Propagation of CcpA regulog to Staphylococcus lugdunensis HKU09-01
| Source regulog: | CcpA - Staphylococcaceae |
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | repressor (activator) |
| Biological process: | Carbon catabolism |
| Effector: | HPr, phosphocarrier protein; Fructose-1,6-diphosphate |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Staphylococcus lugdunensis HKU09-01 |
| Orthologous TF(s) | SLGD_01194 |
| Regulated genes | 49 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -223
Score: 4.7 Sequence: TTGTTAACGCTTACTT
Locus tag: SLGD_00161
|
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| SLGD_00161 | -223 | 4.7 | TTGTTAACGCTTACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glcA | ||||
| Ortholog function: glucose-specific PTS enzyme IIABC | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0183 | -269 | 4.6 | TTGAAAACGCATACTT |
| Staphylococcus epidermidis ATCC 12228 | SE2102 | -178 | 4.6 | TTGTAAACGCTTTATT |
| Staphylococcus haemolyticus JCSC1435 | SH0521 | -171 | 4.6 | TTGAAAACGCTTTATA |
|
Position: -36
Score: 4.5 Sequence: TTGAAAACACTTACAA
Locus tag: SLGD_00171
|
||||
| SLGD_00171 | -36 | 4.5 | TTGAAAACACTTACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pflB | ||||
| Ortholog function: Pyruvate formate lyase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0218 | -59 | 4.9 | ATGAAAACGTTAACAT |
| Staphylococcus epidermidis ATCC 12228 | SE0214 | -37 | 4.8 | TTGAAAACGTTAACAA |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_2017 | -58 | 4.3 | GTGAAAACGGTAACAT |
| Macrococcus caseolyticus JCSC5402 | MCCL_0434 | -94 | 4.8 | TTTTAAACGTTTACAT |
|
Position: -92
Score: 4.7 Sequence: AAGAAAACGCTTGCAA
Locus tag: SLGD_00229
|
||||
| SLGD_00229 | -92 | 4.7 | AAGAAAACGCTTGCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: acoL | ||||
| Ortholog function: dihydrolipoamide dehydrogenase | ||||
| Staphylococcus epidermidis ATCC 12228 | SE0253 | -37 | 5.1 | AAGAAAGCGCTTACAA |
| Staphylococcus haemolyticus JCSC1435 | SH0227 | -91 | 4.6 | ATAAAAGCGCTTACAA |
| Staphylococcus haemolyticus JCSC1435 | SH0223 | -103 | 4.7 | GAGAAAACGCTTACAT |
|
Position: -40
Score: 4.7 Sequence: ATGTTATCGCTTACAA
Locus tag: SLGD_00238
|
||||
| SLGD_00238 | -40 | 4.7 | ATGTTATCGCTTACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: manP | ||||
| Ortholog function: PTS system mannose-specific EIIBCA component | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2434 | -37 | 4.3 | GAGAATACGCTTACAA |
| Staphylococcus capitis SK14 | STACA0001_1506 | -40 | 4.6 | TTGAATACGCTTACAC |
| Staphylococcus epidermidis ATCC 12228 | SE2228 | -45 | 4.9 | ATGTATGCGTTTACAA |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_2440 | -39 | 5 | ATGTTAGCGCTTACAA |
| 6 | 4.3 | ATTTTAGCGATTACAT | ||
|
Position: -152
Score: 5 Sequence: TTGTAAACGCTTTCTA
Locus tag: SLGD_00268
|
||||
| SLGD_00268 | -152 | 5 | TTGTAAACGCTTTCTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nanK | ||||
| Ortholog function: predicted N-acetyl-D-mannosamine kinase, ROK family | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0305 | -109 | 4.9 | TTGTAAACGCTATCAT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_2390 | -152 | 4.9 | TTGTAAACGCTATCAT |
| Staphylococcus haemolyticus JCSC1435 | SH0281 | -150 | 4.9 | TTGTAAACGCTATCAT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0374 | -157 | 4.6 | TTGTAAACGCTACCAT |
|
Position: -105
Score: 5 Sequence: TAGAAAGCGTTTACAA
Locus tag: SLGD_00269
|
||||
| SLGD_00269 | -105 | 5 | TAGAAAGCGTTTACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nanA | ||||
