Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of CcpA regulog to Staphylococcus lugdunensis HKU09-01

Reference regulog properties
Source regulog: CcpA - Staphylococcaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: HPr, phosphocarrier protein; Fructose-1,6-diphosphate
Phylum: Firmicutes
Propagated regulon:
Target genome Staphylococcus lugdunensis HKU09-01
Orthologous TF(s) SLGD_01194
Regulated genes 49
Built upon 391 sites [see more]
Predicted regulatory interactions in Staphylococcus lugdunensis HKU09-01
Locus tag Position Score Sequence
Position: -223
Score: 4.7
Sequence: TTGTTAACGCTTACTT
Locus tag: SLGD_00161
SLGD_00161 -223 4.7 TTGTTAACGCTTACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glcA
Ortholog function: glucose-specific PTS enzyme IIABC
Staphylococcus aureus subsp. aureus N315 SA0183 -269 4.6 TTGAAAACGCATACTT
Staphylococcus epidermidis ATCC 12228 SE2102 -178 4.6 TTGTAAACGCTTTATT
Staphylococcus haemolyticus JCSC1435 SH0521 -171 4.6 TTGAAAACGCTTTATA
Position: -36
Score: 4.5
Sequence: TTGAAAACACTTACAA
Locus tag: SLGD_00171
SLGD_00171 -36 4.5 TTGAAAACACTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pflB
Ortholog function: Pyruvate formate lyase
Staphylococcus aureus subsp. aureus N315 SA0218 -59 4.9 ATGAAAACGTTAACAT
Staphylococcus epidermidis ATCC 12228 SE0214 -37 4.8 TTGAAAACGTTAACAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_2017 -58 4.3 GTGAAAACGGTAACAT
Macrococcus caseolyticus JCSC5402 MCCL_0434 -94 4.8 TTTTAAACGTTTACAT
Position: -92
Score: 4.7
Sequence: AAGAAAACGCTTGCAA
Locus tag: SLGD_00229
SLGD_00229 -92 4.7 AAGAAAACGCTTGCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: acoL
Ortholog function: dihydrolipoamide dehydrogenase
Staphylococcus epidermidis ATCC 12228 SE0253 -37 5.1 AAGAAAGCGCTTACAA
Staphylococcus haemolyticus JCSC1435 SH0227 -91 4.6 ATAAAAGCGCTTACAA
Staphylococcus haemolyticus JCSC1435 SH0223 -103 4.7 GAGAAAACGCTTACAT
Position: -40
Score: 4.7
Sequence: ATGTTATCGCTTACAA
Locus tag: SLGD_00238
SLGD_00238 -40 4.7 ATGTTATCGCTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: manP
Ortholog function: PTS system mannose-specific EIIBCA component
Staphylococcus aureus subsp. aureus N315 SA2434 -37 4.3 GAGAATACGCTTACAA
Staphylococcus capitis SK14 STACA0001_1506 -40 4.6 TTGAATACGCTTACAC
Staphylococcus epidermidis ATCC 12228 SE2228 -45 4.9 ATGTATGCGTTTACAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_2440 -39 5 ATGTTAGCGCTTACAA
6 4.3 ATTTTAGCGATTACAT
Position: -152
Score: 5
Sequence: TTGTAAACGCTTTCTA
Locus tag: SLGD_00268
SLGD_00268 -152 5 TTGTAAACGCTTTCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nanK
Ortholog function: predicted N-acetyl-D-mannosamine kinase, ROK family
Staphylococcus aureus subsp. aureus N315 SA0305 -109 4.9 TTGTAAACGCTATCAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_2390 -152 4.9 TTGTAAACGCTATCAT
Staphylococcus haemolyticus JCSC1435 SH0281 -150 4.9 TTGTAAACGCTATCAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0374 -157 4.6 TTGTAAACGCTACCAT
Position: -105
Score: 5
Sequence: TAGAAAGCGTTTACAA
Locus tag: SLGD_00269
