0325 -76 4.8 TTGACAACGCTTTCAT
Staphylococcus epidermidis ATCC 12228 SE2047 -85 4.5 TTGACAACGCTTACTT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1820 -70 4.3 ATGGAAGCGTTGTCTT
Macrococcus caseolyticus JCSC5402 MCCL_0370 -82 4.7 TTGTAAAGGCTTTCTT
Position: -68
Score: 4.9
Sequence: TTGAAAGCCTTTACAT
Locus tag: USA300HOU_0474
USA300HOU_0474 -68 4.9 TTGAAAGCCTTTACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: treP
Ortholog function: phosphotransferase system trehalose-specific enzyme IIBC component homolog
Staphylococcus aureus subsp. aureus N315 SA0432 -68 4.9 TTGAAAGCCTTTACAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0108 -71 4.9 TTGAAAGCCTTTACAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0109 -71 4.9 TTGAAAGCCTTTACAT
Staphylococcus haemolyticus JCSC1435 SH2538 -69 4.9 ATGAAAGCCTTTACAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2282 -81 4.9 ATGAAAACCTTTACAA
Macrococcus caseolyticus JCSC5402 MCCL_1938 -49 4.4 TTGAAAACCCTTTCAG
Position: -63
Score: 4.4
Sequence: ATGTTAGCCCTTCCAT
Locus tag: USA300HOU_0514
USA300HOU_0514 -63 4.4 ATGTTAGCCCTTCCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nupC
Ortholog function: pyrimidine nucleoside transporter
Staphylococcus aureus subsp. aureus N315 SA0479 -63 4.4 ATGTTAGCCCTTCCAT
Staphylococcus capitis SK14 STACA0001_0514 -61 4.3 ATGTTAGCGCGTTCAT
Staphylococcus epidermidis ATCC 12228 SE0283 -63 4.2 ATGTTAGCGTGTTCAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2235 -65 4.2 ATGTAAGTGCTATCAA
Macrococcus caseolyticus JCSC5402 MCCL_1890 -70 4 TGTTTAGCGCTTTCAT
Position: -79
Score: 4.6
Sequence: ATGATAAGGCTTTCAA
Locus tag: USA300HOU_0543
USA300HOU_0543 -79 4.6 ATGATAAGGCTTTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: kbl
Ortholog function: 2-amino-3-ketobutyrate coenzyme A ligase
Staphylococcus aureus subsp. aureus N315 SA0508 -79 4.6 ATGATAAGGCTTTCAA
Staphylococcus capitis SK14 STACA0001_0483 -73 4.6 ATGATAAGGCTTTCAT
Staphylococcus haemolyticus JCSC1435 SH2457 -74 4.3 ATGATAGTGCTTTCAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2205 -100 4.8 TAGAAAACGCTTTCTA
Position: -50
Score: 4.7
Sequence: AAGAAAACGCTTGCAA
Locus tag: USA300HOU_0545
USA300HOU_0545 -50 4.7 AAGAAAACGCTTGCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: araB
Ortholog function: putative L-ribulokinase
Staphylococcus aureus subsp. aureus N315 SA0510 -53 4.7 AAGAAAACGCTTGCAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2178 -149 5 TAGTAAACGCTTACAT
-38 4.5 AGGAAAGCGTTTTCTT
Position: -97
Score: 4.4
Sequence: AAGAAAGCGCTTTTAT
Locus tag: USA300HOU_0546
USA300HOU_0546 -97 4.4 AAGAAAGCGCTTTTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA0511
Ortholog function: uncharacterized epimerase/dehydratase
Staphylococcus aureus subsp. aureus N315 SA0511 -97 4.4 AAGAAAGCGCTTTTAT
Staphylococcus capitis SK14 STACA0001_0477 -98 4.4 AAGAAAGCGCTTTTAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0213 -144 4.4 ATGTAAGCGCTTTACT
Staphylococcus haemolyticus JCSC1435 SH2450 -101 4.4 AAGAAAGCGCTTTTAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2164 -164 4.3 TTGAAATCGCAATCAA
-98 3.9 AATAAAGCGTTTTTAT
Macrococcus caseolyticus JCSC5402 MCCL_1856 -94 4.3 ATGTAAGCGTTTCTAA
Position: -61
Score: 4.6
Sequence: ATGATAGCGCATTCAT
Locus tag: USA300HOU_0671
USA300HOU_0671 -61 4.6 ATGATAGCGCATTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: dhaK
Ortholog function: dihydroxyacetone kinase, DhaK subunit
Staphylococcus aureus subsp. aureus N315 SA0605 -64 4.6 ATGATAGCGCATTCAT
Staphylococcus epidermidis ATCC 12228 SE0236 -146 4.6 TTGAAAGCGTATACTA
Staphylococcus haemolyticus JCSC1435 SH2244 -64 4.6 ATGATAGCGCATACAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2070 -67 4.2 ATATTAGCGTTTACAT
Position: -43
Score: 4
Sequence: GTGAAAGCGTACTCAT
Locus tag: USA300HOU_0721
USA300HOU_0721 -43 4 GTGAAAGCGTACTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fruR
Ortholog function: transcription repressor of fructose operon, DeoR family
Staphylococcus aureus subsp. aureus N315 SA0653 -43 4 GTGAAAGCGTACTCAT