| Ortholog function: N-acetylneuraminate lyase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0304 | -64 | 4.9 | ATGATAGCGTTTACAA |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_2389 | -109 | 4.9 | ATGATAGCGTTTACAA |
| Staphylococcus haemolyticus JCSC1435 | SH0282 | -108 | 4.9 | ATGATAGCGTTTACAA |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0375 | -182 | 4.6 | ATGGTAGCGTTTACAA |
|
Position: -61
Score: 4.4 Sequence: ATGAAAACGGTCACAT
Locus tag: SLGD_00289
|
||||
| SLGD_00289 | -61 | 4.4 | ATGAAAACGGTCACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: drp35 | ||||
| Ortholog function: lactonase Drp35 | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2480 | -84 | 4.6 | ATGAAACCGTTATCAT |
| Staphylococcus haemolyticus JCSC1435 | SH0300 | -97 | 5 | TTGAAAACGATTACAT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0327 | -57 | 4.3 | ATGAAAGGCTTTGCAT |
|
Position: -67
Score: 4.8 Sequence: TTGAAATCGTTTTCTT
Locus tag: SLGD_00468
|
||||
| SLGD_00468 | -67 | 4.8 | TTGAAATCGTTTTCTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pfoR | ||||
| Ortholog function: putative PTS transporter | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2320 | -76 | 5 | TTGAAAACGTTTTCTT |
| Staphylococcus capitis SK14 | STACA0001_0978 | -221 | 4.2 | ATAATAGCGTTTACAT |
| -68 | 4.8 | TTGAAATCGCTTTCTT | ||
| Staphylococcus epidermidis ATCC 12228 | SE2082 | -68 | 4.8 | TTGAAATCGCTTTCTT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1981 | -79 | 4.3 | TTGAAAACGCTTTACT |
| Staphylococcus haemolyticus JCSC1435 | SH0537 | -270 | 4.9 | TTGAAAAGGTTTACAA |
| -116 | 4.8 | TTGAAATCGTTTTCTT | ||
|
Position: -92
Score: 5 Sequence: TAGAAAACGCTTTCAT
Locus tag: SLGD_00479
|
||||
| SLGD_00479 | -92 | 5 | TAGAAAACGCTTTCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aldA | ||||
| Ortholog function: aldehyde dehydrogenase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0162 | -103 | 5 | ATGTAAACGCTTACTA |
| Staphylococcus capitis SK14 | STACA0001_0986 | -85 | 5 | AAGTAAACGTTTACAT |
| Staphylococcus epidermidis ATCC 12228 | SE2071 | -68 | 5.1 | AaGtAAaCGCTTaCAT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_2103 | -113 | 4.3 | ATGTAAACGTTTTACT |
| Staphylococcus haemolyticus JCSC1435 | SH0547 | -77 | 5.1 | AAGTAAACGCTTACAT |
|
Position: -70
Score: 4.7 Sequence: ATGTAAGCGATTTAAT
Locus tag: SLGD_00492
|
||||
| SLGD_00492 | -70 | 4.7 | ATGTAAGCGATTTAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fbp | ||||
| Ortholog function: fructose-bisphosphatase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2304 | -83 | 4.7 | ATGTTAACGTTTTCTT |
| Staphylococcus capitis SK14 | STACA0001_0995 | -66 | 4 | ATGTAAGCGCATTACT |
| Staphylococcus epidermidis ATCC 12228 | SE2063 | -66 | 4.3 | ATGTAAGCGCATTATT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1964 | -123 | 4.8 | TTGAAATCGTTTACTT |
| Staphylococcus haemolyticus JCSC1435 | SH0559 | -64 | 4.3 | ATGTAAGCGGTTTTAT |
|
Position: -85
Score: 4.7 Sequence: AAGAAAGCGCTTGCAA
Locus tag: SLGD_00506
|
||||
| SLGD_00506 | -85 | 4.7 | AAGAAAGCGCTTGCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gntR | ||||
| Ortholog function: gluconate operon transcriptional repressor | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2295 | -79 | 4.7 | AAGAAAGCGCTTGCAA |
| Staphylococcus capitis SK14 | STACA0001_1009 | -83 | 4.7 | AAGAAAGCGCTTGCAA |
| Staphylococcus epidermidis ATCC 12228 | SE2046 | -83 | 4.7 | AAGAAAGCGCTTGCAA |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1950 | -53 | 4.7 | ATGTAAGCGGTTGCAA |
