Propagation of CodY regulog to Staphylococcus epidermidis RP62A
| Source regulog: | CodY - Staphylococcaceae |
| Regulator type: | Transcription factor |
| Regulator family: | CodY |
| Regulation mode: | repressor |
| Biological process: | Amino acid metabolism |
| Effector: | Branched-chain amino acids |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Staphylococcus epidermidis RP62A |
| Orthologous TF(s) | SERP0821 |
| Regulated genes | 65 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -210
Score: 5.1 Sequence: ATTTTTCTGAAAATT
Locus tag: SERP0038
|
||||
| SERP0038 | -210 | 5.1 | ATTTTTCTGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA0348 | ||||
| Ortholog function: putative transcriptional regulator | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0348 | -176 | 5.1 | ATTATTCAGAAAATT |
| Staphylococcus capitis SK14 | STACA0001_1417 | -209 | 4.9 | ACTTTTCTGAAAATT |
| -75 | 4.8 | AATTTTTAAAATAAT | ||
| Staphylococcus epidermidis ATCC 12228 | SE2378 | -210 | 5.1 | ATTTTTCTGAAAATT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0015 | -192 | 5.1 | AATTTTCAGAATAAT |
| -115 | 4.9 | AATTTTTTGAATTTT | ||
| Staphylococcus haemolyticus JCSC1435 | SH2634 | -279 | 4.9 | ACTTTTCTGAAAATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP2412 | -127 | 4.6 | ACTTATCTGAAAATT |
|
Position: -32
Score: 5.1 Sequence: AATTTTCAGATAATT
Locus tag: SERP0061
|
||||
| SERP0061 | -32 | 5.1 | AATTTTCAGATAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SE2356 | ||||
| Ortholog function: 2-oxo-hepta-3-ene-1,7-dioate hydratase | ||||
| Staphylococcus capitis SK14 | STACA0001_1448 | -29 | 4.8 | AATTTTCAGATATTT |
| Staphylococcus epidermidis ATCC 12228 | SE2356 | -32 | 5.1 | AATTTTCAGATAATT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0040 | -34 | 4.3 | AATAATATAAATATT |
| Staphylococcus haemolyticus JCSC1435 | SH2591 | -28 | 4.8 | AATTTTCAGATATTT |
|
Position: -123
Score: 5.1 Sequence: AATTATCTGAAAATT
Locus tag: SERP0062
|
||||
| SERP0062 | -123 | 5.1 | AATTATCTGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA0367 | ||||
| Ortholog function: putative NADPH-flavin oxidoreductase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0367 | -121 | 4.2 | AATATTTTTAAAAGT |
| Staphylococcus capitis SK14 | STACA0001_1449 | -145 | 4.8 | AAATATCTGAAAATT |
| Staphylococcus epidermidis ATCC 12228 | SE2355 | -114 | 5.1 | AATTATCTGAAAATT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0041 | -140 | 4.3 | AATATTTATATTATT |
| Staphylococcus haemolyticus JCSC1435 | SH2590 | -144 | 4.8 | AAATATCTGAAAATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP2331 | -193 | 4.3 | AATAATTTAACTATT |
|
Position: -171
Score: 5 Sequence: AATTTTCTGACAATT
Locus tag: SERP0107
|
||||
| SERP0107 | -171 | 5 | AATTTTCTGACAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gltC | ||||
| Ortholog function: transcription activator of glutamate synthase operon | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0429 | -169 | 4.4 | CTTTTTTAGAATATT |
| -160 | 4.3 | AATATTCTGATATTA | ||
| Staphylococcus capitis SK14 | STACA0001_1493 | -179 | 5 | AATTTTCTGACAATT |
| -41 | 4.6 | AAATTTTAGAATTTT | ||
| Staphylococcus epidermidis ATCC 12228 | SE2313 | -171 | 5 | AATTTTCTGACAATT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0104 | -113 | 4.7 | AATTTTCAGATTTTT |
| -39 | 4.5 | ATTATTCTAATTATT | ||
| Staphylococcus haemolyticus JCSC1435 | SH2541 | -138 | 5.4 | AATTTTCAGAAAATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP2285 | -118 | 5 | AAAATTCTGAAAATT |