Staphylococcus capitis SK14 STACA0001_0331 -46 4.3 ATGTAAGCGCACTCAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0346 -44 4.3 ATGTAAGCGGAAACAT
Staphylococcus haemolyticus JCSC1435 SH2196 -45 4.3 ATGTAAGCGTACACAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2019 -44 4.3 AAGAAAGCGTAAACAT
Macrococcus caseolyticus JCSC5402 MCCL_0452 -28 3.9 ATGAAAGTGTTCACAA
Position: -152
Score: 5
Sequence: ATGTAAGCGTTTACTA
Locus tag: USA300HOU_0840
USA300HOU_0840 -152 5 ATGTAAGCGTTTACTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yusH
Ortholog function: hypothetical protein
Staphylococcus aureus subsp. aureus N315 SA0760 -152 5 ATGTAAACGTTTACTA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1869 -124 4 ATGAAAACGCTTTACC
Position: -150
Score: 4.9
Sequence: ATGTAAGGGTTTTCAA
Locus tag: USA300HOU_0916
USA300HOU_0916 -150 4.9 ATGTAAGGGTTTTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rocD
Ortholog function: ornithine aminotransferase
Staphylococcus aureus subsp. aureus N315 SA0818 -150 4.9 ATGTAAGGGTTTTCAA
Staphylococcus capitis SK14 STACA0001_0169 -184 4.9 TTGTAAGGGCTTTCAA
Staphylococcus epidermidis ATCC 12228 SE0653 -180 5 ATGTAAGGGCTTACAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0565 -49 4.8 ATGTAAGGGCTTTCTT
Staphylococcus haemolyticus JCSC1435 SH1993 -161 4.5 CTGTAAGGGCTTTCAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1818 -198 5 ATGTAAGGGCTTACAT
Macrococcus caseolyticus JCSC5402 MCCL_0583 -44 4.7 ATGTAAGGGTTTTCTA
Position: -84
Score: 4.5
Sequence: TTGTAAGGGCTTTAAA
Position: -42
Score: 4.3
Sequence: TTGAAAGCGAAATCAT
Locus tag: USA300HOU_0917
USA300HOU_0917 -84 4.5 TTGTAAGGGCTTTAAA
-42 4.3 TTGAAAGCGAAATCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gudB
Ortholog function: NAD-specific glutamate dehydrogenase
Staphylococcus aureus subsp. aureus N315 SA0819 -84 4.5 TTGTAAGGGCTTTAAA
-42 4.3 TTGAAAGCGAAATCAT
Staphylococcus capitis SK14 STACA0001_0168 -84 4.5 TTGTAAACCCTTTAAA
-41 4.3 TTGAAAGCGAAATCAT
Staphylococcus epidermidis ATCC 12228 SE0654 -74 4.1 TTTAAAATGCTTTCAA
-41 4.3 ATGAAAGCGAAATCAT
Staphylococcus haemolyticus JCSC1435 SH1992 -77 4.5 TTGAAAACCCTTTAAA
-35 4.3 ATGAAAGCGAAATCAT
Macrococcus caseolyticus JCSC5402 MCCL_0584 -93 4.6 TTGGTAGCGTTTTCAA
Position: -62
Score: 4.6
Sequence: ATGTAACGGTTTTCAA
Locus tag: USA300HOU_0973
USA300HOU_0973 -62 4.6 ATGTAACGGTTTTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA0873
Ortholog function: DJ-1/PfpI family protein
Staphylococcus aureus subsp. aureus N315 SA0873 -62 4.6 ATGTAACGGTTTTCAA
Staphylococcus capitis SK14 STACA0001_0121 -62 4.4 AAGTAACGGTTTTCAA
Staphylococcus epidermidis ATCC 12228 SE0715 -62 4.4 AAGTAACGGTTTTCAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_0617 -64 4.4 TTGGTAACGATTTCAT
Staphylococcus haemolyticus JCSC1435 SH1944 -93 4.9 TTGTAAACCTTTTCAA
Position: -235
Score: 4.4
Sequence: GTGGAAGCGTTTTCTA
Locus tag: USA300HOU_1083
USA300HOU_1083 -235 4.4 GTGGAAGCGTTTTCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: sdhC
Ortholog function: succinate dehydrogenase cytochrome b subunit
Staphylococcus aureus subsp. aureus N315 SA0994 -235 4.4 GTGGAAGCGTTTTCTA
Staphylococcus capitis SK14 STACA0001_2159 -286 4.4 GTGGAAGCGTTTTCTA
Staphylococcus epidermidis ATCC 12228 SE0840 -270 4.7 ATGGAAGCGTTTTCTA
Staphylococcus carnosus subsp. carnosus TM300 Sca_0765 -291 5 TTGTAAACGCTTTCTA
Staphylococcus haemolyticus JCSC1435 SH1814 -285 4.7 ATGGAAGCGTTTTCTA
-61 4 TTGAAAAGACTTTCTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1648 -232 4.7 ATGGAAGCGTTTTCTA
Macrococcus caseolyticus JCSC5402 MCCL_1319 -85 4.5 ATGTAATCGGTTTCTT
Position: -334
Score: 4.8
Sequence: TTGTAATCGATTACAT
Locus tag: USA300HOU_1099
USA300HOU_1099 -334 4.8 TTGTAATCGATTACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hla
Ortholog function: Alpha-Hemolysin
Staphylococcus aureus subsp. aureus N315 SA1007 -334 4.8 TTGTAATCGATTACAT
Position: -133
Score: 4.8
Sequence: TTGACAACGCTTTCAT
Locus tag: USA300HOU_1230
USA300HOU_1230 -133 4.8 TTGACAACGCTTTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpF
Ortholog function: glycerol uptake facilitator