| Staphylococcus haemolyticus JCSC1435 | SH0574 | -81 | 4.7 | AAGAAAGCGTTTGCAA |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0410 | -83 | 4.6 | TTGCAAGCGCTTGCAA |
| Macrococcus caseolyticus JCSC5402 | MCCL_0405 | -325 | 4.6 | AcGAAAGCGtTTaCAa |
|
Position: -52
Score: 5 Sequence: AAGTAAGCGTTTACAA
Locus tag: SLGD_00513
|
||||
| SLGD_00513 | -52 | 5 | AAGTAAGCGTTTACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: acoL | ||||
| Ortholog function: dihydrolipoamide dehydrogenase | ||||
| Staphylococcus epidermidis ATCC 12228 | SE0253 | -37 | 5.1 | AAGAAAGCGCTTACAA |
| Staphylococcus haemolyticus JCSC1435 | SH0227 | -91 | 4.6 | ATAAAAGCGCTTACAA |
| Staphylococcus haemolyticus JCSC1435 | SH0223 | -103 | 4.7 | GAGAAAACGCTTACAT |
|
Position: -65
Score: 4.8 Sequence: TTGTATGCGTTTACAA
Locus tag: SLGD_00614
|
||||
| SLGD_00614 | -65 | 4.8 | TTGTATGCGTTTACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: scrA | ||||
| Ortholog function: PTS system, sucrose-specific IIBC component | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2167 | -127 | 4.6 | ATGAATGCGCTATCAA |
| -61 | 4.4 | TTGGAACCGGTTACAA | ||
| Staphylococcus capitis SK14 | STACA0001_1097 | -63 | 4.4 | TTGGAACCGGTTACAA |
| -34 | 4.2 | ATGGAACCGGTTTCTA | ||
| Staphylococcus epidermidis ATCC 12228 | SE1959 | -58 | 4.4 | TTGGAACCGGTTACAA |
| Staphylococcus haemolyticus JCSC1435 | SH0671 | -63 | 4.4 | TTGGAACCGGTTACAA |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0512 | -66 | 4.4 | TTGGAACCGGTTACAA |
|
Position: -243
Score: 4.7 Sequence: TTTAAAGCGCTTTCTT
Locus tag: SLGD_00673
|
||||
| SLGD_00673 | -243 | 4.7 | TTTAAAGCGCTTTCTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SE1944 | ||||
| Ortholog function: putative glycosyltransferase | ||||
| Staphylococcus capitis SK14 | STACA0001_1120 | -267 | 4.7 | ATTAAAGCGCTTTCTA |
| Staphylococcus epidermidis ATCC 12228 | SE1944 | -245 | 4.4 | ATTAAAGCGCTTTCTC |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1866 | -254 | 4.5 | GAGAAAGCGCTTTCTA |
| Staphylococcus haemolyticus JCSC1435 | SH0692 | -248 | 4.7 | ATTAAAACGCTTTCTT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0538 | -318 | 4.1 | AGTAAAGCGTTTTCTA |
|
Position: -72
Score: 4.7 Sequence: AAGAAAGCGCTTTAAA
Locus tag: SLGD_00674
|
||||
| SLGD_00674 | -72 | 4.7 | AAGAAAGCGCTTTAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mqo | ||||
| Ortholog function: malate:quinone oxidoreductase | ||||
| Staphylococcus capitis SK14 | STACA0001_1121 | -93 | 4.7 | TAGAAAGCGCTTTAAT |
| Staphylococcus epidermidis ATCC 12228 | SE1943 | -81 | 4.4 | GAGAAAGCGCTTTAAT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1865 | -85 | 4.5 | TAGAAAGCGCTTTCTC |
| Staphylococcus haemolyticus JCSC1435 | SH0693 | -77 | 4.7 | AAGAAAGCGTTTTAAT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0539 | -90 | 4.1 | TAGAAAACGCTTTACT |
|
Position: -149
Score: 4.8 Sequence: ATTAAAACGTTTTCAA
Position: -112
Score: 5 Sequence: TAGTAAACGCTTTCAT
Locus tag: SLGD_00706
|
||||
| SLGD_00706 | -149 | 4.8 | ATTAAAACGTTTTCAA | |
| -112 | 5 | TAGTAAACGCTTTCAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glvR | ||||
| Ortholog function: transcriptional regulator of maltose utilization, RpiR family | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2115 | -241 | 4.7 | TAGTAAACGCTTACAC |
| Staphylococcus capitis SK14 | STACA0001_1165 | -115 | 5 | TAGTAAACGCTTACAT |
| Staphylococcus epidermidis ATCC 12228 | SE1898 | -109 | 5 | TAGTAAACGCTTACAT |
