Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of CodY regulog to Staphylococcus capitis SK14

Reference regulog properties
Source regulog: CodY - Staphylococcaceae
Regulator type: Transcription factor
Regulator family: CodY
Regulation mode: repressor
Biological process: Amino acid metabolism
Effector: Branched-chain amino acids
Phylum: Firmicutes
Propagated regulon:
Target genome Staphylococcus capitis SK14
Orthologous TF(s) STACA0001_0565
Regulated genes 64
Built upon 516 sites [see more]
Predicted regulatory interactions in Staphylococcus capitis SK14
Locus tag Position Score Sequence
Position: -122
Score: 4.7
Sequence: AATTATTAAAATATT
Locus tag: STACA0001_0891
STACA0001_0891 -122 4.7 AATTATTAAAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA2398
Ortholog function: hypothetical protein
Staphylococcus aureus subsp. aureus N315 SA2398 -109 4.5 TATATTCTGATAATT
-100 4 ATAATTAAGAATTTT
Staphylococcus capitis SK14 STACA0001_0891 -131 4.3 TATTTTCTGAATTAT
-122 4.7 AATTATTAAAATATT
Staphylococcus epidermidis ATCC 12228 SE2150 -125 4.6 TATTTTCTGATAATT
-116 4.6 ATAATTTAGAATATT
Staphylococcus haemolyticus JCSC1435 SH0457 -89 5 AATTTTTAAAATATT
-80 4.8 AATATTCTAAATTTT
Position: -175
Score: 4.7
Sequence: AATATTTTAATAATT
Locus tag: STACA0001_0892
STACA0001_0892 -175 4.7 AATATTTTAATAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gabT
Ortholog function: 4-aminobutyrate aminotransferase
Staphylococcus aureus subsp. aureus N315 SA2397 -136 4 AAAATTCTTAATTAT
-127 4.5 AATTATCAGAATATA
Staphylococcus capitis SK14 STACA0001_0892 -175 4.7 AATATTTTAATAATT
-166 4.3 ATAATTCAGAAAATA
Staphylococcus epidermidis ATCC 12228 SE2148 -164 4.6 AATATTCTAAATTAT
-155 4.6 AATTATCAGAAAATA
Staphylococcus carnosus subsp. carnosus TM300 Sca_0283 -127 4.8 AAATATCTGAAAATT
Staphylococcus haemolyticus JCSC1435 SH0459 -145 4.6 ATTATTCAGAAAATA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0353 -218 4.6 ATTTTTCAGAATATA
Position: -160
Score: 4.8
Sequence: ATTTTTCAGAATTTT
Locus tag: STACA0001_0893
STACA0001_0893 -160 4.8 ATTTTTCAGAATTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA2396
Ortholog function: putative amino acid transporter
Staphylococcus aureus subsp. aureus N315 SA2396 -226 4.9 AATTGTTAGAAAATT
-103 4.8 ATTTTTCAGAATTTT
-94 4.2 AATTTTTAGACAAAA
Staphylococcus capitis SK14 STACA0001_0893 -295 4.3 AATTTGTAAAATATT
-160 4.8 ATTTTTCAGAATTTT
-151 4.2 AATTTTTAGACAAAA
Staphylococcus epidermidis ATCC 12228 SE2147 -165 4.8 ATTTTTCAGAATTTT
-156 4.2 AATTTTTAGACAAAA
Staphylococcus haemolyticus JCSC1435 SH0460 -114 5.1 AATTTTCAGAAATTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0274 -98 5.3 AATTTTCTGAATATT
-89 4.3 AATATTTAGATATAT
Position: -184
Score: 4.6
Sequence: AATTATCTAAATTTT
Locus tag: STACA0001_0926
STACA0001_0926 -184 4.6 AATTATCTAAATTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA2357
Ortholog function: putative regulatory protein
Staphylococcus aureus subsp. aureus N315 SA2357 -188 4.2 CTTTATCTAAAAATT
-179 4.7 AAAATTCAGAATTTT
Staphylococcus capitis SK14 STACA0001_0926 -184 4.6 AATTATCTAAATTTT
-175 4.4 AATTTTCTGAAAACG
Staphylococcus epidermidis ATCC 12228 SE2129 -172 5.1 AATTTTCAGAAAAAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_2043 -282 4.7 CATATTTTGAAAATT
-69 4.5 TATTATCAGAATATT
Staphylococcus haemolyticus JCSC1435 SH0484 -156 5.3 AATATTCTGAAAATT
-147 4.1 AAAATTTAGAATTTG
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0292 -65 5.3 AATATTCTGAAAATT
-56 4.2 AAAATTAAGAAAATA
Position: -93
Score: 4.6
Sequence: ACTTATCTGAAAATT
Locus tag: STACA0001_0934
STACA0001_0934 -93 4.6 ACTTATCTGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: mtnE
Ortholog function: transaminase MtnE involved in methionine biosynthesis via salvage pathway
Staphylococcus aureus subsp. aureus N315 SA2347 -205 4.8 ATTAATCTGAAAATT
Staphylococcus capitis SK14 STACA0001_0934 -212 4.2 AAATGTTTGAAAATA
-93 4.6 ACTTATCTGAAAATT
Staphylococcus epidermidis ATCC 12228 SE2122 -61 4.4 TTATTTCAGAAAATT
-52 4.5 AAAATTCTAACTATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0010 -257 4.4 AAATGTCAGAATTTT
Staphylococcus haemolyticus JCSC1435 SH0492 -253 4.5 ATAAATCTGAAAATT
-244 4.4 AAAATTATAAATATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0294 -203 4.3 AATATTCTGATAAAA
Macrococcus caseolyticus JCSC5402 MCCL_0180 -222 4.8 AATATTCTGAATACT
Position: -41
Score: 4.5
Sequence: TATATTCTAAAAAAT
Locus tag: STACA0001_0942
STACA0001_0942 -41 4.5 TATATTCTAAAAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: icaC
Ortholog function: intercellular adhesion protein C
Staphylococcus aureus subsp. aureus N315 SA2462 4 4.4 AATTTTTTAACTTTT
Staphylococcus capitis SK14 STACA0001_0085 4 4.4 AATTTTTTAACTTTT
Position: -78
Score: 5.1
Sequence: AAATTTCAGAAAATT
Locus tag: STACA0001_1021
STACA0001_1021 -78 5.1 AAATTTCAGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA2261
Ortholog function: putative p-aminobenzoyl-glutamate transporter
Staphylococcus aureus subsp. aureus N315 SA2261 -75 4.9 CATTTTCTGAAAATT