Staphylococcus aureus subsp. aureus N315 SA1140 -133 4.8 TTGACAACGCTTTCAT
Staphylococcus capitis SK14 STACA0001_1544 -132 4.7 TTGACAACGCTTACAA
Staphylococcus epidermidis ATCC 12228 SE0977 -130 4.7 TTGACAACGCTTACAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_0948 -126 4.8 TTGACAACGCTTTCAT
Staphylococcus haemolyticus JCSC1435 SH1614 -128 4.7 TTGACAACGCTTACAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1461 -145 4.7 TTGACAACGCTTACAA
Macrococcus caseolyticus JCSC5402 MCCL_0891 -133 4.7 TTGACAACGTTTACAT
Position: -42
Score: 4.4
Sequence: GTGAAAGCGCTTGCTT
Locus tag: USA300HOU_1270
USA300HOU_1270 -42 4.4 GTGAAAGCGCTTGCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA1162
Ortholog function: hypothetical protein
Staphylococcus aureus subsp. aureus N315 SA1162 -27 4.4 GTGAAAGCGCTTGCTT
Staphylococcus capitis SK14 STACA0001_1569 -30 4.8 ATGAAAGCGCTTGCTT
Staphylococcus epidermidis ATCC 12228 SE1007 -29 4.4 GTGAAAGCGCTTGCTA
Staphylococcus carnosus subsp. carnosus TM300 Sca_0968 -30 4.7 TTGTAAGCGCTTACTC
Staphylococcus haemolyticus JCSC1435 SH1581 -29 4.8 ATGAAAGCGTTTCCTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1440 -33 4.7 TTGGAAACGCTTACTT
Position: -103
Score: 4.4
Sequence: AATTAAGCGTTTTCTA
Locus tag: USA300HOU_1283
USA300HOU_1283 -103 4.4 AATTAAGCGTTTTCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: citB
Ortholog function: aconitate hydratase
Staphylococcus aureus subsp. aureus N315 SA1184 -103 4.4 AATTAAGCGTTTTCTA
Staphylococcus capitis SK14 STACA0001_1597 -103 4.4 AATAAAGCGTTTTCTA
Staphylococcus epidermidis ATCC 12228 SE1032 -103 4.4 AATAAAGCGTTTTCTA
Staphylococcus carnosus subsp. carnosus TM300 Sca_0991 -68 4.5 TTGTAATCCCTTACTT
Macrococcus caseolyticus JCSC5402 MCCL_1008 -36 4 ATGTAAAGGCTTTATC
Position: -43
Score: 4.4
Sequence: TTGGAAGCGTTTTCCA
Locus tag: USA300HOU_1510
USA300HOU_1510 -43 4.4 TTGGAAGCGTTTTCCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: malR
Ortholog function: maltose operon transcriptional repressor
Staphylococcus aureus subsp. aureus N315 SA1339 -43 4.4 TTGGAAGCGTTTTCCA
Staphylococcus haemolyticus JCSC1435 SH1407 -159 5 TTGAAAGCGTTTACTA
Macrococcus caseolyticus JCSC5402 MCCL_0356 -43 5 ATGAAAACGTTTTCTT
Position: -50
Score: 4.5
Sequence: ATGAAAAGGTATTCAA
Locus tag: USA300HOU_1609
USA300HOU_1609 -50 4.5 ATGAAAAGGTATTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA1437
Ortholog function: allophanate hydrolase subunit 1
Staphylococcus aureus subsp. aureus N315 SA1437 -50 4.5 ATGAAAAGGTATTCAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_2042 -292 4.7 ATGGAAAGGCTTACAT
Staphylococcus haemolyticus JCSC1435 SH1310 -189 4.8 AAGTAAGCGATTACAT
Position: -43
Score: 4.7
Sequence: TTGAAAGCCATTTCAT
Locus tag: USA300HOU_1682
USA300HOU_1682 -43 4.7 TTGAAAGCCATTTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: citZ
Ortholog function: citrate synthase
Staphylococcus aureus subsp. aureus N315 SA1518 -43 4.7 TTGAAAGCCATTTCAT
Staphylococcus capitis SK14 STACA0001_0589 -43 4.4 GTGAAAGCCATTTCAT
Staphylococcus epidermidis ATCC 12228 SE1371 -43 4.7 TTGAAAGCCATTTCAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1301 -42 4.7 ATGAAAGCCATTTCAA
Staphylococcus haemolyticus JCSC1435 SH1230 -42 4.4 TTGGAAGCCATTACAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1071 -42 4.8 ATGAAAGCCATTTCAT
Macrococcus caseolyticus JCSC5402 MCCL_1362 0 4.4 GTGAAAGCCATTACAT
Position: -106
Score: 4.8
Sequence: TTTAAAACGTTTACAT
Locus tag: USA300HOU_1685
USA300HOU_1685 -106 4.8 TTTAAAACGTTTACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pfkA
Ortholog function: 6-phosphofructokinase
Staphylococcus aureus subsp. aureus N315 SA1521 -151 4.8 TTTAAAACGTTTACAT
Staphylococcus capitis SK14 STACA0001_0592 -107 4.8 TTTAAAACGTTTACAT
Staphylococcus epidermidis ATCC 12228 SE1374 -152 4.8 TTTAAAACGTTTACAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1304 -103 4.6 TATAAAACGTTTACAT
Staphylococcus haemolyticus JCSC1435 SH1226 -152 4.6 TATAAAACGTTTACAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1068 -148 4.8 TTTAAAACGTTTACAT