| Staphylococcus haemolyticus JCSC1435 | SH0731 | -142 | 4.3 | ATAAAAGCGTTTTCTT |
| -115 | 4.7 | TAGTAAACGCTTACAC | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0582 | -113 | 4.8 | AAGGAAACGCTTACAT |
|
Position: -111
Score: 5 Sequence: ATGAAAGCGTTTACTA
Position: -74
Score: 4.8 Sequence: TTGAAAACGTTTTAAT
Locus tag: SLGD_00707
|
||||
| SLGD_00707 | -111 | 5 | ATGAAAGCGTTTACTA | |
| -74 | 4.8 | TTGAAAACGTTTTAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glvC | ||||
| Ortholog function: maltose-specific enzyme IICB of PTS system | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2114 | -104 | 4.7 | GTGTAAGCGTTTACTA |
| Staphylococcus capitis SK14 | STACA0001_1166 | -113 | 5 | ATGTAAGCGTTTACTA |
| Staphylococcus epidermidis ATCC 12228 | SE1897 | -104 | 5 | ATGTAAGCGTTTACTA |
| Staphylococcus haemolyticus JCSC1435 | SH0732 | -121 | 4.7 | GTGTAAGCGTTTACTA |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0583 | -117 | 4.8 | ATGTAAGCGTTTCCTT |
|
Position: -116
Score: 4.7 Sequence: TTGTAACCGATTTCAA
Locus tag: SLGD_00712
|
||||
| SLGD_00712 | -116 | 4.7 | TTGTAACCGATTTCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA2109 | ||||
| Ortholog function: probable amino-acid or metabolite transporter | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2109 | -122 | 4.2 | CTGTAAACGATTGCAT |
| Staphylococcus capitis SK14 | STACA0001_1171 | -119 | 4.5 | GTGTAATCGATTTCAT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1812 | -249 | 5 | ATGAAAGCGCATACAT |
| Staphylococcus haemolyticus JCSC1435 | SH0739 | -173 | 4.8 | ATGGAAGCGATTTCAA |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0591 | -114 | 5 | ATGTAAACCCTTACAT |
| Macrococcus caseolyticus JCSC5402 | MCCL_0079 | -103 | 4.3 | GTGAAAACGTTTTCGT |
|
Position: -127
Score: 4.7 Sequence: ATGTAAGCGTTTTCCA
Locus tag: SLGD_00717
|
||||
| SLGD_00717 | -127 | 4.7 | ATGTAAGCGTTTTCCA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA2105 | ||||
| Ortholog function: hypothetical protein | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2105 | -117 | 4.7 | ATGTAAGCGTTTTCCA |
| Staphylococcus capitis SK14 | STACA0001_1178 | -131 | 5 | TTGTAAGCGTTTTCTA |
| Staphylococcus epidermidis ATCC 12228 | SE1885 | -130 | 5 | TTGTAAGCGTTTTCTA |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1807 | -119 | 5.1 | ATGTAAGCGTTTACTT |
| Staphylococcus haemolyticus JCSC1435 | SH0745 | -127 | 4.7 | TTGTAAGCGTTTTCCT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0598 | -109 | 5.1 | ATGTAAGCGTTTTCTT |
|
Position: -63
Score: 4.6 Sequence: TTGAAAACGATTGCAA
Locus tag: SLGD_00844
|
||||
| SLGD_00844 | -63 | 4.6 | TTGAAAACGATTGCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SAS074 | ||||
| Ortholog function: hypothetical protein | ||||
| Staphylococcus aureus subsp. aureus N315 | SAS074 | -64 | 5 | TTGAAAACGATTACAA |
| Staphylococcus capitis SK14 | STACA0001_1305 | -62 | 5 | TTGAAAACGATTTCAA |
| Staphylococcus epidermidis ATCC 12228 | SE1763 | -62 | 4.7 | TTGAAAACGATTACAC |
| -15 | 4 | AAGGAAGTGTTTTCAA | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1673 | -64 | 5 | TTGAAAACGTTTTCTA |
| Staphylococcus haemolyticus JCSC1435 | SH0868 | -63 | 4.7 | TTGAAAACGATTACAC |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0714 | -64 | 4.6 | TTGAAAACGATTGCAA |
|
Position: -130
Score: 4.6 Sequence: TTGCAATCGTTTTCAA
Locus tag: SLGD_00845
|
||||
| SLGD_00845 | -130 | 4.6 | TTGCAATCGTTTTCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA1975 | ||||
| Ortholog function: predicted membrane-bound hydrolase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1975 | -128 | 5 | TTGTAATCGTTTTCAA |