Staphylococcus capitis SK14 STACA0001_1021 -78 5.1 AAATTTCAGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_2265 -83 4.8 AATTTTCAGAATTAT
Staphylococcus haemolyticus JCSC1435 SH0589 -75 5.1 AAATTTCTGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0435 -75 4.9 TATTTTCAGAATATT
Position: -218
Score: 5.1
Sequence: AATTTTCTGAAATTT
Locus tag: STACA0001_1022
STACA0001_1022 -218 5.1 AATTTTCTGAAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA2260
Ortholog function: putative short chain dehydrogenase
Staphylococcus aureus subsp. aureus N315 SA2260 -174 4.9 AATTTTCAGAAAATG
Staphylococcus capitis SK14 STACA0001_1022 -218 5.1 AATTTTCTGAAATTT
Staphylococcus epidermidis ATCC 12228 SE2032 -218 4.6 ATTTTTCTGAAATAT
Staphylococcus haemolyticus JCSC1435 SH0590 -209 5.1 AATTTTCAGAAATTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0436 -165 4.9 AATATTCTGAAAATA
Position: -145
Score: 4.3
Sequence: CATATTCAAAATTTT
Locus tag: STACA0001_1036
STACA0001_1036 -145 4.3 CATATTCAAAATTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: opuCA
Ortholog function: glycine betaine/carnitine/choline ABC transporter opuCA
Staphylococcus capitis SK14 STACA0001_1036 -145 4.3 CATATTCAAAATTTT
Staphylococcus epidermidis ATCC 12228 SE2018 -80 4.1 ATTTGTTTAACAATT
Staphylococcus haemolyticus JCSC1435 SH0606 -134 4.1 ATTAATTAAAATTTT
Position: -252
Score: 5.2
Sequence: AATTTTCTAAAAATT
Locus tag: STACA0001_1042
STACA0001_1042 -252 5.2 AATTTTCTAAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA2233
Ortholog function: integral membrane efflux protein
Staphylococcus aureus subsp. aureus N315 SA2233 -85 4.7 AATTTTCTGCAAATT
Staphylococcus capitis SK14 STACA0001_1042 -252 5.2 AATTTTCTAAAAATT
Staphylococcus epidermidis ATCC 12228 SE2010 -246 5.2 AATTTTCTAAAAATT
Position: -166
Score: 4.8
Sequence: AATTTTTTGATTATT
Position: -157
Score: 4.7
Sequence: ATTATTCTAAAAAAT
Locus tag: STACA0001_1050
STACA0001_1050 -166 4.8 AATTTTTTGATTATT
-157 4.7 ATTATTCTAAAAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: aapA
Ortholog function: D-serine/D-alanine/glycine transporter
Staphylococcus aureus subsp. aureus N315 SA2226 -108 4.3 TATATTTAAAAAAAT
Staphylococcus aureus subsp. aureus N315 SA2227 -108 4.3 TATATTTAAAAAAAT
Staphylococcus capitis SK14 STACA0001_1050 -166 4.8 AATTTTTTGATTATT
-157 4.7 ATTATTCTAAAAAAT
Staphylococcus epidermidis ATCC 12228 SE2004 -93 4.9 ATATTTCTGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1918 -126 4.6 AATTTTCTTATAATT
Staphylococcus haemolyticus JCSC1435 SH0623 -231 5.1 AATTTTCAGAAATTT
Position: -181
Score: 5.1
Sequence: AATTTTCAGAAAAAT
Locus tag: STACA0001_1171
STACA0001_1171 -181 5.1 AATTTTCAGAAAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA2109
Ortholog function: probable amino-acid or metabolite transporter
Staphylococcus aureus subsp. aureus N315 SA2109 -183 4.7 ATTTTTTAGAAAAAT
Staphylococcus capitis SK14 STACA0001_1171 -181 5.1 AATTTTCAGAAAAAT
-101 4.1 AATTGTAAAAATTTT
Staphylococcus epidermidis ATCC 12228 SE1892 -98 4.4 AATTGTAAAAATATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1812 -468 4.4 ATTATACTGAAAATT
-414 4.4 AATATTCAAATAATA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0591 -88 4.4 AATTGTTTAAATTTT
-79 4.4 AATTTTTTGAATTTA
Position: -151
Score: 4.7
Sequence: AATATTCTGACATTT
Locus tag: STACA0001_0106
STACA0001_0106 -151 4.7 AATATTCTGACATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: comK
Ortholog function: competence transcription factor
Staphylococcus aureus subsp. aureus N315 SA0882 -147 4.9 AATATTCTGACTATT
Staphylococcus capitis SK14 STACA0001_0106 -151 4.7 AATATTCTGACATTT
Staphylococcus epidermidis ATCC 12228 SE0731 -147 4.7 AATATTCTGACATTT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0642 -145 4.6 AATATTCTGACTTTT
-136 4.1 ACTTTTTAAAAAATA
Staphylococcus haemolyticus JCSC1435 SH1926 -148 4.6 AATATTCTGACTTTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1755 -186 4.6 AATATTCAGACTTTT
-92 4.5 AAATTTATAAAAATT
Macrococcus caseolyticus JCSC5402 MCCL_1546 -195 4.8 ATAATTCTGAAAATT
-186 4.4 AAAATTTAAATTATT
-86 4.7 AAATTTCTTAAAATT
Position: -83
Score: 4.7
Sequence: AAATGTCAGAATATT
Locus tag: STACA0001_0107
STACA0001_0107 -83 4.7 AAATGTCAGAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA0883
Ortholog function: hypothetical protein
Staphylococcus aureus subsp. aureus N315 SA0883 -77 4.9 AATAGTCAGAATATT
Staphylococcus capitis SK14 STACA0001_0107 -83 4.7 AAATGTCAGAATATT
Staphylococcus epidermidis ATCC 12228 SE0729 -82 4.7 AAATGTCAGAATATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0643 -178 4.2 AATTATAAAAATAAT
-91 4.1 TATTTTTTAAAAAGT
-82 4.6 AAAAGTCAGAATATT
Staphylococcus haemolyticus JCSC1435 SH1925 -80 4.6 AAAAGTCAGAATATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1756 -174 4.5 AATTTTTATAAATTT
-80 4.6 AAAAGTCTGAATATT
Position: -27
Score: 4.6
Sequence: AATATTCTGAAAAAA
Locus tag: STACA0001_0146
STACA0001_0146 -27 4.6 AATATTCTGAAAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: oppB
Ortholog function: oligopeptide ABC transporter permease protein OppB