SLGD_00269 -105 5 TAGAAAGCGTTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nanA
Ortholog function: N-acetylneuraminate lyase
Staphylococcus aureus subsp. aureus N315 SA0304 -64 4.9 ATGATAGCGTTTACAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_2389 -109 4.9 ATGATAGCGTTTACAA
Staphylococcus haemolyticus JCSC1435 SH0282 -108 4.9 ATGATAGCGTTTACAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0375 -182 4.6 ATGGTAGCGTTTACAA
Position: -61
Score: 4.4
Sequence: ATGAAAACGGTCACAT
Locus tag: SLGD_00289
SLGD_00289 -61 4.4 ATGAAAACGGTCACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: drp35
Ortholog function: lactonase Drp35
Staphylococcus aureus subsp. aureus N315 SA2480 -84 4.6 ATGAAACCGTTATCAT
Staphylococcus haemolyticus JCSC1435 SH0300 -97 5 TTGAAAACGATTACAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0327 -57 4.3 ATGAAAGGCTTTGCAT
Position: -67
Score: 4.8
Sequence: TTGAAATCGTTTTCTT
Locus tag: SLGD_00468
SLGD_00468 -67 4.8 TTGAAATCGTTTTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pfoR
Ortholog function: putative PTS transporter
Staphylococcus aureus subsp. aureus N315 SA2320 -76 5 TTGAAAACGTTTTCTT
Staphylococcus capitis SK14 STACA0001_0978 -221 4.2 ATAATAGCGTTTACAT
-68 4.8 TTGAAATCGCTTTCTT
Staphylococcus epidermidis ATCC 12228 SE2082 -68 4.8 TTGAAATCGCTTTCTT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1981 -79 4.3 TTGAAAACGCTTTACT
Staphylococcus haemolyticus JCSC1435 SH0537 -270 4.9 TTGAAAAGGTTTACAA
-116 4.8 TTGAAATCGTTTTCTT
Position: -92
Score: 5
Sequence: TAGAAAACGCTTTCAT
Locus tag: SLGD_00479
SLGD_00479 -92 5 TAGAAAACGCTTTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: aldA
Ortholog function: aldehyde dehydrogenase
Staphylococcus aureus subsp. aureus N315 SA0162 -103 5 ATGTAAACGCTTACTA
Staphylococcus capitis SK14 STACA0001_0986 -85 5 AAGTAAACGTTTACAT
Staphylococcus epidermidis ATCC 12228 SE2071 -68 5.1 AaGtAAaCGCTTaCAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_2103 -113 4.3 ATGTAAACGTTTTACT
Staphylococcus haemolyticus JCSC1435 SH0547 -77 5.1 AAGTAAACGCTTACAT
Position: -70
Score: 4.7
Sequence: ATGTAAGCGATTTAAT
Locus tag: SLGD_00492
SLGD_00492 -70 4.7 ATGTAAGCGATTTAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fbp
Ortholog function: fructose-bisphosphatase
Staphylococcus aureus subsp. aureus N315 SA2304 -83 4.7 ATGTTAACGTTTTCTT
Staphylococcus capitis SK14 STACA0001_0995 -66 4 ATGTAAGCGCATTACT
Staphylococcus epidermidis ATCC 12228 SE2063 -66 4.3 ATGTAAGCGCATTATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1964 -123 4.8 TTGAAATCGTTTACTT
Staphylococcus haemolyticus JCSC1435 SH0559 -64 4.3 ATGTAAGCGGTTTTAT
Position: -85
Score: 4.7
Sequence: AAGAAAGCGCTTGCAA
Locus tag: SLGD_00506
SLGD_00506 -85 4.7 AAGAAAGCGCTTGCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gntR
Ortholog function: gluconate operon transcriptional repressor
Staphylococcus aureus subsp. aureus N315 SA2295 -79 4.7 AAGAAAGCGCTTGCAA
Staphylococcus capitis SK14 STACA0001_1009 -83 4.7 AAGAAAGCGCTTGCAA
Staphylococcus epidermidis ATCC 12228 SE2046 -83 4.7 AAGAAAGCGCTTGCAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_1950 -53 4.7 ATGTAAGCGGTTGCAA