| Staphylococcus capitis SK14 | STACA0001_1306 | -131 | 5 | TTGAAATCGTTTTCAA |
| Staphylococcus epidermidis ATCC 12228 | SE1762 | -130 | 4.7 | GTGTAATCGTTTTCAA |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1672 | -141 | 5 | TAGAAAACGTTTTCAA |
| Staphylococcus haemolyticus JCSC1435 | SH0869 | -129 | 4.7 | GTGTAATCGTTTTCAA |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0715 | -128 | 4.6 | TTGCAATCGTTTTCAA |
|
Position: -68
Score: 4.7 Sequence: TTTAAAGCGATTACAT
Locus tag: SLGD_00980
|
||||
| SLGD_00980 | -68 | 4.7 | TTTAAAGCGATTACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: scrR | ||||
| Ortholog function: sucrose operon repressor | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1847 | -65 | 4.3 | TTTAAAGCGGTTACAC |
| Staphylococcus capitis SK14 | STACA0001_2124 | -67 | 4.7 | TTTAAAGCGATTACAT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0836 | -68 | 4.4 | TTTAAAGCGATTCCAT |
|
Position: -80
Score: 4.7 Sequence: TTGAAAACGCTTTCTC
Locus tag: SLGD_01166
|
||||
| SLGD_01166 | -80 | 4.7 | TTGAAAACGCTTTCTC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: putA | ||||
| Ortholog function: proline dehydrogenase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1585 | -71 | 4.7 | ATGAAAACGCTTTCTC |
| Staphylococcus capitis SK14 | STACA0001_0658 | -81 | 4.7 | ATGTAAACGCTTTCTC |
| Staphylococcus epidermidis ATCC 12228 | SE1437 | -80 | 5.1 | ATGTAAACGCTTTCTT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1371 | -71 | 4.9 | TTGTTAACGTTTTCAT |
| Staphylococcus haemolyticus JCSC1435 | SH1157 | -81 | 5 | TTGAAAACGCTTTCTA |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0999 | -80 | 5 | TTGTAAACGATTTCAT |
| Macrococcus caseolyticus JCSC5402 | MCCL_1451 | -52 | 4.9 | TTTAAAGCGTTTTCAT |
|
Position: -139
Score: 4.9 Sequence: ATGAAATCGCTTTCTT
Locus tag: SLGD_01198
|
||||
| SLGD_01198 | -139 | 4.9 | ATGAAATCGCTTTCTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: acuA | ||||
| Ortholog function: acetoin utilization protein AcuA | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1555 | -147 | 4.7 | GTGAAAACGCTTTCTT |
| Staphylococcus capitis SK14 | STACA0001_0627 | -154 | 4.9 | ATGAAATCGCTTTCTT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1339 | -213 | 5 | TTGAAATCGTTTTCAT |
| Staphylococcus haemolyticus JCSC1435 | SH1188 | -144 | 4.9 | ATGAAATCGCTTTCTT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1029 | -162 | 4.5 | ATGAAATCGCTTGCTT |
|
Position: -32
Score: 4.9 Sequence: AAGAAAGCGATTTCAT
Locus tag: SLGD_01199
|
||||
| SLGD_01199 | -32 | 4.9 | AAGAAAGCGATTTCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: acsA | ||||
| Ortholog function: acetyl-CoA synthetase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1554 | -37 | 4.7 | AAGAAAGCGTTTTCAC |
| Staphylococcus capitis SK14 | STACA0001_0626 | -35 | 4.9 | AAGAAAGCGATTTCAT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1338 | -34 | 5 | ATGAAAACGATTTCAA |
| Staphylococcus haemolyticus JCSC1435 | SH1189 | -36 | 4.9 | AAGAAAGCGATTTCAT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1030 | -33 | 4.5 | AAGCAAGCGATTTCAT |
| Macrococcus caseolyticus JCSC5402 | MCCL_1409 | 0 | 4.7 | ATGAAAACGATTACAC |
|
Position: -129
Score: 4.9 Sequence: TTGTAAACGCTATCAA
Locus tag: SLGD_01200
|
||||
| SLGD_01200 | -129 | 4.9 | TTGTAAACGCTATCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fhs | ||||
| Ortholog function: formyltetrahydrofolate synthetase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1553 | -130 | 4.1 | ATGAAAGCGCTAACCC |