Staphylococcus aureus subsp. aureus N315 SA0845 -66 4.7 AGATTTCAGAAAATT
Staphylococcus capitis SK14 STACA0001_0146 -36 4.2 AATATACATAATATT
-27 4.6 AATATTCTGAAAAAA
Staphylococcus epidermidis ATCC 12228 SE0680 -63 4.9 ATATTTCTGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0588 -113 5.2 AATATTCTAAAAATT
-65 4.2 AATATTAAAATATTT
-56 4.9 ATATTTCTGAAAATT
Staphylococcus haemolyticus JCSC1435 SH1970 -116 4.7 AATTTTGTGAAAATT
-60 4.9 ATATTTCTGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1794 -56 4.8 ATATTTCTGAATATT
Macrococcus caseolyticus JCSC5402 MCCL_0605 -186 4.8 AATTTTTAAAAAAAT
-132 4.8 AATCTTCTGAAAATT
Position: -33
Score: 5
Sequence: AAAATTCTGAAAATT
Locus tag: STACA0001_0165
STACA0001_0165 -33 5 AAAATTCTGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: argG
Ortholog function: argininosuccinate synthase
Staphylococcus aureus subsp. aureus N315 SA0822 -32 4.6 AATATTCAGATAACT
Staphylococcus capitis SK14 STACA0001_0165 -33 5 AAAATTCTGAAAATT
Staphylococcus epidermidis ATCC 12228 SE0657 -180 4.5 AATTTACAGAAATTT
-171 4.3 AAATTTTAAAATATA
Staphylococcus carnosus subsp. carnosus TM300 Sca_0569 -33 4.5 AAAATTCTAACTATT
Staphylococcus haemolyticus JCSC1435 SH1989 -31 5.1 AATTTTCAGAAAAAT
Position: -43
Score: 4.7
Sequence: AATTATCAGAATTTT
Locus tag: STACA0001_0229
STACA0001_0229 -43 4.7 AATTATCAGAATTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: lysE
Ortholog function: lysine exporter protein
Staphylococcus aureus subsp. aureus N315 SA0753 -41 4.6 TTTTTTCAGAATATT
Staphylococcus capitis SK14 STACA0001_0229 -43 4.7 AATTATCAGAATTTT
Staphylococcus haemolyticus JCSC1435 SH2058 -60 4.4 TATATTCTAAATTTT
-51 4.3 AATTTTCAGATTTTA
Position: -98
Score: 4.8
Sequence: TATTTTTTGAAAATT
Locus tag: STACA0001_0301
STACA0001_0301 -98 4.8 TATTTTTTGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: tppB
Ortholog function: di-tripepride ABC transporter
Staphylococcus aureus subsp. aureus N315 SA0682 -112 4.6 AATATTCTCAATATT
-103 4.1 AATATTTTTATTTTT
Staphylococcus capitis SK14 STACA0001_0301 -124 4.3 AATTGACTGAATATT
-115 4.5 AATATTCATATTATT
-98 4.8 TATTTTTTGAAAATT
Staphylococcus epidermidis ATCC 12228 SE0509 -107 4 CTTTTTTTAAATTTT
-98 5.2 AATTTTTTGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0374 -114 5.3 AATATTCTGAAAATT
-88 4.5 TATTTTAAGAAAATT
Staphylococcus haemolyticus JCSC1435 SH2166 -102 5 AAATTTCTAAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1991 -118 4.1 AAATAACAGAATATT
-109 4.6 AATATTCTCAATATT
Macrococcus caseolyticus JCSC5402 MCCL_0478 -117 4.6 AACTTTTTGAAAATT
-36 5.3 AATTTTCAGAATATT
Position: -200
Score: 4.6
Sequence: ATTAATTAGAAAATT
Locus tag: STACA0001_0358
STACA0001_0358 -200 4.6 ATTAATTAGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA0626
Ortholog function: hypothetical protein
Staphylococcus aureus subsp. aureus N315 SA0626 -195 4.5 ATATTTTTGAAAAAT
Staphylococcus capitis SK14 STACA0001_0358 -200 4.6 ATTAATTAGAAAATT
-142 4.3 AATTTTAAGTAAATT
-98 4.2 ATAATTTTGAAAATA
Staphylococcus haemolyticus JCSC1435 SH2222 -200 4.1 TTTATTTAGAATTTT
-191 4.6 AATTTTCAGATAATA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2051 -190 5.1 AATTTTCAGAAAAAT
Position: -211
Score: 5
Sequence: AAAATTCAGAATATT
Locus tag: STACA0001_0382
STACA0001_0382 -211 5 AAAATTCAGAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA0601
Ortholog function: hypothetical protein
Staphylococcus aureus subsp. aureus N315 SA0601 -400 5 AAAATTCAGAATATT
-391 4.1 AATATTTTTAATTAT
Staphylococcus capitis SK14 STACA0001_0382 -211 5 AAAATTCAGAATATT
Staphylococcus epidermidis ATCC 12228 SE0420 -206 5 AAAATTCAGAATATT
-197 4.1 AATATTTAAATTTAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0294 -120 4.8 AATTTTCAGAATTAT
Staphylococcus haemolyticus JCSC1435 SH2248 -172 5 AAAATTCAGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2074 -166 4.8 AAATTTCAGAATTTT
Position: -33
Score: 4.4
Sequence: TAAATTCAAAATATT
Position: -24
Score: 5
Sequence: AATATTTTAAAAATT
Locus tag: STACA0001_0445
STACA0001_0445 -33 4.4 TAAATTCAAAATATT
-24 5 AATATTTTAAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SE0357
Ortholog function: hypothetical protein
Staphylococcus capitis SK14 STACA0001_0445 -33 4.4 TAAATTCAAAATATT
-24 5 AATATTTTAAAAATT
Staphylococcus epidermidis ATCC 12228 SE0357 -139 4.8 AATTTTAAAAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0240 -61 5 AATTTTCAAAAAAAT
Staphylococcus haemolyticus JCSC1435 SH2406 -248 4.5 AATTTTTTAACATTT
Position: -92
Score: 4.7
Sequence: AATATTTAGAAAACT
Locus tag: STACA0001_0476
STACA0001_0476 -92 4.7 AATATTTAGAAAACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ilvE
Ortholog function: branched-chain amino acid aminotransferase
Staphylococcus aureus subsp. aureus N315 SA0512 -92 5.2 AATTTTTAGAAAATT
Staphylococcus capitis SK14 STACA0001_0476 -101 4.4 TTTATTTTGAATATT
-92 4.7 AATATTTAGAAAACT
Staphylococcus epidermidis ATCC 12228 SE0318 -99 4.1 TCTATTTTGAATATT
-90 5.2 AATATTTAGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0215 -101 4.5 ATTTTTTTAAATTTT
-92 4.8 AATTTTCTAAAAACT