|
Position: -90
Score: 5.2 Sequence: AATATTTAGAAAATT
Locus tag: SERP0195
|
||||
| SERP0195 | -90 | 5.2 | AATATTTAGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ilvE | ||||
| Ortholog function: branched-chain amino acid aminotransferase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0512 | -92 | 5.2 | AATTTTTAGAAAATT |
| Staphylococcus capitis SK14 | STACA0001_0476 | -101 | 4.4 | TTTATTTTGAATATT |
| -92 | 4.7 | AATATTTAGAAAACT | ||
| Staphylococcus epidermidis ATCC 12228 | SE0318 | -99 | 4.1 | TCTATTTTGAATATT |
| -90 | 5.2 | AATATTTAGAAAATT | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0215 | -101 | 4.5 | ATTTTTTTAAATTTT |
| -92 | 4.8 | AATTTTCTAAAAACT | ||
| Staphylococcus haemolyticus JCSC1435 | SH2449 | -91 | 5.2 | AATTTTTAGAAAATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP2163 | -86 | 5.2 | AATTTTTTGAAAATT |
| Macrococcus caseolyticus JCSC5402 | MCCL_1855 | -85 | 4.8 | AATTTTCTAAAAACT |
|
Position: -25
Score: 4.8 Sequence: AATTTTAAAAAAATT
Locus tag: SERP0234
|
||||
| SERP0234 | -25 | 4.8 | AATTTTAAAAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SE0357 | ||||
| Ortholog function: hypothetical protein | ||||
| Staphylococcus capitis SK14 | STACA0001_0445 | -33 | 4.4 | TAAATTCAAAATATT |
| -24 | 5 | AATATTTTAAAAATT | ||
| Staphylococcus epidermidis ATCC 12228 | SE0357 | -139 | 4.8 | AATTTTAAAAAAATT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0240 | -61 | 5 | AATTTTCAAAAAAAT |
| Staphylococcus haemolyticus JCSC1435 | SH2406 | -248 | 4.5 | AATTTTTTAACATTT |
|
Position: -206
Score: 5 Sequence: AAAATTCAGAATATT
Locus tag: SERP0305
|
||||
| SERP0305 | -206 | 5 | AAAATTCAGAATATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA0601 | ||||
| Ortholog function: hypothetical protein | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0601 | -400 | 5 | AAAATTCAGAATATT |
| -391 | 4.1 | AATATTTTTAATTAT | ||
| Staphylococcus capitis SK14 | STACA0001_0382 | -211 | 5 | AAAATTCAGAATATT |
| Staphylococcus epidermidis ATCC 12228 | SE0420 | -206 | 5 | AAAATTCAGAATATT |
| -197 | 4.1 | AATATTTAAATTTAT | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0294 | -120 | 4.8 | AATTTTCAGAATTAT |
| Staphylococcus haemolyticus JCSC1435 | SH2248 | -172 | 5 | AAAATTCAGAAAATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP2074 | -166 | 4.8 | AAATTTCAGAATTTT |
|
Position: -65
Score: 5.2 Sequence: AATTTTCTAAAAATT
Locus tag: SERP0489
|
||||
| SERP0489 | -65 | 5.2 | AATTTTCTAAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: metN | ||||
| Ortholog function: Methionine ABC transporter, ATP-binding protein | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0769 | -272 | 4.6 | ATTTGTTAGAAAATT |
| -263 | 4.2 | AAAATTTAAAATAGT | ||
| Staphylococcus capitis SK14 | STACA0001_0218 | -272 | 4.6 | ATTTGTTAGAAAATT |
| -263 | 4.4 | AAAATTTAAAATAAT | ||
| Staphylococcus epidermidis ATCC 12228 | SE0600 | -275 | 4.6 | ATTTGTTAGAAAATT |
| -266 | 4.4 | AAAATTTAAAATAAT | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0455 | -282 | 4.7 | ATTTATTAGAAAATT |
| -273 | 4.2 | AAAATTTAAAATAGT | ||
| Staphylococcus haemolyticus JCSC1435 | SH2047 | -261 | 4.1 | AAAAGTTAAAATAAT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1866 | -274 | 4.6 | ATTTGTTAGAAAATT |
| -265 | 4.4 | AAAATTTAAAATAAT | ||
|
Position: -180
Score: 4.5 Sequence: AATTTACAGAAATTT
Locus tag: SERP0549
|
||||
| SERP0549 | -180 | 4.5 | AATTTACAGAAATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: argG | ||||