| Staphylococcus haemolyticus JCSC1435 | SH1190 | -138 | 4.3 | TTGGAAACGCTCTCAA |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1032 | -147 | 4.4 | TTGAAAGCGCTATCTC |
|
Position: -150
Score: 4.1 Sequence: TTGTTAACATTTTCAA
Locus tag: SLGD_01205
|
||||
| SLGD_01205 | -150 | 4.1 | TTGTTAACATTTTCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ptaA | ||||
| Ortholog function: PTS system N-acetylglucosamine-specific IIBC component | ||||
| Staphylococcus capitis SK14 | STACA0001_0618 | -168 | 4.6 | AATAAAACGTTTACAT |
| -48 | 4.3 | ATGAAAAGCATTTCAA | ||
| Staphylococcus epidermidis ATCC 12228 | SE1403 | -131 | 4.6 | AATTAAGCGTTTACAT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1332 | -44 | 4.6 | AATAAAACGTTTTCAT |
| Staphylococcus haemolyticus JCSC1435 | SH1198 | -101 | 3.9 | TCAAAAGCGCTTACAT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1037 | -86 | 4.1 | AGTAAATCGTTTACAT |
|
Position: -52
Score: 4.6 Sequence: TTGATTGCGCTTTCAT
Locus tag: SLGD_01221
|
||||
| SLGD_01221 | -52 | 4.6 | TTGATTGCGCTTTCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ald | ||||
| Ortholog function: alanine dehydrogenase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1531 | -52 | 4.5 | TTGATTGCGCTTTCAA |
| Staphylococcus capitis SK14 | STACA0001_0602 | -52 | 4.6 | ATGATTGCGCTTTCAA |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1314 | -54 | 4.6 | ATGATTGCGCTTTCAT |
| Staphylococcus haemolyticus JCSC1435 | SH1216 | -52 | 4.1 | CTGATTGCGCTTTCAT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1057 | -52 | 4.6 | TTGATTGCGCTTTCAT |
|
Position: -106
Score: 4.9 Sequence: ATTAAAACGTTTACAT
Locus tag: SLGD_01231
|
||||
| SLGD_01231 | -106 | 4.9 | ATTAAAACGTTTACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pfkA | ||||
| Ortholog function: 6-phosphofructokinase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1521 | -151 | 4.8 | TTTAAAACGTTTACAT |
| Staphylococcus capitis SK14 | STACA0001_0592 | -107 | 4.8 | TTTAAAACGTTTACAT |
| Staphylococcus epidermidis ATCC 12228 | SE1374 | -152 | 4.8 | TTTAAAACGTTTACAT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1304 | -103 | 4.6 | TATAAAACGTTTACAT |
| Staphylococcus haemolyticus JCSC1435 | SH1226 | -152 | 4.6 | TATAAAACGTTTACAT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1068 | -148 | 4.8 | TTTAAAACGTTTACAT |
| Macrococcus caseolyticus JCSC5402 | MCCL_1365 | -100 | 4.8 | TTTAAAACGTTTTCAT |
|
Position: -50
Score: 5 Sequence: TTGAAAGCGCTTACTA
Locus tag: SLGD_01405
|
||||
| SLGD_01405 | -50 | 5 | TTGAAAGCGCTTACTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: malR | ||||
| Ortholog function: maltose operon transcriptional repressor | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1339 | -43 | 4.4 | TTGGAAGCGTTTTCCA |
| Staphylococcus haemolyticus JCSC1435 | SH1407 | -159 | 5 | TTGAAAGCGTTTACTA |
| Macrococcus caseolyticus JCSC5402 | MCCL_0356 | -43 | 5 | ATGAAAACGTTTTCTT |
|
Position: -152
Score: 3.9 Sequence: ATGATAACTTTTACTT
Locus tag: SLGD_01549
|
||||
| SLGD_01549 | -152 | 3.9 | ATGATAACTTTTACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: citB | ||||
| Ortholog function: aconitate hydratase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1184 | -103 | 4.4 | AATTAAGCGTTTTCTA |
| Staphylococcus capitis SK14 | STACA0001_1597 | -103 | 4.4 | AATAAAGCGTTTTCTA |
| Staphylococcus epidermidis ATCC 12228 | SE1032 | -103 | 4.4 | AATAAAGCGTTTTCTA |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0991 | -68 | 4.5 | TTGTAATCCCTTACTT |