Staphylococcus haemolyticus JCSC1435 SH0574 -81 4.7 AAGAAAGCGTTTGCAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0410 -83 4.6 TTGCAAGCGCTTGCAA
Macrococcus caseolyticus JCSC5402 MCCL_0405 -325 4.6 AcGAAAGCGtTTaCAa
Position: -52
Score: 5
Sequence: AAGTAAGCGTTTACAA
Locus tag: SLGD_00513
SLGD_00513 -52 5 AAGTAAGCGTTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: acoL
Ortholog function: dihydrolipoamide dehydrogenase
Staphylococcus epidermidis ATCC 12228 SE0253 -37 5.1 AAGAAAGCGCTTACAA
Staphylococcus haemolyticus JCSC1435 SH0227 -91 4.6 ATAAAAGCGCTTACAA
Staphylococcus haemolyticus JCSC1435 SH0223 -103 4.7 GAGAAAACGCTTACAT
Position: -65
Score: 4.8
Sequence: TTGTATGCGTTTACAA
Locus tag: SLGD_00614
SLGD_00614 -65 4.8 TTGTATGCGTTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: scrA
Ortholog function: PTS system, sucrose-specific IIBC component
Staphylococcus aureus subsp. aureus N315 SA2167 -127 4.6 ATGAATGCGCTATCAA
-61 4.4 TTGGAACCGGTTACAA
Staphylococcus capitis SK14 STACA0001_1097 -63 4.4 TTGGAACCGGTTACAA
-34 4.2 ATGGAACCGGTTTCTA
Staphylococcus epidermidis ATCC 12228 SE1959 -58 4.4 TTGGAACCGGTTACAA
Staphylococcus haemolyticus JCSC1435 SH0671 -63 4.4 TTGGAACCGGTTACAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0512 -66 4.4 TTGGAACCGGTTACAA
Position: -243
Score: 4.7
Sequence: TTTAAAGCGCTTTCTT
Locus tag: SLGD_00673
SLGD_00673 -243 4.7 TTTAAAGCGCTTTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SE1944
Ortholog function: putative glycosyltransferase
Staphylococcus capitis SK14 STACA0001_1120 -267 4.7 ATTAAAGCGCTTTCTA
Staphylococcus epidermidis ATCC 12228 SE1944 -245 4.4 ATTAAAGCGCTTTCTC
Staphylococcus carnosus subsp. carnosus TM300 Sca_1866 -254 4.5 GAGAAAGCGCTTTCTA
Staphylococcus haemolyticus JCSC1435 SH0692 -248 4.7 ATTAAAACGCTTTCTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0538 -318 4.1 AGTAAAGCGTTTTCTA
Position: -72
Score: 4.7
Sequence: AAGAAAGCGCTTTAAA
Locus tag: SLGD_00674
SLGD_00674 -72 4.7 AAGAAAGCGCTTTAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: mqo
Ortholog function: malate:quinone oxidoreductase
Staphylococcus capitis SK14 STACA0001_1121 -93 4.7 TAGAAAGCGCTTTAAT
Staphylococcus epidermidis ATCC 12228 SE1943 -81 4.4 GAGAAAGCGCTTTAAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1865 -85 4.5 TAGAAAGCGCTTTCTC
Staphylococcus haemolyticus JCSC1435 SH0693 -77 4.7 AAGAAAGCGTTTTAAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0539 -90 4.1 TAGAAAACGCTTTACT
Position: -149
Score: 4.8
Sequence: ATTAAAACGTTTTCAA
Position: -112
Score: 5
Sequence: TAGTAAACGCTTTCAT
Locus tag: SLGD_00706
SLGD_00706 -149 4.8 ATTAAAACGTTTTCAA
-112 5 TAGTAAACGCTTTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glvR
Ortholog function: transcriptional regulator of maltose utilization, RpiR family
Staphylococcus aureus subsp. aureus N315 SA2115 -241 4.7 TAGTAAACGCTTACAC
Staphylococcus capitis SK14 STACA0001_1165 -115 5 TAGTAAACGCTTACAT
Staphylococcus epidermidis ATCC 12228 SE1898 -109 5 TAGTAAACGCTTACAT