| Ortholog function: argininosuccinate synthase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0822 | -32 | 4.6 | AATATTCAGATAACT |
| Staphylococcus capitis SK14 | STACA0001_0165 | -33 | 5 | AAAATTCTGAAAATT |
| Staphylococcus epidermidis ATCC 12228 | SE0657 | -180 | 4.5 | AATTTACAGAAATTT |
| -171 | 4.3 | AAATTTTAAAATATA | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0569 | -33 | 4.5 | AAAATTCTAACTATT |
| Staphylococcus haemolyticus JCSC1435 | SH1989 | -31 | 5.1 | AATTTTCAGAAAAAT |
|
Position: -63
Score: 4.9 Sequence: ATATTTCTGAAAATT
Locus tag: SERP0570
|
||||
| SERP0570 | -63 | 4.9 | ATATTTCTGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: oppB | ||||
| Ortholog function: oligopeptide ABC transporter permease protein OppB | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0845 | -66 | 4.7 | AGATTTCAGAAAATT |
| Staphylococcus capitis SK14 | STACA0001_0146 | -36 | 4.2 | AATATACATAATATT |
| -27 | 4.6 | AATATTCTGAAAAAA | ||
| Staphylococcus epidermidis ATCC 12228 | SE0680 | -63 | 4.9 | ATATTTCTGAAAATT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0588 | -113 | 5.2 | AATATTCTAAAAATT |
| -65 | 4.2 | AATATTAAAATATTT | ||
| -56 | 4.9 | ATATTTCTGAAAATT | ||
| Staphylococcus haemolyticus JCSC1435 | SH1970 | -116 | 4.7 | AATTTTGTGAAAATT |
| -60 | 4.9 | ATATTTCTGAAAATT | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1794 | -56 | 4.8 | ATATTTCTGAATATT |
| Macrococcus caseolyticus JCSC5402 | MCCL_0605 | -186 | 4.8 | AATTTTTAAAAAAAT |
| -132 | 4.8 | AATCTTCTGAAAATT | ||
|
Position: -82
Score: 4.7 Sequence: AAATGTCAGAATATT
Locus tag: SERP0617
|
||||
| SERP0617 | -82 | 4.7 | AAATGTCAGAATATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA0883 | ||||
| Ortholog function: hypothetical protein | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0883 | -77 | 4.9 | AATAGTCAGAATATT |
| Staphylococcus capitis SK14 | STACA0001_0107 | -83 | 4.7 | AAATGTCAGAATATT |
| Staphylococcus epidermidis ATCC 12228 | SE0729 | -82 | 4.7 | AAATGTCAGAATATT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0643 | -178 | 4.2 | AATTATAAAAATAAT |
| -91 | 4.1 | TATTTTTTAAAAAGT | ||
| -82 | 4.6 | AAAAGTCAGAATATT | ||
| Staphylococcus haemolyticus JCSC1435 | SH1925 | -80 | 4.6 | AAAAGTCAGAATATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1756 | -174 | 4.5 | AATTTTTATAAATTT |
| -80 | 4.6 | AAAAGTCTGAATATT | ||
|
Position: -147
Score: 4.7 Sequence: AATATTCTGACATTT
Locus tag: SERP0618
|
||||
| SERP0618 | -147 | 4.7 | AATATTCTGACATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: comK | ||||
| Ortholog function: competence transcription factor | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0882 | -147 | 4.9 | AATATTCTGACTATT |
| Staphylococcus capitis SK14 | STACA0001_0106 | -151 | 4.7 | AATATTCTGACATTT |
| Staphylococcus epidermidis ATCC 12228 | SE0731 | -147 | 4.7 | AATATTCTGACATTT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0642 | -145 | 4.6 | AATATTCTGACTTTT |
| -136 | 4.1 | ACTTTTTAAAAAATA | ||
| Staphylococcus haemolyticus JCSC1435 | SH1926 | -148 | 4.6 | AATATTCTGACTTTT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1755 | -186 | 4.6 | AATATTCAGACTTTT |
| -92 | 4.5 | AAATTTATAAAAATT | ||
| Macrococcus caseolyticus JCSC5402 | MCCL_1546 | -195 | 4.8 | ATAATTCTGAAAATT |
| -186 | 4.4 | AAAATTTAAATTATT | ||
| -86 | 4.7 | AAATTTCTTAAAATT | ||
|
Position: -59
Score: 4.1 Sequence: ACTATTTAAACAATT
Locus tag: SERP0633
|
||||
| SERP0633 | -59 | 4.1 | ACTATTTAAACAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: patA | ||||