Staphylococcus haemolyticus JCSC1435 SH2449 -91 5.2 AATTTTTAGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2163 -86 5.2 AATTTTTTGAAAATT
Macrococcus caseolyticus JCSC5402 MCCL_1855 -85 4.8 AATTTTCTAAAAACT
Position: -202
Score: 4.3
Sequence: TTTTGTCAGAAAATT
Locus tag: STACA0001_1553
STACA0001_1553 -202 4.3 TTTTGTCAGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glnR
Ortholog function: HTH-type transcriptional regulator GlnR
Staphylococcus aureus subsp. aureus N315 SA1149 -187 4.4 ATTTATCAGATTATT
-178 4.2 ATTATTTTTAAAAAT
Staphylococcus capitis SK14 STACA0001_1553 -202 4.3 TTTTGTCAGAAAATT
-191 4.1 AATTATAAAATTATT
-150 4.2 ATTAATTAAAAATTT
Staphylococcus epidermidis ATCC 12228 SE0986 -194 4.8 AAATGTCTGAAAATT
-185 4.7 AAAATTTTAAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0958 -157 4.8 AATTTACAGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1452 -179 4.2 ATTTTTTTGAATAAA
-157 4.9 AATTTTCTAATAATT
-56 4.4 ATTAATCTGATTATT
Position: -154
Score: 4.7
Sequence: AATATTCAGAATTAT
Locus tag: STACA0001_1558
STACA0001_1558 -154 4.7 AATATTCAGAATTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ltaE
Ortholog function: low specificity L-threonine aldolase
Staphylococcus capitis SK14 STACA0001_1558 -154 4.7 AATATTCAGAATTAT
Staphylococcus epidermidis ATCC 12228 SE0995 -149 5 AATATTCAGAAATTT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1514 -101 5.3 AATTTTCTGAATATT
Position: -178
Score: 4.7
Sequence: ATAATTCTGAATATT
Locus tag: STACA0001_1559
STACA0001_1559 -178 4.7 ATAATTCTGAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SAS040
Ortholog function: hypothetical protein
Staphylococcus capitis SK14 STACA0001_1559 -178 4.7 ATAATTCTGAATATT
Staphylococcus epidermidis ATCC 12228 SE0996 -179 5 AAATTTCTGAATATT
Staphylococcus haemolyticus JCSC1435 SH1591 -194 4.3 AATAATTTAATTATT
-185 5.1 ATTATTCTGAAAATT
-123 4.5 AATATTTTAAATATA
Position: -112
Score: 4.3
Sequence: ATTATTCTTAATTTT
Position: -33
Score: 4.7
Sequence: AATTTTCTGATTTTT
Locus tag: STACA0001_1570
STACA0001_1570 -112 4.3 ATTATTCTTAATTTT
-33 4.7 AATTTTCTGATTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: thrA
Ortholog function: aspartokinase III
Staphylococcus aureus subsp. aureus N315 SA1163 -87 4.6 AATATTCAAAATATA
-35 4.7 AATTTTCTGATTTTT
Staphylococcus capitis SK14 STACA0001_1570 -33 4.7 AATTTTCTGATTTTT
Staphylococcus epidermidis ATCC 12228 SE1008 -33 4.7 AATTTTCTGATTTTT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0969 -97 4.4 AAAGTTCAAAAAATT
-79 4.2 AATATGTTGAAATTT
Staphylococcus haemolyticus JCSC1435 SH1580 -35 4.7 AATTTTCTGATTTTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1439 -35 4.7 AATTTTCTGATTTTT
Position: -170
Score: 4.7
Sequence: AAAAATCAGAAAATT
Position: -91
Score: 4.3
Sequence: AAAATTAAGAATAAT
Locus tag: STACA0001_1571
STACA0001_1571 -170 4.7 AAAAATCAGAAAATT
-91 4.3 AAAATTAAGAATAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hom
Ortholog function: homoserine dehydrogenase
Staphylococcus aureus subsp. aureus N315 SA1164 -170 4.7 AAAAATCAGAAAATT
-118 4.6 TATATTTTGAATATT
Staphylococcus capitis SK14 STACA0001_1571 -170 4.7 AAAAATCAGAAAATT
-91 4.3 AAAATTAAGAATAAT
Staphylococcus epidermidis ATCC 12228 SE1009 -170 4.7 AAAAATCAGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0970 -127 4.2 AAATTTCAACATATT
-109 4.4 AATTTTTTGAACTTT
Staphylococcus haemolyticus JCSC1435 SH1579 -178 4.7 AAAAATCAGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1438 -168 4.7 AAAAATCAGAAAATT
Position: -112
Score: 5.1
Sequence: AAATTTCAGAAAATT
Position: -102
Score: 4.7
Sequence: AAATTTTTAAATATT
Position: -101
Score: 4.5
Sequence: AATTTTTAAATATTT
Locus tag: STACA0001_1576
STACA0001_1576 -112 5.1 AAATTTCAGAAAATT
-102 4.7 AAATTTTTAAATATT
-101 4.5 AATTTTTAAATATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: rocC
Ortholog function: amino acid permease
Staphylococcus aureus subsp. aureus N315 SA1169 -110 4.7 AAAAATCAGAAAATT
-101 4.1 AAAATTTTAATTTTT
Staphylococcus capitis SK14 STACA0001_1576 -112 5.1 AAATTTCAGAAAATT
-102 4.7 AAATTTTTAAATATT
Staphylococcus epidermidis ATCC 12228 SE1015 -112 4.6 AAATATCAGAAAAAT
-103 4.1 AAAAATTTAACAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0975 -121 4.3 TTTTTTCAGAATTTT
-112 4.7 AATTTTTTAAATTTT
Staphylococcus haemolyticus JCSC1435 SH1574 -114 5.1 AAATTTCAGAAAATT
-105 4.4 AAAATTTAAAATTTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1433 -111 4.4 AATATTTAAACATTT
Macrococcus caseolyticus JCSC5402 MCCL_0990 -56 4.4 AATTTTCTTAATTAT
Position: -132
Score: 4.5
Sequence: AAATATTTAAAAATT
Position: -131
Score: 4.7
Sequence: AATATTTAAAAATTT
Position: -121
Score: 5.1
Sequence: AATTTTCTGAAATTT
Locus tag: STACA0001_1577
STACA0001_1577 -132 4.5 AAATATTTAAAAATT
-131 4.7 AATATTTAAAAATTT
-121 5.1 AATTTTCTGAAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: katA
Ortholog function: catalase
Staphylococcus aureus subsp. aureus N315 SA1170 -111 4.1 AAAAATTAAAATTTT
-102 4.7 AATTTTCTGATTTTT
Staphylococcus capitis SK14 STACA0001_1577 -131 4.7 AATATTTAAAAATTT
-121 5.1 AATTTTCTGAAATTT