Macrococcus caseolyticus JCSC5402 MCCL_1365 -100 4.8 TTTAAAACGTTTTCAT
Position: -52
Score: 4.5
Sequence: TTGATTGCGCTTTCAA
Locus tag: USA300HOU_1696
USA300HOU_1696 -52 4.5 TTGATTGCGCTTTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ald
Ortholog function: alanine dehydrogenase
Staphylococcus aureus subsp. aureus N315 SA1531 -52 4.5 TTGATTGCGCTTTCAA
Staphylococcus capitis SK14 STACA0001_0602 -52 4.6 ATGATTGCGCTTTCAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_1314 -54 4.6 ATGATTGCGCTTTCAT
Staphylococcus haemolyticus JCSC1435 SH1216 -52 4.1 CTGATTGCGCTTTCAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1057 -52 4.6 TTGATTGCGCTTTCAT
Position: -97
Score: 4.1
Sequence: ATGAAAGCGCTAACCC
Locus tag: USA300HOU_1721
USA300HOU_1721 -97 4.1 ATGAAAGCGCTAACCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fhs
Ortholog function: formyltetrahydrofolate synthetase
Staphylococcus aureus subsp. aureus N315 SA1553 -130 4.1 ATGAAAGCGCTAACCC
Staphylococcus haemolyticus JCSC1435 SH1190 -138 4.3 TTGGAAACGCTCTCAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1032 -147 4.4 TTGAAAGCGCTATCTC
Position: -37
Score: 4.7
Sequence: AAGAAAGCGTTTTCAC
Locus tag: USA300HOU_1722
USA300HOU_1722 -37 4.7 AAGAAAGCGTTTTCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: acsA
Ortholog function: acetyl-CoA synthetase
Staphylococcus aureus subsp. aureus N315 SA1554 -37 4.7 AAGAAAGCGTTTTCAC
Staphylococcus capitis SK14 STACA0001_0626 -35 4.9 AAGAAAGCGATTTCAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1338 -34 5 ATGAAAACGATTTCAA
Staphylococcus haemolyticus JCSC1435 SH1189 -36 4.9 AAGAAAGCGATTTCAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1030 -33 4.5 AAGCAAGCGATTTCAT
Macrococcus caseolyticus JCSC5402 MCCL_1409 0 4.7 ATGAAAACGATTACAC
Position: -147
Score: 4.7
Sequence: GTGAAAACGCTTTCTT
Locus tag: USA300HOU_1723
USA300HOU_1723 -147 4.7 GTGAAAACGCTTTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: acuA
Ortholog function: acetoin utilization protein AcuA
Staphylococcus aureus subsp. aureus N315 SA1555 -147 4.7 GTGAAAACGCTTTCTT
Staphylococcus capitis SK14 STACA0001_0627 -154 4.9 ATGAAATCGCTTTCTT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1339 -213 5 TTGAAATCGTTTTCAT
Staphylococcus haemolyticus JCSC1435 SH1188 -144 4.9 ATGAAATCGCTTTCTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1029 -162 4.5 ATGAAATCGCTTGCTT
Position: -26
Score: 4.6
Sequence: AATAAAACGTTTACAA
Locus tag: USA300HOU_1725
USA300HOU_1725 -26 4.6 AATAAAACGTTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ccpA
Ortholog function: catabolite control protein A
Staphylococcus aureus subsp. aureus N315 SA1557 -71 4.6 AATAAAACGTTTACAA
Staphylococcus capitis SK14 STACA0001_0629 -26 4.3 AATGAAACGCTTACAA
Staphylococcus epidermidis ATCC 12228 SE1409 -71 4.6 AATAAAACGTTTACAA
Staphylococcus haemolyticus JCSC1435 SH1186 -26 4.6 AATAAAACGCTTACAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1027 -26 4.8 AAGAAATCGTTTTCAA
Macrococcus caseolyticus JCSC5402 MCCL_1413 -25 4.1 AATAAAACGTTTTCAG
Position: -71
Score: 4.7
Sequence: ATGAAAACGCTTTCTC
Locus tag: USA300HOU_1756
USA300HOU_1756 -71 4.7 ATGAAAACGCTTTCTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: putA
Ortholog function: proline dehydrogenase
Staphylococcus aureus subsp. aureus N315 SA1585 -71 4.7 ATGAAAACGCTTTCTC
Staphylococcus capitis SK14 STACA0001_0658 -81 4.7 ATGTAAACGCTTTCTC
Staphylococcus epidermidis ATCC 12228 SE1437 -80 5.1 ATGTAAACGCTTTCTT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1371 -71 4.9 TTGTTAACGTTTTCAT
Staphylococcus haemolyticus JCSC1435 SH1157 -81 5 TTGAAAACGCTTTCTA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0999 -80 5 TTGTAAACGATTTCAT
Macrococcus caseolyticus JCSC5402 MCCL_1451 -52 4.9 TTTAAAGCGTTTTCAT
Position: -44
Score: 5
Sequence: ATGTAAAGGCTTACAT
Locus tag: USA300HOU_1778
USA300HOU_1778 -44 5 ATGTAAAGGCTTACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pckA
Ortholog function: phosphoenolpyruvate carboxykinase
Staphylococcus aureus subsp. aureus N315 SA1609 -44 5 ATGTAAAGGCTTACAT
Staphylococcus capitis SK14 STACA0001_0678 -44 5 ATGTAAAGGCTTACAT