| Macrococcus caseolyticus JCSC5402 | MCCL_1008 | -36 | 4 | ATGTAAAGGCTTTATC |
|
Position: -28
Score: 4.7 Sequence: ATGAAAGCGTTTCCTA
Locus tag: SLGD_01572
|
||||
| SLGD_01572 | -28 | 4.7 | ATGAAAGCGTTTCCTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA1162 | ||||
| Ortholog function: hypothetical protein | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1162 | -27 | 4.4 | GTGAAAGCGCTTGCTT |
| Staphylococcus capitis SK14 | STACA0001_1569 | -30 | 4.8 | ATGAAAGCGCTTGCTT |
| Staphylococcus epidermidis ATCC 12228 | SE1007 | -29 | 4.4 | GTGAAAGCGCTTGCTA |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0968 | -30 | 4.7 | TTGTAAGCGCTTACTC |
| Staphylococcus haemolyticus JCSC1435 | SH1581 | -29 | 4.8 | ATGAAAGCGTTTCCTT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1440 | -33 | 4.7 | TTGGAAACGCTTACTT |
|
Position: -120
Score: 4.8 Sequence: TTGACAACGCTTACAT
Locus tag: SLGD_01593
|
||||
| SLGD_01593 | -120 | 4.8 | TTGACAACGCTTACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glpF | ||||
| Ortholog function: glycerol uptake facilitator | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1140 | -133 | 4.8 | TTGACAACGCTTTCAT |
| Staphylococcus capitis SK14 | STACA0001_1544 | -132 | 4.7 | TTGACAACGCTTACAA |
| Staphylococcus epidermidis ATCC 12228 | SE0977 | -130 | 4.7 | TTGACAACGCTTACAA |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0948 | -126 | 4.8 | TTGACAACGCTTTCAT |
| Staphylococcus haemolyticus JCSC1435 | SH1614 | -128 | 4.7 | TTGACAACGCTTACAA |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1461 | -145 | 4.7 | TTGACAACGCTTACAA |
| Macrococcus caseolyticus JCSC5402 | MCCL_0891 | -133 | 4.7 | TTGACAACGTTTACAT |
|
Position: -244
Score: 4.5 Sequence: GTGGAAGCGCTTTCTA
Locus tag: SLGD_01735
|
||||
| SLGD_01735 | -244 | 4.5 | GTGGAAGCGCTTTCTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sdhC | ||||
| Ortholog function: succinate dehydrogenase cytochrome b subunit | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0994 | -235 | 4.4 | GTGGAAGCGTTTTCTA |
| Staphylococcus capitis SK14 | STACA0001_2159 | -286 | 4.4 | GTGGAAGCGTTTTCTA |
| Staphylococcus epidermidis ATCC 12228 | SE0840 | -270 | 4.7 | ATGGAAGCGTTTTCTA |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0765 | -291 | 5 | TTGTAAACGCTTTCTA |
| Staphylococcus haemolyticus JCSC1435 | SH1814 | -285 | 4.7 | ATGGAAGCGTTTTCTA |
| -61 | 4 | TTGAAAAGACTTTCTT | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1648 | -232 | 4.7 | ATGGAAGCGTTTTCTA |
| Macrococcus caseolyticus JCSC5402 | MCCL_1319 | -85 | 4.5 | ATGTAATCGGTTTCTT |
|
Position: -62
Score: 4.4 Sequence: AAGTAACGGTTTTCAT
Locus tag: SLGD_01853
|
||||
| SLGD_01853 | -62 | 4.4 | AAGTAACGGTTTTCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA0873 | ||||
| Ortholog function: DJ-1/PfpI family protein | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0873 | -62 | 4.6 | ATGTAACGGTTTTCAA |
| Staphylococcus capitis SK14 | STACA0001_0121 | -62 | 4.4 | AAGTAACGGTTTTCAA |
| Staphylococcus epidermidis ATCC 12228 | SE0715 | -62 | 4.4 | AAGTAACGGTTTTCAA |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0617 | -64 | 4.4 | TTGGTAACGATTTCAT |
| Staphylococcus haemolyticus JCSC1435 | SH1944 | -93 | 4.9 | TTGTAAACCTTTTCAA |
|
Position: -296
Score: 5 Sequence: ATGTAAGGGCTTACAA
Position: -84
Score: 4.3 Sequence: ATGAAACCCCTTTAAA
Position: -41
Score: 4.3 Sequence: ATGAAAGCGAAATCAT
Locus tag: SLGD_01902
|
||||
| SLGD_01902 | -296 | 5 | ATGTAAGGGCTTACAA | |
| -84 | 4.3 | ATGAAACCCCTTTAAA | ||
| -41 | 4.3 | ATGAAAGCGAAATCAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gudB | ||||