Staphylococcus haemolyticus JCSC1435 SH0731 -142 4.3 ATAAAAGCGTTTTCTT
-115 4.7 TAGTAAACGCTTACAC
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0582 -113 4.8 AAGGAAACGCTTACAT
Position: -111
Score: 5
Sequence: ATGAAAGCGTTTACTA
Position: -74
Score: 4.8
Sequence: TTGAAAACGTTTTAAT
Locus tag: SLGD_00707
SLGD_00707 -111 5 ATGAAAGCGTTTACTA
-74 4.8 TTGAAAACGTTTTAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glvC
Ortholog function: maltose-specific enzyme IICB of PTS system
Staphylococcus aureus subsp. aureus N315 SA2114 -104 4.7 GTGTAAGCGTTTACTA
Staphylococcus capitis SK14 STACA0001_1166 -113 5 ATGTAAGCGTTTACTA
Staphylococcus epidermidis ATCC 12228 SE1897 -104 5 ATGTAAGCGTTTACTA
Staphylococcus haemolyticus JCSC1435 SH0732 -121 4.7 GTGTAAGCGTTTACTA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0583 -117 4.8 ATGTAAGCGTTTCCTT
Position: -116
Score: 4.7
Sequence: TTGTAACCGATTTCAA
Locus tag: SLGD_00712
SLGD_00712 -116 4.7 TTGTAACCGATTTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA2109
Ortholog function: probable amino-acid or metabolite transporter
Staphylococcus aureus subsp. aureus N315 SA2109 -122 4.2 CTGTAAACGATTGCAT
Staphylococcus capitis SK14 STACA0001_1171 -119 4.5 GTGTAATCGATTTCAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1812 -249 5 ATGAAAGCGCATACAT
Staphylococcus haemolyticus JCSC1435 SH0739 -173 4.8 ATGGAAGCGATTTCAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0591 -114 5 ATGTAAACCCTTACAT
Macrococcus caseolyticus JCSC5402 MCCL_0079 -103 4.3 GTGAAAACGTTTTCGT
Position: -127
Score: 4.7
Sequence: ATGTAAGCGTTTTCCA
Locus tag: SLGD_00717
SLGD_00717 -127 4.7 ATGTAAGCGTTTTCCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA2105
Ortholog function: hypothetical protein
Staphylococcus aureus subsp. aureus N315 SA2105 -117 4.7 ATGTAAGCGTTTTCCA
Staphylococcus capitis SK14 STACA0001_1178 -131 5 TTGTAAGCGTTTTCTA
Staphylococcus epidermidis ATCC 12228 SE1885 -130 5 TTGTAAGCGTTTTCTA
Staphylococcus carnosus subsp. carnosus TM300 Sca_1807 -119 5.1 ATGTAAGCGTTTACTT
Staphylococcus haemolyticus JCSC1435 SH0745 -127 4.7 TTGTAAGCGTTTTCCT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0598 -109 5.1 ATGTAAGCGTTTTCTT
Position: -63
Score: 4.6
Sequence: TTGAAAACGATTGCAA
Locus tag: SLGD_00844
SLGD_00844 -63 4.6 TTGAAAACGATTGCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SAS074
Ortholog function: hypothetical protein
Staphylococcus aureus subsp. aureus N315 SAS074 -64 5 TTGAAAACGATTACAA
Staphylococcus capitis SK14 STACA0001_1305 -62 5 TTGAAAACGATTTCAA
Staphylococcus epidermidis ATCC 12228 SE1763 -62 4.7 TTGAAAACGATTACAC
-15 4 AAGGAAGTGTTTTCAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_1673 -64 5 TTGAAAACGTTTTCTA
Staphylococcus haemolyticus JCSC1435 SH0868 -63 4.7 TTGAAAACGATTACAC
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0714 -64 4.6 TTGAAAACGATTGCAA
Position: -130
Score: 4.6
Sequence: TTGCAATCGTTTTCAA
Locus tag: SLGD_00845
SLGD_00845 -130 4.6 TTGCAATCGTTTTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA1975
Ortholog function: predicted membrane-bound hydrolase