Staphylococcus epidermidis ATCC 12228 SE1016 -142 4.1 AATTGTTAAATTTTT
-133 4.6 ATTTTTCTGATATTT
Staphylococcus carnosus subsp. carnosus TM300 Sca_2336 -28 4.1 ATTATTCTAAATAAG
Staphylococcus haemolyticus JCSC1435 SH1573 -123 4.4 AAAATTTTAAATTTT
-114 5.1 AATTTTCTGAAATTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1432 -129 4.4 AAATGTTTAAATATT
Position: -35
Score: 4.8
Sequence: ACTATTCTGAAAATT
Locus tag: STACA0001_1611
STACA0001_1611 -35 4.8 ACTATTCTGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: tyrA
Ortholog function: prephenate dehydrogenase
Staphylococcus aureus subsp. aureus N315 SA1197 -34 5.1 ATTATTCTGAAAATT
Staphylococcus capitis SK14 STACA0001_1611 -35 4.8 ACTATTCTGAAAATT
Staphylococcus epidermidis ATCC 12228 SE1047 -251 4.4 AATTATCTGATTTTT
-242 4.6 ATTTTTCTAATTATT
-35 4.4 GTTATTCTGAAAATT
Staphylococcus haemolyticus JCSC1435 SH1544 -35 4.8 CATATTCTGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1387 -36 4.8 ACTATTCTGAAAATT
Position: -93
Score: 4.2
Sequence: AATATTACGAATATT
Locus tag: STACA0001_1613
STACA0001_1613 -93 4.2 AATATTACGAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: trpE
Ortholog function: anthranilate synthase component I
Staphylococcus aureus subsp. aureus N315 SA1199 -439 4.5 AATAATTAGAATTTT
Staphylococcus capitis SK14 STACA0001_1613 -438 4.6 AATAATTAGAAAAAT
-429 4.4 AAAAATCAGATAATT
Staphylococcus epidermidis ATCC 12228 SE1048 -431 4.6 AATAATTAGAAAAAT
-422 4.4 AAAAATCAGATAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1012 -464 4.3 CATTATTAAAAAATT
Staphylococcus haemolyticus JCSC1435 SH1542 -453 4.3 AAATATCAAACAATT
Position: -347
Score: 4.3
Sequence: AATTGTCAGTATATT
Position: -338
Score: 4
Sequence: TATATTTTTAAAAAT
Position: -232
Score: 4
Sequence: AAATTTTAGTATTTT
Locus tag: STACA0001_1639
STACA0001_1639 -347 4.3 AATTGTCAGTATATT
-338 4 TATATTTTTAAAAAT
-232 4 AAATTTTAGTATTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: lysC
Ortholog function: aspartokinase II
Staphylococcus carnosus subsp. carnosus TM300 Sca_1037 -340 4.3 AAATTTCTAAAAATC
Staphylococcus haemolyticus JCSC1435 SH1518 -344 4.1 ATTTTTCAGTCTATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1357 -350 4.5 ATTTTTCAGTAAATT
-341 4.3 TAAATTTAAAAAATT
Position: -44
Score: 5
Sequence: AATTTTCTTAAAATT
Locus tag: STACA0001_1640
STACA0001_1640 -44 5 AATTTTCTTAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: asd
Ortholog function: aspartate semialdehyde dehydrogenase
Staphylococcus aureus subsp. aureus N315 SA1226 -45 5.2 AATATTCTAAAAATT
Staphylococcus capitis SK14 STACA0001_1640 -44 5 AATTTTCTTAAAATT
Staphylococcus epidermidis ATCC 12228 SE1074 -46 5.2 AATTTTCTAAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1038 -340 4.3 AAATTTCTAAAAATC
Staphylococcus haemolyticus JCSC1435 SH1517 -42 4.8 AATTTTTTTAAAATT
-33 4.3 AAAATTCAAACAAAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1356 -350 4.5 ATTTTTCAGTAAATT
-341 4.3 TAAATTTAAAAAATT
Position: -85
Score: 4.7
Sequence: AATTTTCTGAAATTA
Locus tag: STACA0001_1652
STACA0001_1652 -85 4.7 AATTTTCTGAAATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: braB
Ortholog function: branched-chain amino acid transport system
Staphylococcus capitis SK14 STACA0001_1652 -85 4.7 AATTTTCTGAAATTA
Staphylococcus epidermidis ATCC 12228 SE1090 -87 5.1 AATTTTCTGAAATTT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1051 -96 4.7 AATTTTCAGAAAGTT
Staphylococcus haemolyticus JCSC1435 SH1502 -87 4.2 AATTTTCTGAAATCA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1343 -95 4.5 ATATTTTTAAATATT
-86 5 AATATTCTGAAATTT
Macrococcus caseolyticus JCSC5402 MCCL_1059 -84 4.9 AATATTCAGAAAATA
Position: -109
Score: 4.6
Sequence: ATTTATCAAAATATT
Locus tag: STACA0001_1770
STACA0001_1770 -109 4.6 ATTTATCAAAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA1363
Ortholog function: Lipoate-protein ligase A
Staphylococcus aureus subsp. aureus N315 SA1363 -106 4.8 AATTATCAAAATATT
Staphylococcus capitis SK14 STACA0001_1770 -109 4.6 ATTTATCAAAATATT
Staphylococcus epidermidis ATCC 12228 SE1217 -108 4.6 ATTTATCAAAATATT
Staphylococcus haemolyticus JCSC1435 SH1383 -100 4.3 ATTTATCAAAATTTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1222 -121 4.6 ATTTATCAAAATATT
Position: -66
Score: 4.6
Sequence: AATATTTTGATAAAT
Locus tag: STACA0001_1771
STACA0001_1771 -66 4.6 AATATTTTGATAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA1364
Ortholog function: putative sulfurtransferase
Staphylococcus aureus subsp. aureus N315 SA1364 -66 4.8 AATATTTTGATAATT
Staphylococcus capitis SK14 STACA0001_1771 -66 4.6 AATATTTTGATAAAT
Staphylococcus epidermidis ATCC 12228 SE1218 -66 4.6 AATATTTTGATAAAT
Staphylococcus haemolyticus JCSC1435 SH1382 -66 4.3 AAAATTTTGATAAAT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1221 -67 4.6 AATATTTTGATAAAT
Position: -219
Score: 4.3
Sequence: TATTTTCAAAAAACT
Position: -184
Score: 4.2
Sequence: AATGGTCTGAAAAAT
Locus tag: STACA0001_1791
STACA0001_1791 -219 4.3 TATTTTCAAAAAACT
-184 4.2 AATGGTCTGAAAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sodA