| Ortholog function: NAD-specific glutamate dehydrogenase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0819 | -84 | 4.5 | TTGTAAGGGCTTTAAA |
| -42 | 4.3 | TTGAAAGCGAAATCAT | ||
| Staphylococcus capitis SK14 | STACA0001_0168 | -84 | 4.5 | TTGTAAACCCTTTAAA |
| -41 | 4.3 | TTGAAAGCGAAATCAT | ||
| Staphylococcus epidermidis ATCC 12228 | SE0654 | -74 | 4.1 | TTTAAAATGCTTTCAA |
| -41 | 4.3 | ATGAAAGCGAAATCAT | ||
| Staphylococcus haemolyticus JCSC1435 | SH1992 | -77 | 4.5 | TTGAAAACCCTTTAAA |
| -35 | 4.3 | ATGAAAGCGAAATCAT | ||
| Macrococcus caseolyticus JCSC5402 | MCCL_0584 | -93 | 4.6 | TTGGTAGCGTTTTCAA |
|
Position: -102
Score: 4.6 Sequence: ATGTAAGCGTTTTTAT
Locus tag: SLGD_02333
|
||||
| SLGD_02333 | -102 | 4.6 | ATGTAAGCGTTTTTAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA0511 | ||||
| Ortholog function: uncharacterized epimerase/dehydratase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0511 | -97 | 4.4 | AAGAAAGCGCTTTTAT |
| Staphylococcus capitis SK14 | STACA0001_0477 | -98 | 4.4 | AAGAAAGCGCTTTTAT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0213 | -144 | 4.4 | ATGTAAGCGCTTTACT |
| Staphylococcus haemolyticus JCSC1435 | SH2450 | -101 | 4.4 | AAGAAAGCGCTTTTAT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP2164 | -164 | 4.3 | TTGAAATCGCAATCAA |
| -98 | 3.9 | AATAAAGCGTTTTTAT | ||
| Macrococcus caseolyticus JCSC5402 | MCCL_1856 | -94 | 4.3 | ATGTAAGCGTTTCTAA |
|
Position: -73
Score: 4.6 Sequence: ATGATAAGGCTTTCAT
Locus tag: SLGD_02339
|
||||
| SLGD_02339 | -73 | 4.6 | ATGATAAGGCTTTCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: kbl | ||||
| Ortholog function: 2-amino-3-ketobutyrate coenzyme A ligase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0508 | -79 | 4.6 | ATGATAAGGCTTTCAA |
| Staphylococcus capitis SK14 | STACA0001_0483 | -73 | 4.6 | ATGATAAGGCTTTCAT |
| Staphylococcus haemolyticus JCSC1435 | SH2457 | -74 | 4.3 | ATGATAGTGCTTTCAT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP2205 | -100 | 4.8 | TAGAAAACGCTTTCTA |
|
Position: 22
Score: 4.5 Sequence: TTGGAATCGTTTTCTT
Locus tag: SLGD_02368
|
||||
| SLGD_02368 | 22 | 4.5 | TTGGAATCGTTTTCTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nupC | ||||
| Ortholog function: pyrimidine nucleoside transporter | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0479 | -63 | 4.4 | ATGTTAGCCCTTCCAT |
| Staphylococcus capitis SK14 | STACA0001_0514 | -61 | 4.3 | ATGTTAGCGCGTTCAT |
| Staphylococcus epidermidis ATCC 12228 | SE0283 | -63 | 4.2 | ATGTTAGCGTGTTCAT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP2235 | -65 | 4.2 | ATGTAAGTGCTATCAA |
| Macrococcus caseolyticus JCSC5402 | MCCL_1890 | -70 | 4 | TGTTTAGCGCTTTCAT |
|
Position: -68
Score: 5 Sequence: ATGAAAGCCTTTACAT
Locus tag: SLGD_02441
|
||||
| SLGD_02441 | -68 | 5 | ATGAAAGCCTTTACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: treP | ||||
| Ortholog function: phosphotransferase system trehalose-specific enzyme IIBC component homolog | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0432 | -68 | 4.9 | TTGAAAGCCTTTACAT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0108 | -71 | 4.9 | TTGAAAGCCTTTACAT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0109 | -71 | 4.9 | TTGAAAGCCTTTACAT |
| Staphylococcus haemolyticus JCSC1435 | SH2538 | -69 | 4.9 | ATGAAAGCCTTTACAA |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP2282 | -81 | 4.9 | ATGAAAACCTTTACAA |
| Macrococcus caseolyticus JCSC5402 | MCCL_1938 | -49 | 4.4 | TTGAAAACCCTTTCAG |