Staphylococcus aureus subsp. aureus N315 SA1975 -128 5 TTGTAATCGTTTTCAA
Staphylococcus capitis SK14 STACA0001_1306 -131 5 TTGAAATCGTTTTCAA
Staphylococcus epidermidis ATCC 12228 SE1762 -130 4.7 GTGTAATCGTTTTCAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_1672 -141 5 TAGAAAACGTTTTCAA
Staphylococcus haemolyticus JCSC1435 SH0869 -129 4.7 GTGTAATCGTTTTCAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0715 -128 4.6 TTGCAATCGTTTTCAA
Position: -68
Score: 4.7
Sequence: TTTAAAGCGATTACAT
Locus tag: SLGD_00980
SLGD_00980 -68 4.7 TTTAAAGCGATTACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: scrR
Ortholog function: sucrose operon repressor
Staphylococcus aureus subsp. aureus N315 SA1847 -65 4.3 TTTAAAGCGGTTACAC
Staphylococcus capitis SK14 STACA0001_2124 -67 4.7 TTTAAAGCGATTACAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0836 -68 4.4 TTTAAAGCGATTCCAT
Position: -80
Score: 4.7
Sequence: TTGAAAACGCTTTCTC
Locus tag: SLGD_01166
SLGD_01166 -80 4.7 TTGAAAACGCTTTCTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: putA
Ortholog function: proline dehydrogenase
Staphylococcus aureus subsp. aureus N315 SA1585 -71 4.7 ATGAAAACGCTTTCTC
Staphylococcus capitis SK14 STACA0001_0658 -81 4.7 ATGTAAACGCTTTCTC
Staphylococcus epidermidis ATCC 12228 SE1437 -80 5.1 ATGTAAACGCTTTCTT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1371 -71 4.9 TTGTTAACGTTTTCAT
Staphylococcus haemolyticus JCSC1435 SH1157 -81 5 TTGAAAACGCTTTCTA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0999 -80 5 TTGTAAACGATTTCAT
Macrococcus caseolyticus JCSC5402 MCCL_1451 -52 4.9 TTTAAAGCGTTTTCAT
Position: -139
Score: 4.9
Sequence: ATGAAATCGCTTTCTT
Locus tag: SLGD_01198
SLGD_01198 -139 4.9 ATGAAATCGCTTTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: acuA
Ortholog function: acetoin utilization protein AcuA
Staphylococcus aureus subsp. aureus N315 SA1555 -147 4.7 GTGAAAACGCTTTCTT
Staphylococcus capitis SK14 STACA0001_0627 -154 4.9 ATGAAATCGCTTTCTT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1339 -213 5 TTGAAATCGTTTTCAT
Staphylococcus haemolyticus JCSC1435 SH1188 -144 4.9 ATGAAATCGCTTTCTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1029 -162 4.5 ATGAAATCGCTTGCTT
Position: -32
Score: 4.9
Sequence: AAGAAAGCGATTTCAT
Locus tag: SLGD_01199
SLGD_01199 -32 4.9 AAGAAAGCGATTTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: acsA
Ortholog function: acetyl-CoA synthetase
Staphylococcus aureus subsp. aureus N315 SA1554 -37 4.7 AAGAAAGCGTTTTCAC
Staphylococcus capitis SK14 STACA0001_0626 -35 4.9 AAGAAAGCGATTTCAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1338 -34 5 ATGAAAACGATTTCAA
Staphylococcus haemolyticus JCSC1435 SH1189 -36 4.9 AAGAAAGCGATTTCAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1030 -33 4.5 AAGCAAGCGATTTCAT
Macrococcus caseolyticus JCSC5402 MCCL_1409 0 4.7 ATGAAAACGATTACAC
Position: -129
Score: 4.9
Sequence: TTGTAAACGCTATCAA
Locus tag: SLGD_01200
SLGD_01200 -129 4.9 TTGTAAACGCTATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fhs
Ortholog function: formyltetrahydrofolate synthetase
Staphylococcus aureus subsp. aureus N315 SA1553 -130 4.1 ATGAAAGCGCTAACCC