Staphylococcus epidermidis ATCC 12228 SE1459 -41 5 ATGTAAGGGCTTACAT
Staphylococcus haemolyticus JCSC1435 SH1137 -53 4.9 ATGTAAAGGCTTACAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0975 -43 4.9 TTGTAAAGGCTTACAT
Position: -38
Score: 5.2
Sequence: TTGTAAACGTTTACAA
Locus tag: USA300HOU_1807
USA300HOU_1807 -38 5.2 TTGTAAACGTTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA1633
Ortholog function: beta-lactamase
Staphylococcus aureus subsp. aureus N315 SA1633 -38 5.2 TTGTAAACGTTTACAA
Position: -137
Score: 4.4
Sequence: ACGAAAGCGCTTTCTA
Locus tag: USA300HOU_1903
USA300HOU_1903 -137 4.4 ACGAAAGCGCTTTCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: putP
Ortholog function: high affinity proline permease
Staphylococcus aureus subsp. aureus N315 SA1718 -137 4.1 ACGAAAGCGCTTCCTA
Staphylococcus capitis SK14 STACA0001_1955 -134 4.5 GAGTAAGCGCTTTCTA
Staphylococcus carnosus subsp. carnosus TM300 Sca_1474 -137 4.3 ATGTAAACGCTTTACT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0889 -137 4.1 ATGGAAGCGCTTAACA
Position: -162
Score: 4.9
Sequence: TTGAAAGCGCATTCAT
Locus tag: USA300HOU_1918
USA300HOU_1918 -162 4.9 TTGAAAGCGCATTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sdcS
Ortholog function: sodium-dependent dicarboxylate transporter
Staphylococcus aureus subsp. aureus N315 SA1732 -162 4.9 TTGAAAGCGCATTCAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1495 -138 4.9 ATGTATACGTTTACAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0875 -100 4.6 ATGTAAACGATTTAAA
Position: -65
Score: 4.3
Sequence: TTTAAAGCGGTTACAC
Locus tag: USA300HOU_2039
USA300HOU_2039 -65 4.3 TTTAAAGCGGTTACAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: scrR
Ortholog function: sucrose operon repressor
Staphylococcus aureus subsp. aureus N315 SA1847 -65 4.3 TTTAAAGCGGTTACAC
Staphylococcus capitis SK14 STACA0001_2124 -67 4.7 TTTAAAGCGATTACAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0836 -68 4.4 TTTAAAGCGATTCCAT
Position: -142
Score: 4.5
Sequence: ATGTATACGTTTGCAT
Locus tag: USA300HOU_2113
USA300HOU_2113 -142 4.5 ATGTATACGTTTGCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fbaA
Ortholog function: fructose-bisphosphate aldolase
Staphylococcus aureus subsp. aureus N315 SA1927 -142 4.5 ATGTATACGTTTGCAT
Staphylococcus capitis SK14 STACA0001_0829 -144 4.3 ATGAATGCGGTTGCAA
Staphylococcus epidermidis ATCC 12228 SE1723 -143 4.4 ATGTATTCGCTTCCAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_1628 -143 4.8 TTGAATACGTTTTCAT
-102 4.3 TTAAAACCGCTTACAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0759 -101 4.6 ATAAAAACGCTTACAA
Position: -116
Score: 4.6
Sequence: ATGTATGCGGTTACAT
Locus tag: USA300HOU_2126
USA300HOU_2126 -116 4.6 ATGTATGCGGTTACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: dra2
Ortholog function: deoxyribose-phosphate aldolase paralog
Staphylococcus aureus subsp. aureus N315 SA1939 -115 4.6 ATGTATGCGGTTACAT
Position: -51
Score: 4.3
Sequence: TGGTAAGCGCATACAT
Locus tag: USA300HOU_2154
USA300HOU_2154 -51 4.3 TGGTAAGCGCATACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: arg
Ortholog function: arginase
Staphylococcus aureus subsp. aureus N315 SA1968 -51 4.3 TGGTAAGCGCATACAT
Staphylococcus capitis SK14 STACA0001_0865 -51 4.6 ATGCAAGCGTATACAT
Position: -128
Score: 5
Sequence: TTGTAATCGTTTTCAA
Locus tag: USA300HOU_2163
USA300HOU_2163 -128 5 TTGTAATCGTTTTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA1975
Ortholog function: predicted membrane-bound hydrolase
Staphylococcus aureus subsp. aureus N315 SA1975 -128 5 TTGTAATCGTTTTCAA
Staphylococcus capitis SK14 STACA0001_1306 -131 5 TTGAAATCGTTTTCAA
Staphylococcus epidermidis ATCC 12228 SE1762 -130 4.7 GTGTAATCGTTTTCAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_1672 -141 5 TAGAAAACGTTTTCAA
Staphylococcus haemolyticus JCSC1435 SH0869 -129 4.7 GTGTAATCGTTTTCAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0715 -128 4.6 TTGCAATCGTTTTCAA
Position: -64
Score: 5
Sequence: TTGAAAACGATTACAA
Locus tag: USA300HOU_2164
USA300HOU_2164 -64 5 TTGAAAACGATTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SAS074