Ortholog function: superoxide dismutase SodA
Staphylococcus aureus subsp. aureus N315 SA1382 -140 4.1 AAATGTTTAATTATT
Staphylococcus capitis SK14 STACA0001_1791 -219 4.3 TATTTTCAAAAAACT
-184 4.2 AATGGTCTGAAAAAT
Staphylococcus epidermidis ATCC 12228 SE1240 -101 4.4 AATAATTTAATAATT
Staphylococcus haemolyticus JCSC1435 SH1363 -248 4.3 AATTATTTAAAAATA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1203 -182 4.2 AATTTTTAAAATTGT
Position: -236
Score: 4.6
Sequence: ATTAATTAGAAAATT
Position: -227
Score: 4.6
Sequence: AAAATTCAGACTATT
Locus tag: STACA0001_1363
STACA0001_1363 -236 4.6 ATTAATTAGAAAATT
-227 4.6 AAAATTCAGACTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: metX
Ortholog function: homoserine-o-acetyltransferase
Staphylococcus aureus subsp. aureus N315 SA0011 -293 4.6 AGTAATCAGAAAATT
Staphylococcus capitis SK14 STACA0001_1363 -236 4.6 ATTAATTAGAAAATT
-227 4.6 AAAATTCAGACTATT
Staphylococcus epidermidis ATCC 12228 SE0011 -233 4.8 AATAATTAGAAAATT
-224 4.5 AAAATTTAGACTATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0012 -230 4.8 AATAATTAGAAAATT
-221 4 AAAATTATGATATTT
Position: -209
Score: 4.9
Sequence: ACTTTTCTGAAAATT
Position: -75
Score: 4.8
Sequence: AATTTTTAAAATAAT
Locus tag: STACA0001_1417
STACA0001_1417 -209 4.9 ACTTTTCTGAAAATT
-75 4.8 AATTTTTAAAATAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA0348
Ortholog function: putative transcriptional regulator
Staphylococcus aureus subsp. aureus N315 SA0348 -176 5.1 ATTATTCAGAAAATT
Staphylococcus capitis SK14 STACA0001_1417 -209 4.9 ACTTTTCTGAAAATT
-75 4.8 AATTTTTAAAATAAT
Staphylococcus epidermidis ATCC 12228 SE2378 -210 5.1 ATTTTTCTGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0015 -192 5.1 AATTTTCAGAATAAT
-115 4.9 AATTTTTTGAATTTT
Staphylococcus haemolyticus JCSC1435 SH2634 -279 4.9 ACTTTTCTGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2412 -127 4.6 ACTTATCTGAAAATT
Position: -29
Score: 4.8
Sequence: AATTTTCAGATATTT
Locus tag: STACA0001_1448
STACA0001_1448 -29 4.8 AATTTTCAGATATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SE2356
Ortholog function: 2-oxo-hepta-3-ene-1,7-dioate hydratase
Staphylococcus capitis SK14 STACA0001_1448 -29 4.8 AATTTTCAGATATTT
Staphylococcus epidermidis ATCC 12228 SE2356 -32 5.1 AATTTTCAGATAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0040 -34 4.3 AATAATATAAATATT
Staphylococcus haemolyticus JCSC1435 SH2591 -28 4.8 AATTTTCAGATATTT
Position: -145
Score: 4.8
Sequence: AAATATCTGAAAATT
Locus tag: STACA0001_1449
STACA0001_1449 -145 4.8 AAATATCTGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA0367
Ortholog function: putative NADPH-flavin oxidoreductase
Staphylococcus aureus subsp. aureus N315 SA0367 -121 4.2 AATATTTTTAAAAGT
Staphylococcus capitis SK14 STACA0001_1449 -145 4.8 AAATATCTGAAAATT
Staphylococcus epidermidis ATCC 12228 SE2355 -114 5.1 AATTATCTGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0041 -140 4.3 AATATTTATATTATT
Staphylococcus haemolyticus JCSC1435 SH2590 -144 4.8 AAATATCTGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2331 -193 4.3 AATAATTTAACTATT
Position: -133
Score: 5.1
Sequence: ATTATTCAGAAAATT
Locus tag: STACA0001_1450
STACA0001_1450 -133 5.1 ATTATTCAGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: tcyP
Ortholog function: L-cystine uptake protein tcyP
Staphylococcus aureus subsp. aureus N315 SA0368 -72 4.3 AATATTTTAAAATTA
-29 4.4 TATATTCAAAAATTT
Staphylococcus capitis SK14 STACA0001_1450 -133 5.1 ATTATTCAGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2329 -138 4.6 AATTATCAGAAAATA
Position: -179
Score: 5
Sequence: AATTTTCTGACAATT
Position: -41
Score: 4.6
Sequence: AAATTTTAGAATTTT
Locus tag: STACA0001_1493
STACA0001_1493 -179 5 AATTTTCTGACAATT
-41 4.6 AAATTTTAGAATTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gltC
Ortholog function: transcription activator of glutamate synthase operon
Staphylococcus aureus subsp. aureus N315 SA0429 -169 4.4 CTTTTTTAGAATATT
-160 4.3 AATATTCTGATATTA
Staphylococcus capitis SK14 STACA0001_1493 -179 5 AATTTTCTGACAATT
-41 4.6 AAATTTTAGAATTTT
Staphylococcus epidermidis ATCC 12228 SE2313 -171 5 AATTTTCTGACAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0104 -113 4.7 AATTTTCAGATTTTT
-39 4.5 ATTATTCTAATTATT
Staphylococcus haemolyticus JCSC1435 SH2541 -138 5.4 AATTTTCAGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2285 -118 5 AAAATTCTGAAAATT
Position: -174
Score: 4.6
Sequence: AAAATTCTAAAATTT
Position: -36
Score: 5
Sequence: AATTGTCAGAAAATT
Locus tag: STACA0001_1494
STACA0001_1494 -174 4.6 AAAATTCTAAAATTT
-36 5 AATTGTCAGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gltB
Ortholog function: glutamate synthase large subunit
Staphylococcus aureus subsp. aureus N315 SA0430 -35 4.3 TAATATCAGAATATT
-26 4.4 AATATTCTAAAAAAG
Staphylococcus capitis SK14 STACA0001_1494 -174 4.6 AAAATTCTAAAATTT
-36 5 AATTGTCAGAAAATT
Staphylococcus epidermidis ATCC 12228 SE2312 -35 5 AATTGTCAGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0105 -117 4.5 AATAATTAGAATAAT
-43 4.7 AAAAATCTGAAAATT