Staphylococcus haemolyticus JCSC1435 SH1190 -138 4.3 TTGGAAACGCTCTCAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1032 -147 4.4 TTGAAAGCGCTATCTC
Position: -150
Score: 4.1
Sequence: TTGTTAACATTTTCAA
Locus tag: SLGD_01205
SLGD_01205 -150 4.1 TTGTTAACATTTTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ptaA
Ortholog function: PTS system N-acetylglucosamine-specific IIBC component
Staphylococcus capitis SK14 STACA0001_0618 -168 4.6 AATAAAACGTTTACAT
-48 4.3 ATGAAAAGCATTTCAA
Staphylococcus epidermidis ATCC 12228 SE1403 -131 4.6 AATTAAGCGTTTACAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1332 -44 4.6 AATAAAACGTTTTCAT
Staphylococcus haemolyticus JCSC1435 SH1198 -101 3.9 TCAAAAGCGCTTACAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1037 -86 4.1 AGTAAATCGTTTACAT
Position: -52
Score: 4.6
Sequence: TTGATTGCGCTTTCAT
Locus tag: SLGD_01221
SLGD_01221 -52 4.6 TTGATTGCGCTTTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ald
Ortholog function: alanine dehydrogenase
Staphylococcus aureus subsp. aureus N315 SA1531 -52 4.5 TTGATTGCGCTTTCAA
Staphylococcus capitis SK14 STACA0001_0602 -52 4.6 ATGATTGCGCTTTCAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_1314 -54 4.6 ATGATTGCGCTTTCAT
Staphylococcus haemolyticus JCSC1435 SH1216 -52 4.1 CTGATTGCGCTTTCAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1057 -52 4.6 TTGATTGCGCTTTCAT
Position: -106
Score: 4.9
Sequence: ATTAAAACGTTTACAT
Locus tag: SLGD_01231
SLGD_01231 -106 4.9 ATTAAAACGTTTACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pfkA
Ortholog function: 6-phosphofructokinase
Staphylococcus aureus subsp. aureus N315 SA1521 -151 4.8 TTTAAAACGTTTACAT
Staphylococcus capitis SK14 STACA0001_0592 -107 4.8 TTTAAAACGTTTACAT
Staphylococcus epidermidis ATCC 12228 SE1374 -152 4.8 TTTAAAACGTTTACAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1304 -103 4.6 TATAAAACGTTTACAT
Staphylococcus haemolyticus JCSC1435 SH1226 -152 4.6 TATAAAACGTTTACAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1068 -148 4.8 TTTAAAACGTTTACAT
Macrococcus caseolyticus JCSC5402 MCCL_1365 -100 4.8 TTTAAAACGTTTTCAT
Position: -50
Score: 5
Sequence: TTGAAAGCGCTTACTA
Locus tag: SLGD_01405
SLGD_01405 -50 5 TTGAAAGCGCTTACTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: malR
Ortholog function: maltose operon transcriptional repressor
Staphylococcus aureus subsp. aureus N315 SA1339 -43 4.4 TTGGAAGCGTTTTCCA
Staphylococcus haemolyticus JCSC1435 SH1407 -159 5 TTGAAAGCGTTTACTA
Macrococcus caseolyticus JCSC5402 MCCL_0356 -43 5 ATGAAAACGTTTTCTT
Position: -152
Score: 3.9
Sequence: ATGATAACTTTTACTT
Locus tag: SLGD_01549
SLGD_01549 -152 3.9 ATGATAACTTTTACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: citB
Ortholog function: aconitate hydratase
Staphylococcus aureus subsp. aureus N315 SA1184 -103 4.4 AATTAAGCGTTTTCTA
Staphylococcus capitis SK14 STACA0001_1597 -103 4.4 AATAAAGCGTTTTCTA
Staphylococcus epidermidis ATCC 12228 SE1032 -103 4.4 AATAAAGCGTTTTCTA
Staphylococcus carnosus subsp. carnosus TM300 Sca_0991 -68 4.5 TTGTAATCCCTTACTT