Ortholog function: hypothetical protein
Staphylococcus aureus subsp. aureus N315 SAS074 -64 5 TTGAAAACGATTACAA
Staphylococcus capitis SK14 STACA0001_1305 -62 5 TTGAAAACGATTTCAA
Staphylococcus epidermidis ATCC 12228 SE1763 -62 4.7 TTGAAAACGATTACAC
-15 4 AAGGAAGTGTTTTCAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_1673 -64 5 TTGAAAACGTTTTCTA
Staphylococcus haemolyticus JCSC1435 SH0868 -63 4.7 TTGAAAACGATTACAC
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0714 -64 4.6 TTGAAAACGATTGCAA
Position: -117
Score: 4.7
Sequence: ATGTAAGCGTTTTCCA
Locus tag: USA300HOU_2294
USA300HOU_2294 -117 4.7 ATGTAAGCGTTTTCCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA2105
Ortholog function: hypothetical protein
Staphylococcus aureus subsp. aureus N315 SA2105 -117 4.7 ATGTAAGCGTTTTCCA
Staphylococcus capitis SK14 STACA0001_1178 -131 5 TTGTAAGCGTTTTCTA
Staphylococcus epidermidis ATCC 12228 SE1885 -130 5 TTGTAAGCGTTTTCTA
Staphylococcus carnosus subsp. carnosus TM300 Sca_1807 -119 5.1 ATGTAAGCGTTTACTT
Staphylococcus haemolyticus JCSC1435 SH0745 -127 4.7 TTGTAAGCGTTTTCCT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0598 -109 5.1 ATGTAAGCGTTTTCTT
Position: -122
Score: 4.2
Sequence: CTGTAAACGATTGCAT
Locus tag: USA300HOU_2299
USA300HOU_2299 -122 4.2 CTGTAAACGATTGCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA2109
Ortholog function: probable amino-acid or metabolite transporter
Staphylococcus aureus subsp. aureus N315 SA2109 -122 4.2 CTGTAAACGATTGCAT
Staphylococcus capitis SK14 STACA0001_1171 -119 4.5 GTGTAATCGATTTCAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1812 -249 5 ATGAAAGCGCATACAT
Staphylococcus haemolyticus JCSC1435 SH0739 -173 4.8 ATGGAAGCGATTTCAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0591 -114 5 ATGTAAACCCTTACAT
Macrococcus caseolyticus JCSC5402 MCCL_0079 -103 4.3 GTGAAAACGTTTTCGT
Position: -104
Score: 4.7
Sequence: GTGTAAGCGTTTACTA
Locus tag: USA300HOU_2303
USA300HOU_2303 -104 4.7 GTGTAAGCGTTTACTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glvC
Ortholog function: maltose-specific enzyme IICB of PTS system
Staphylococcus aureus subsp. aureus N315 SA2114 -104 4.7 GTGTAAGCGTTTACTA
Staphylococcus capitis SK14 STACA0001_1166 -113 5 ATGTAAGCGTTTACTA
Staphylococcus epidermidis ATCC 12228 SE1897 -104 5 ATGTAAGCGTTTACTA
Staphylococcus haemolyticus JCSC1435 SH0732 -121 4.7 GTGTAAGCGTTTACTA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0583 -117 4.8 ATGTAAGCGTTTCCTT
Position: -241
Score: 4.7
Sequence: TAGTAAACGCTTACAC
Locus tag: USA300HOU_2304
USA300HOU_2304 -241 4.7 TAGTAAACGCTTACAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: glvR
Ortholog function: transcriptional regulator of maltose utilization, RpiR family
Staphylococcus aureus subsp. aureus N315 SA2115 -241 4.7 TAGTAAACGCTTACAC
Staphylococcus capitis SK14 STACA0001_1165 -115 5 TAGTAAACGCTTACAT
Staphylococcus epidermidis ATCC 12228 SE1898 -109 5 TAGTAAACGCTTACAT
Staphylococcus haemolyticus JCSC1435 SH0731 -142 4.3 ATAAAAGCGTTTTCTT
-115 4.7 TAGTAAACGCTTACAC
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0582 -113 4.8 AAGGAAACGCTTACAT
Position: -57
Score: 4.9
Sequence: ATGTAAGCGTTTTAAA
Locus tag: USA300HOU_2311
USA300HOU_2311 -57 4.9 ATGTAAGCGTTTTAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hutU
Ortholog function: urocanate hydratase
Staphylococcus aureus subsp. aureus N315 SA2122 -57 4.9 ATGTAAGCGTTTTAAA
Position: -64
Score: 4.5
Sequence: TTTATAACGCTTACAT
Locus tag: USA300HOU_2326
USA300HOU_2326 -64 4.5 TTTATAACGCTTACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gltS
Ortholog function: sodium/glutamate symporter
Staphylococcus aureus subsp. aureus N315 SA2135 -64 4.5 TTTATAACGCTTACAT
Staphylococcus capitis SK14 STACA0001_1139 -75 4.5 TTTATAACGCTTACAT
Staphylococcus epidermidis ATCC 12228 SE1924 -71 4.1 TTTATAAGGTTTACAT
Staphylococcus haemolyticus JCSC1435 SH0713 -64 4.5 TTTATAGCGCTTACAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0557 -74 5 TTGTAAACGTTTACTT
Position: -127
Score: 4.6
Sequence: ATGAATGCGCTATCAA