Staphylococcus haemolyticus JCSC1435 SH2540 -34 5.4 AATTTTCTGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2284 -34 5 AATTTTCAGAATTTT
Position: -53
Score: 5.2
Sequence: AATATTCAGAATATT
Locus tag: STACA0001_0615
STACA0001_0615 -53 5.2 AATATTCAGAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SA1544
Ortholog function: putative phosphoserine transaminase
Staphylococcus aureus subsp. aureus N315 SA1544 -54 5.4 AATTTTCAGAAAATT
Staphylococcus capitis SK14 STACA0001_0615 -53 5.2 AATATTCAGAATATT
Staphylococcus epidermidis ATCC 12228 SE1400 -54 5 AATATTCAGAATTTT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1329 -55 4.9 TATTTTCAGAATATT
Staphylococcus haemolyticus JCSC1435 SH1201 -55 5 AATTATCAGAATATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1040 -55 4.9 TATTTTCTGAAAATT
Position: -78
Score: 4.3
Sequence: AGATTTTTGAAAAAT
Position: -69
Score: 4.1
Sequence: AAAAATGTGAAAATT
Locus tag: STACA0001_0626
STACA0001_0626 -78 4.3 AGATTTTTGAAAAAT
-69 4.1 AAAAATGTGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: acsA
Ortholog function: acetyl-CoA synthetase
Staphylococcus aureus subsp. aureus N315 SA1554 -78 4.6 AAAATTTTGAATAAT
-69 4.1 AATAATTAGAAATGT
Staphylococcus capitis SK14 STACA0001_0626 -78 4.3 AGATTTTTGAAAAAT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1338 -96 4.2 AAAAATCAGAATTAT
-87 4.1 AATTATCATAATTAT
Staphylococcus haemolyticus JCSC1435 SH1189 -87 4.9 AATTATCTAAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1030 -75 4.9 ATTATTTTGAAAATT
Macrococcus caseolyticus JCSC5402 MCCL_1409 -48 4.5 TATATTTTGAAAAAT
Position: -119
Score: 4.1
Sequence: AATTTTCACATTTTT
Position: -110
Score: 4.3
Sequence: ATTTTTCAAAAATCT
Locus tag: STACA0001_0627
STACA0001_0627 -119 4.1 AATTTTCACATTTTT
-110 4.3 ATTTTTCAAAAATCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: acuA
Ortholog function: hypothetical protein
Staphylococcus aureus subsp. aureus N315 SA1555 -114 4.1 ACATTTCTAATTATT
-105 4.6 ATTATTCAAAATTTT
-56 4.3 AATTTTCTATATAAT
Staphylococcus capitis SK14 STACA0001_0627 -110 4.3 ATTTTTCAAAAATCT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1339 -159 4.1 ATAATTATGATAATT
-150 4.2 ATAATTCTGATTTTT
Staphylococcus haemolyticus JCSC1435 SH1188 -92 4.9 AATTTTTAGATAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1029 -119 4.9 AATTTTCAAAATAAT
Macrococcus caseolyticus JCSC5402 MCCL_1410 -39 4.5 ATTTTTCAAAATATA
Position: 6
Score: 4.2
Sequence: AAAATTATTAAAATT
Position: 8
Score: 4
Sequence: AATTATTAAAATTCT
Locus tag: STACA0001_0720
STACA0001_0720 6 4.2 AAAATTATTAAAATT
8 4 AATTATTAAAATTCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: artQ
Ortholog function: Arginine ABC transport system ArtQ
Staphylococcus aureus subsp. aureus N315 SA1675 -167 4.3 ATAATTATGAATATT
Staphylococcus capitis SK14 STACA0001_0720 6 4.2 AAAATTATTAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1432 -83 5.1 AAATTTCAGAAAATT
-74 4 AAAATTTAAAAATTA
Staphylococcus haemolyticus JCSC1435 SH1104 -72 4 CTTTTTTAAAATTTT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0937 -63 4.2 ATTATATTGAATATT
Macrococcus caseolyticus JCSC5402 MCCL_1584 -87 4.3 AATTATTAGAACATT
Position: -81
Score: 4.7
Sequence: TTTTTTCTGAAAATT
Locus tag: STACA0001_0024
STACA0001_0024 -81 4.7 TTTTTTCTGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: brnQ1
Ortholog function: branched-chain amino acid transport system
Staphylococcus aureus subsp. aureus N315 SA0180 -117 5.2 AATTTTCAAAAAATT
Staphylococcus capitis SK14 STACA0001_0024 -81 4.7 TTTTTTCTGAAAATT
Staphylococcus epidermidis ATCC 12228 SE0217 -173 4.4 AATATTAAAAATTTT
Staphylococcus haemolyticus JCSC1435 SH0145 -81 4.5 AATTTATTGAATATT
Macrococcus caseolyticus JCSC5402 MCCL_0050 -86 4.5 AATTTTTTAATTAAT
-77 4.8 ATTAATCAGAAAATT
Position: 4
Score: 4.4
Sequence: AATTTTTTAACTTTT
Locus tag: STACA0001_0088
STACA0001_0088 4 4.4 AATTTTTTAACTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: icaA
Ortholog function: intercellular adhesion protein A
Staphylococcus aureus subsp. aureus N315 SA2459 4 4.4 AATTTTTTAACTTTT
Staphylococcus capitis SK14 STACA0001_0088 4 4.4 AATTTTTTAACTTTT
Position: -282
Score: 4.8
Sequence: ATTATTTTAAAAATT
Position: -42
Score: 4.6
Sequence: ATTAGTTAGAAAATT
Position: -33
Score: 4.4
Sequence: AAAATTCAAAAAATA
Locus tag: STACA0001_2249
STACA0001_2249 -282 4.8 ATTATTTTAAAAATT
-42 4.6 ATTAGTTAGAAAATT
-33 4.4 AAAATTCAAAAAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pycA
Ortholog function: pyruvate carboxylase
Staphylococcus aureus subsp. aureus N315 SA0963 -41 4.6 ATTAGTTAGAAAATT
Staphylococcus capitis SK14 STACA0001_2249 -42 4.6 ATTAGTTAGAAAATT
-33 4.4 AAAATTCAAAAAATA
Staphylococcus epidermidis ATCC 12228 SE0813 -40 4.1 TATTATCTAATTATT
-31 4.9 ATTATTTAGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0740 -34 4.6 AAAATTCAAATAATT
Staphylococcus haemolyticus JCSC1435 SH1838 -41 4.5 ATTAGTTAGAATATT
-32 4 AATATTCAAACTTTA
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1675 -38 4.7 ACTTTTTAGAAAATT
-29 4.1 AAAATTCAAAATTTA
Position: -58
Score: 4.1