Macrococcus caseolyticus JCSC5402 MCCL_1008 -36 4 ATGTAAAGGCTTTATC
Position: -28
Score: 4.7
Sequence: ATGAAAGCGTTTCCTA
Locus tag: SLGD_01572
SLGD_01572 -28 4.7 ATGAAAGCGTTTCCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA1162
Ortholog function: hypothetical protein
Staphylococcus aureus subsp. aureus N315 SA1162 -27 4.4 GTGAAAGCGCTTGCTT
Staphylococcus capitis SK14 STACA0001_1569 -30 4.8 ATGAAAGCGCTTGCTT
Staphylococcus epidermidis ATCC 12228 SE1007 -29 4.4 GTGAAAGCGCTTGCTA
Staphylococcus carnosus subsp. carnosus TM300 Sca_0968 -30 4.7 TTGTAAGCGCTTACTC
Staphylococcus haemolyticus JCSC1435 SH1581 -29 4.8 ATGAAAGCGTTTCCTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1440 -33 4.7 TTGGAAACGCTTACTT
Position: -120
Score: 4.8
Sequence: TTGACAACGCTTACAT
Locus tag: SLGD_01593
SLGD_01593 -120 4.8 TTGACAACGCTTACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpF
Ortholog function: glycerol uptake facilitator
Staphylococcus aureus subsp. aureus N315 SA1140 -133 4.8 TTGACAACGCTTTCAT
Staphylococcus capitis SK14 STACA0001_1544 -132 4.7 TTGACAACGCTTACAA
Staphylococcus epidermidis ATCC 12228 SE0977 -130 4.7 TTGACAACGCTTACAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_0948 -126 4.8 TTGACAACGCTTTCAT
Staphylococcus haemolyticus JCSC1435 SH1614 -128 4.7 TTGACAACGCTTACAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1461 -145 4.7 TTGACAACGCTTACAA
Macrococcus caseolyticus JCSC5402 MCCL_0891 -133 4.7 TTGACAACGTTTACAT
Position: -244
Score: 4.5
Sequence: GTGGAAGCGCTTTCTA
Locus tag: SLGD_01735
SLGD_01735 -244 4.5 GTGGAAGCGCTTTCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: sdhC
Ortholog function: succinate dehydrogenase cytochrome b subunit
Staphylococcus aureus subsp. aureus N315 SA0994 -235 4.4 GTGGAAGCGTTTTCTA
Staphylococcus capitis SK14 STACA0001_2159 -286 4.4 GTGGAAGCGTTTTCTA
Staphylococcus epidermidis ATCC 12228 SE0840 -270 4.7 ATGGAAGCGTTTTCTA
Staphylococcus carnosus subsp. carnosus TM300 Sca_0765 -291 5 TTGTAAACGCTTTCTA
Staphylococcus haemolyticus JCSC1435 SH1814 -285 4.7 ATGGAAGCGTTTTCTA
-61 4 TTGAAAAGACTTTCTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1648 -232 4.7 ATGGAAGCGTTTTCTA
Macrococcus caseolyticus JCSC5402 MCCL_1319 -85 4.5 ATGTAATCGGTTTCTT
Position: -62
Score: 4.4
Sequence: AAGTAACGGTTTTCAT
Locus tag: SLGD_01853
SLGD_01853 -62 4.4 AAGTAACGGTTTTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA0873
Ortholog function: DJ-1/PfpI family protein
Staphylococcus aureus subsp. aureus N315 SA0873 -62 4.6 ATGTAACGGTTTTCAA
Staphylococcus capitis SK14 STACA0001_0121 -62 4.4 AAGTAACGGTTTTCAA
Staphylococcus epidermidis ATCC 12228 SE0715 -62 4.4 AAGTAACGGTTTTCAA
Staphylococcus carnosus subsp. carnosus TM300 Sca_0617 -64 4.4 TTGGTAACGATTTCAT
Staphylococcus haemolyticus JCSC1435 SH1944 -93 4.9 TTGTAAACCTTTTCAA
Position: -296
Score: 5
Sequence: ATGTAAGGGCTTACAA
Position: -84
Score: 4.3
Sequence: ATGAAACCCCTTTAAA
Position: -41
Score: 4.3
Sequence: ATGAAAGCGAAATCAT
Locus tag: SLGD_01902
SLGD_01902 -296 5 ATGTAAGGGCTTACAA
-84 4.3 ATGAAACCCCTTTAAA
-41 4.3 ATGAAAGCGAAATCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gudB