Position: -61
Score: 4.4
Sequence: TTGGAACCGGTTACAA
Locus tag: USA300HOU_2362
USA300HOU_2362 -127 4.6 ATGAATGCGCTATCAA
-61 4.4 TTGGAACCGGTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: scrA
Ortholog function: PTS system, sucrose-specific IIBC component
Staphylococcus aureus subsp. aureus N315 SA2167 -127 4.6 ATGAATGCGCTATCAA
-61 4.4 TTGGAACCGGTTACAA
Staphylococcus capitis SK14 STACA0001_1097 -63 4.4 TTGGAACCGGTTACAA
-34 4.2 ATGGAACCGGTTTCTA
Staphylococcus epidermidis ATCC 12228 SE1959 -58 4.4 TTGGAACCGGTTACAA
Staphylococcus haemolyticus JCSC1435 SH0671 -63 4.4 TTGGAACCGGTTACAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0512 -66 4.4 TTGGAACCGGTTACAA
Position: -54
Score: 4.7
Sequence: AAGAAAACGCTTACAC
Locus tag: USA300HOU_2424
USA300HOU_2424 -54 4.7 AAGAAAACGCTTACAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: aapA
Ortholog function: D-serine/D-alanine/glycine transporter
Staphylococcus aureus subsp. aureus N315 SA2226 -54 4.7 AAGAAAACGCTTACAC
Staphylococcus aureus subsp. aureus N315 SA2227 -54 4.7 AAGAAAACGCTTACAC
Staphylococcus capitis SK14 STACA0001_1050 -45 5.1 AAGAAAACGCTTTCAT
Staphylococcus epidermidis ATCC 12228 SE2004 -41 5.1 AAGTAAACGCTTTCAT
Staphylococcus haemolyticus JCSC1435 SH0623 -61 5 AAGAAAGCGTTTACAA
Position: -80
Score: 4.7
Sequence: AAGAAAGCGCTTGCAA
Locus tag: USA300HOU_2494
USA300HOU_2494 -80 4.7 AAGAAAGCGCTTGCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gntR
Ortholog function: gluconate operon transcriptional repressor
Staphylococcus aureus subsp. aureus N315 SA2295 -79 4.7 AAGAAAGCGCTTGCAA
Staphylococcus capitis SK14 STACA0001_1009 -83 4.7 AAGAAAGCGCTTGCAA
Staphylococcus epidermidis ATCC 12228 SE2046 -83 4.7 AAGAAAGCGCTTGCAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_1950 -53 4.7 ATGTAAGCGGTTGCAA
Staphylococcus haemolyticus JCSC1435 SH0574 -81 4.7 AAGAAAGCGTTTGCAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0410 -83 4.6 TTGCAAGCGCTTGCAA
Macrococcus caseolyticus JCSC5402 MCCL_0405 -325 4.6 AcGAAAGCGtTTaCAa
Position: -148
Score: 4.7
Sequence: TTGTAAACGCTTTCCA
Locus tag: USA300HOU_2499
USA300HOU_2499 -148 4.7 TTGTAAACGCTTTCCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gudP
Ortholog function: glucarate transporter
Staphylococcus aureus subsp. aureus N315 SA2300 -148 4.7 TTGTAAACGCTTTCCA
Staphylococcus capitis SK14 STACA0001_1003 -166 4 TTGTAACCGTTTTCGC
Staphylococcus epidermidis ATCC 12228 SE2056 -164 4.6 TTGTAACCGTTTACAC
Staphylococcus carnosus subsp. carnosus TM300 Sca_1960 -94 4.7 TTGTAAACGATTTCTA
Staphylococcus haemolyticus JCSC1435 SH0566 -241 5 TTGAAAACGATTTCAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0401 -86 5.1 TTGTAAGCGATTTCAT
Macrococcus caseolyticus JCSC5402 MCCL_1800 -82 4.8 TTGTAATCGATTTCAT
Position: -83
Score: 4.7
Sequence: ATGTTAACGTTTTCTT
Position: -59
Score: 4.2
Sequence: TTGTAAGCGCATTTAT
Locus tag: USA300HOU_2505
USA300HOU_2505 -83 4.7 ATGTTAACGTTTTCTT
-59 4.2 TTGTAAGCGCATTTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fbp
Ortholog function: fructose-bisphosphatase
Staphylococcus aureus subsp. aureus N315 SA2304 -83 4.7 ATGTTAACGTTTTCTT
Staphylococcus capitis SK14 STACA0001_0995 -66 4 ATGTAAGCGCATTACT
Staphylococcus epidermidis ATCC 12228 SE2063 -66 4.3 ATGTAAGCGCATTATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1964 -123 4.8 TTGAAATCGTTTACTT
Staphylococcus haemolyticus JCSC1435 SH0559 -64 4.3 ATGTAAGCGGTTTTAT
Position: -76
Score: 5
Sequence: TTGAAAACGTTTTCTT
Locus tag: USA300HOU_2523
USA300HOU_2523 -76 5 TTGAAAACGTTTTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pfoR
Ortholog function: putative PTS transporter
Staphylococcus aureus subsp. aureus N315 SA2320 -76 5 TTGAAAACGTTTTCTT
Staphylococcus capitis SK14 STACA0001_0978 -221 4.2 ATAATAGCGTTTACAT
-68 4.8 TTGAAATCGCTTTCTT
Staphylococcus epidermidis ATCC 12228 SE2082 -68 4.8 TTGAAATCGCTTTCTT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1981 -79 4.3 TTGAAAACGCTTTACT
Staphylococcus haemolyticus JCSC1435 SH0537 -270 4.9 TTGAAAAGGTTTACAA
-116 4.8 TTGAAATCGTTTTCTT
Position: -146
Score: 4.9