Sequence: ACTATTTTAACAATT
Position: 19
Score: 4.1
Sequence: CAAATTCAAAATTTT
Locus tag: STACA0001_2317
STACA0001_2317 -58 4.1 ACTATTTTAACAATT
19 4.1 CAAATTCAAAATTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: patA
Ortholog function: putative aminotransferase A
Staphylococcus aureus subsp. aureus N315 SA0902 -50 4.2 TAATTTCTAAATTTT
-41 4.4 AATTTTTAGACAATA
Staphylococcus capitis SK14 STACA0001_2317 -58 4.1 ACTATTTTAACAATT
Staphylococcus epidermidis ATCC 12228 SE0747 -59 4.1 ACTATTTAAACAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0656 -108 4.2 TTTATTCTAAAATTT
Staphylococcus haemolyticus JCSC1435 SH1916 -65 4.9 ATTATTCTAAAAATT
Macrococcus caseolyticus JCSC5402 MCCL_1585 -86 4.3 AATGTTCTAATAATT
Position: -270
Score: 4.1
Sequence: AATTTTGAAAAAAGT
Position: -235
Score: 4.6
Sequence: AATTGTAAGAAAATT
Locus tag: STACA0001_0837
STACA0001_0837 -270 4.1 AATTTTGAAAAAAGT
-235 4.6 AATTGTAAGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hmrA
Ortholog function: N-acyl-L-amino acid amidohydrolase
Staphylococcus aureus subsp. aureus N315 SA1935 -143 4.5 AGTTATTAGAAAATT
Staphylococcus capitis SK14 STACA0001_0837 -235 4.6 AATTGTAAGAAAATT
Staphylococcus epidermidis ATCC 12228 SE1731 -113 4.6 AATTGTAAGAAAATT
-102 4.2 AATTGTGTAAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1636 -176 4.1 AATTTATTAAATTTT
Staphylococcus haemolyticus JCSC1435 SH0902 -179 4.7 AATTTTCAAAATTAT
-52 4.5 AATATCCAAAATATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0752 -190 4.1 TATTTTTATAAATTT
-181 4.6 AAATTTCAGAAAATG
Position: -72
Score: 4.7
Sequence: ATTATTCTGACAATT
Locus tag: STACA0001_1812
STACA0001_1812 -72 4.7 ATTATTCTGACAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cysH
Ortholog function: 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase
Staphylococcus capitis SK14 STACA0001_1812 -72 4.7 ATTATTCTGACAATT
Staphylococcus epidermidis ATCC 12228 SE2181 -69 4.7 ATTATTCTGACAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_0058 -80 4.6 TATTTTCAGACAATT
Staphylococcus haemolyticus JCSC1435 SH0413 -69 4.7 ATTATTCTGACAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP2409 -80 4.5 TATTTTCAAATAATT
Position: 7
Score: 4.4
Sequence: ATTTTTCAAAATATG
Locus tag: STACA0001_1850
STACA0001_1850 7 4.4 ATTTTTCAAAATATG
Supported by regulated orthologs from reference regulons
Ortholog gene name: aur
Ortholog function: zinc metalloproteinase aureolysin
Staphylococcus aureus subsp. aureus N315 SA2430 -68 4.6 ACTTTTCTGAAAAAT
Staphylococcus capitis SK14 STACA0001_1850 -30 4.2 CTTTTTCAAAAATTT
7 4.4 ATTTTTCAAAATATG
Staphylococcus epidermidis ATCC 12228 SE2219 -69 4.9 ACTTTTCAGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP1542 -104 4.3 ATAATTCAAAATAAT
Position: -49
Score: 5.2
Sequence: AATATTTTGAAAATT
Locus tag: STACA0001_0523
STACA0001_0523 -49 5.2 AATATTTTGAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ilvC
Ortholog function: alpha-keto-beta-hydroxylacil reductoisomerase
Staphylococcus aureus subsp. aureus N315 SA1861 -301 4.9 AATTTTTAGACAATT
-53 4.5 ATATTTCAGAATTTT
Staphylococcus capitis SK14 STACA0001_0523 -49 5.2 AATATTTTGAAAATT
-40 4.3 AAAATTAAGAATTTT
Staphylococcus epidermidis ATCC 12228 SE1657 -50 4.9 ATTATTTTGAAAATT
Staphylococcus carnosus subsp. carnosus TM300 Sca_1562 -52 4.8 AAAATTCTAAATATT
Staphylococcus haemolyticus JCSC1435 SH0977 -54 4.9 AATTTTAAGAATATT
-45 5.1 AATATTCTAAATATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0822 -323 4.2 AATTGACAGAAAAAT
-266 4 ATTTATCAAATTTTT
-258 4.7 AATTTTTAGATATTT
-249 4.1 ATATTTCAAACAAAT
Macrococcus caseolyticus JCSC5402 MCCL_0858 -266 5.2 AATTTTTAGAAAATT
-257 4.7 AAAATTTTAAATATT
Position: -327
Score: 4.9
Sequence: AATTGTTAGAAAATT
Position: -262
Score: 4.6
Sequence: AATTTTAAGACAATT
Locus tag: STACA0001_0526
STACA0001_0526 -327 4.9 AATTGTTAGAAAATT
-262 4.6 AATTTTAAGACAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ilvD
Ortholog function: dihydroxy-acid dehydratase
Staphylococcus aureus subsp. aureus N315 SA1858 -301 4.9 AATTTTTAGACAATT
-53 4.5 ATATTTCAGAATTTT
Staphylococcus capitis SK14 STACA0001_0526 -327 4.9 AATTGTTAGAAAATT
Staphylococcus epidermidis ATCC 12228 SE1654 -330 5.2 AATTTTTAGAAAATT
-321 4.1 AAAATTCTAAATTTA
Staphylococcus carnosus subsp. carnosus TM300 Sca_1559 -316 4.8 AATTTTAAAAAAATT
-307 4.3 AAAATTCTAATAAAT
Staphylococcus haemolyticus JCSC1435 SH0980 -321 4.4 AGTTGTTAGAAAATT
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 SSP0825 -323 4.2 AATTGACAGAAAAAT
-266 4 ATTTATCAAATTTTT
-258 4.7 AATTTTTAGATATTT
-249 4.1 ATATTTCAAACAAAT
Macrococcus caseolyticus JCSC5402 MCCL_0860 -266 5.2 AATTTTTAGAAAATT
-257 4.7 AAAATTTTAAATATT
Position: 28
Score: 4.1
Sequence: AATTTGCTAACTATT
Locus tag: STACA0001_2130
STACA0001_2130 28 4.1 AATTTGCTAACTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: agrB
Ortholog function: accessory gene regulator B
Staphylococcus aureus subsp. aureus N315 SA1842 -261 4.6 AAAATTCTTAAAATT
Staphylococcus haemolyticus JCSC1435 SH0996 -124 4.1 ATATGTTAAAATATT
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