Ortholog function: NAD-specific glutamate dehydrogenase
Staphylococcus aureus subsp. aureus N315 SA0819 -84 4.5 TTGTAAGGGCTTTAAA
-42 4.3 TTGAAAGCGAAATCAT
Staphylococcus capitis SK14 STACA0001_0168 -84 4.5 TTGTAAACCCTTTAAA
-41 4.3 TTGAAAGCGAAATCAT
Staphylococcus epidermidis ATCC 12228 SE0654 -74 4.1 TTTAAAATGCTTTCAA
-41 4.3 ATGAAAGCGAAATCAT
Staphylococcus haemolyticus JCSC1435 SH1992 -77 4.5 TTGAAAACCCTTTAAA
-35 4.3 ATGAAAGCGAAATCAT
Macrococcus caseolyticus JCSC5402 MCCL_0584 -93 4.6 TTGGTAGCGTTTTCAA
Position: -102
Score: 4.6
Sequence: ATGTAAGCGTTTTTAT
Locus tag: SLGD_02333
SLGD_02333 -102 4.6 ATGTAAGCGTTTTTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA0511
Ortholog function: uncharacterized epimerase/dehydratase
Staphylococcus aureus subsp. aureus N315 SA0511 -97 4.4 AAGAAAGCGCTTTTAT
Staphylococcus capitis SK14 STACA0001_0477 -98 4.4 AAGAAAGCGCTTTTAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0213 -144 4.4 ATGTAAGCGCTTTACT
Staphylococcus haemolyticus JCSC1435 SH2450 -101 4.4 AAGAAAGCGCTTTTAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2164 -164 4.3 TTGAAATCGCAATCAA
-98 3.9 AATAAAGCGTTTTTAT
Macrococcus caseolyticus JCSC5402 MCCL_1856 -94 4.3 ATGTAAGCGTTTCTAA
Position: -73
Score: 4.6
Sequence: ATGATAAGGCTTTCAT
Locus tag: SLGD_02339
SLGD_02339 -73 4.6 ATGATAAGGCTTTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: kbl
Ortholog function: 2-amino-3-ketobutyrate coenzyme A ligase
Staphylococcus aureus subsp. aureus N315 SA0508 -79 4.6 ATGATAAGGCTTTCAA
Staphylococcus capitis SK14 STACA0001_0483 -73 4.6 ATGATAAGGCTTTCAT
Staphylococcus haemolyticus JCSC1435 SH2457 -74 4.3 ATGATAGTGCTTTCAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2205 -100 4.8 TAGAAAACGCTTTCTA
Position: 22
Score: 4.5
Sequence: TTGGAATCGTTTTCTT
Locus tag: SLGD_02368
SLGD_02368 22 4.5 TTGGAATCGTTTTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nupC
Ortholog function: pyrimidine nucleoside transporter
Staphylococcus aureus subsp. aureus N315 SA0479 -63 4.4 ATGTTAGCCCTTCCAT
Staphylococcus capitis SK14 STACA0001_0514 -61 4.3 ATGTTAGCGCGTTCAT
Staphylococcus epidermidis ATCC 12228 SE0283 -63 4.2 ATGTTAGCGTGTTCAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2235 -65 4.2 ATGTAAGTGCTATCAA
Macrococcus caseolyticus JCSC5402 MCCL_1890 -70 4 TGTTTAGCGCTTTCAT
Position: -68
Score: 5
Sequence: ATGAAAGCCTTTACAT
Locus tag: SLGD_02441
SLGD_02441 -68 5 ATGAAAGCCTTTACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: treP
Ortholog function: phosphotransferase system trehalose-specific enzyme IIBC component homolog
Staphylococcus aureus subsp. aureus N315 SA0432 -68 4.9 TTGAAAGCCTTTACAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0108 -71 4.9 TTGAAAGCCTTTACAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0109 -71 4.9 TTGAAAGCCTTTACAT
Staphylococcus haemolyticus JCSC1435 SH2538 -69 4.9 ATGAAAGCCTTTACAA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2282 -81 4.9 ATGAAAACCTTTACAA
Macrococcus caseolyticus JCSC5402 MCCL_1938 -49 4.4 TTGAAAACCCTTTCAG
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