Sequence: TTGTAAGCGTTTTAAT
Locus tag: USA300HOU_2539
USA300HOU_2539 -146 4.9 TTGTAAGCGTTTTAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: mvaA
Ortholog function: hydroxymethylglutaryl-CoA reductase
Staphylococcus aureus subsp. aureus N315 SA2333 -147 4.9 TTGTAAGCGTTTTAAT
Staphylococcus capitis SK14 STACA0001_0951 -137 4.3 ATGTAAGCGTTTTACA
Staphylococcus epidermidis ATCC 12228 SE2109 -137 4.3 ATGTAAGCGCTTTACA
Position: -123
Score: 4.9
Sequence: ATTAAAACGCTTACAA
Locus tag: USA300HOU_2540
USA300HOU_2540 -123 4.9 ATTAAAACGCTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: mvaS
Ortholog function: 3-hydroxy-3-methylglutaryl CoA synthase
Staphylococcus aureus subsp. aureus N315 SA2334 -123 4.9 ATTAAAACGCTTACAA
Staphylococcus capitis SK14 STACA0001_0950 -121 4.3 TGTAAAACGCTTACAT
Staphylococcus epidermidis ATCC 12228 SE2110 -123 4.3 TGTAAAGCGCTTACAT
Position: -112
Score: 4.7
Sequence: ATGAAAGCGATTGCAA
Locus tag: USA300HOU_2549
USA300HOU_2549 -112 4.7 ATGAAAGCGATTGCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rocA
Ortholog function: 1-pyrroline-5-carboxylate dehydrogenase
Staphylococcus aureus subsp. aureus N315 SA2341 -112 4.7 ATGAAAGCGATTGCAA
Staphylococcus capitis SK14 STACA0001_0943 -128 4.7 ATGTAAGCGATTGCAA
Staphylococcus epidermidis ATCC 12228 SE2116 -149 4.9 ATGTAAGCGTTTGCAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_0564 -49 4.8 ATGTAAGGGCTTTCTT
Staphylococcus haemolyticus JCSC1435 SH0500 -128 4.7 ATGTAAGCGATTGCAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0311 -101 4.7 ATGTAAGCGATTGCAT
Macrococcus caseolyticus JCSC5402 MCCL_0582 -44 4.7 ATGTAAGGGTTTTCTA
Position: -63
Score: 4
Sequence: ATGTAAGCGTTTGAAG
Locus tag: USA300HOU_2635
USA300HOU_2635 -63 4 ATGTAAGCGTTTGAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: arcA
Ortholog function: arginine deiminase
Staphylococcus aureus subsp. aureus N315 SA2428 -62 4 ATGtAAGCGtTTgaAg
Staphylococcus capitis SK14 STACA0001_1845 -93 5.1 ATGAAAtCGCTTTCAa
Staphylococcus epidermidis ATCC 12228 SE2217 -304 4.3 tgGtAAGCGtaTaCAT
Position: -45
Score: 4.2
Sequence: TTAAAAACGCTTACAC
Locus tag: USA300HOU_2640
USA300HOU_2640 -45 4.2 TTAAAAACGCTTACAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: manR
Ortholog function: antiterminator for mannose operon, BglG family
Staphylococcus aureus subsp. aureus N315 SA2433 -45 4.2 TTAAAAACGCTTACAC
Staphylococcus capitis SK14 STACA0001_1505 -48 4.5 TAGTAAGCGTTTTCCT
Staphylococcus epidermidis ATCC 12228 SE2227 -45 4.3 ATTAAAGCGTTTTCTC
Position: -37
Score: 4.3
Sequence: GAGAATACGCTTACAA
Locus tag: USA300HOU_2641
USA300HOU_2641 -37 4.3 GAGAATACGCTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: manP
Ortholog function: PTS system mannose-specific EIIBCA component
Staphylococcus aureus subsp. aureus N315 SA2434 -37 4.3 GAGAATACGCTTACAA
Staphylococcus capitis SK14 STACA0001_1506 -40 4.6 TTGAATACGCTTACAC
Staphylococcus epidermidis ATCC 12228 SE2228 -45 4.9 ATGTATGCGTTTACAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_2440 -39 5 ATGTTAGCGCTTACAA
6 4.3 ATTTTAGCGATTACAT
Position: -137
Score: 4.7
Sequence: ATGTAAACGCTTTCTC
Locus tag: USA300HOU_2671
USA300HOU_2671 -137 4.7 ATGTAAACGCTTTCTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: lip
Ortholog function: triacylglycerol lipase precursor
Staphylococcus aureus subsp. aureus N315 SA2463 -137 4.7 ATGTAAACGCTTTCTC
Staphylococcus capitis SK14 STACA0001_0084 -170 4.2 TTGGAAACGCTTTCTG
Staphylococcus haemolyticus JCSC1435 SH0168 -169 4.7 ATGTAAACGCTTTCTC
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2297 -145 5.1 ATGTAAGCGTTTTCTT
Position: -87
Score: 4.6
Sequence: ATGAAACCGTTATCAT
Locus tag: USA300HOU_2690
USA300HOU_2690 -87 4.6 ATGAAACCGTTATCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: drp35
Ortholog function: lactonase Drp35
Staphylococcus aureus subsp. aureus N315 SA2480 -84 4.6 ATGAAACCGTTATCAT
Staphylococcus haemolyticus JCSC1435 SH0300 -97 5 TTGAAAACGATTACAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0327 -57 4.3 ATGAAAGGCTTTGCAT
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