| Ortholog function: putative aminotransferase A | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0902 | -50 | 4.2 | TAATTTCTAAATTTT |
| -41 | 4.4 | AATTTTTAGACAATA | ||
| Staphylococcus capitis SK14 | STACA0001_2317 | -58 | 4.1 | ACTATTTTAACAATT |
| Staphylococcus epidermidis ATCC 12228 | SE0747 | -59 | 4.1 | ACTATTTAAACAATT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0656 | -108 | 4.2 | TTTATTCTAAAATTT |
| Staphylococcus haemolyticus JCSC1435 | SH1916 | -65 | 4.9 | ATTATTCTAAAAATT |
| Macrococcus caseolyticus JCSC5402 | MCCL_1585 | -86 | 4.3 | AATGTTCTAATAATT |
|
Position: -43
Score: 4.9 Sequence: ATTATTTAGAAAATT
Locus tag: SERP0704
|
||||
| SERP0704 | -43 | 4.9 | ATTATTTAGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pycA | ||||
| Ortholog function: pyruvate carboxylase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0963 | -41 | 4.6 | ATTAGTTAGAAAATT |
| Staphylococcus capitis SK14 | STACA0001_2249 | -42 | 4.6 | ATTAGTTAGAAAATT |
| -33 | 4.4 | AAAATTCAAAAAATA | ||
| Staphylococcus epidermidis ATCC 12228 | SE0813 | -40 | 4.1 | TATTATCTAATTATT |
| -31 | 4.9 | ATTATTTAGAAAATT | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0740 | -34 | 4.6 | AAAATTCAAATAATT |
| Staphylococcus haemolyticus JCSC1435 | SH1838 | -41 | 4.5 | ATTAGTTAGAATATT |
| -32 | 4 | AATATTCAAACTTTA | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1675 | -38 | 4.7 | ACTTTTTAGAAAATT |
| -29 | 4.1 | AAAATTCAAAATTTA | ||
|
Position: -194
Score: 4.8 Sequence: AAATGTCTGAAAATT
Position: -185
Score: 4.7 Sequence: AAAATTTTAAAAATT
Position: -184
Score: 4.6 Sequence: AAATTTTAAAAATTT
Position: -183
Score: 4.5 Sequence: AATTTTAAAAATTTT
Locus tag: SERP0875
|
||||
| SERP0875 | -194 | 4.8 | AAATGTCTGAAAATT | |
| -185 | 4.7 | AAAATTTTAAAAATT | ||
| -184 | 4.6 | AAATTTTAAAAATTT | ||
| -183 | 4.5 | AATTTTAAAAATTTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glnR | ||||
| Ortholog function: HTH-type transcriptional regulator GlnR | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1149 | -187 | 4.4 | ATTTATCAGATTATT |
| -178 | 4.2 | ATTATTTTTAAAAAT | ||
| Staphylococcus capitis SK14 | STACA0001_1553 | -202 | 4.3 | TTTTGTCAGAAAATT |
| -191 | 4.1 | AATTATAAAATTATT | ||
| -150 | 4.2 | ATTAATTAAAAATTT | ||
| Staphylococcus epidermidis ATCC 12228 | SE0986 | -194 | 4.8 | AAATGTCTGAAAATT |
| -185 | 4.7 | AAAATTTTAAAAATT | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0958 | -157 | 4.8 | AATTTACAGAAAATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1452 | -179 | 4.2 | ATTTTTTTGAATAAA |
| -157 | 4.9 | AATTTTCTAATAATT | ||
| -56 | 4.4 | ATTAATCTGATTATT | ||
|
Position: -149
Score: 5 Sequence: AATATTCAGAATTTT
Locus tag: SERP0883
|
||||
| SERP0883 | -149 | 5 | AATATTCAGAATTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ltaE | ||||
| Ortholog function: low specificity L-threonine aldolase | ||||
| Staphylococcus capitis SK14 | STACA0001_1558 | -154 | 4.7 | AATATTCAGAATTAT |
| Staphylococcus epidermidis ATCC 12228 | SE0995 | -149 | 5 | AATATTCAGAAATTT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1514 | -101 | 5.3 | AATTTTCTGAATATT |
|
Position: -179
Score: 5 Sequence: AAAATTCTGAATATT
Locus tag: SERP0884
|
||||
| SERP0884 | -179 | 5 | AAAATTCTGAATATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SAS040 | ||||
| Ortholog function: hypothetical protein | ||||
| Staphylococcus capitis SK14 | STACA0001_1559 | -178 | 4.7 | ATAATTCTGAATATT |
| Staphylococcus epidermidis ATCC 12228 | SE0996 | -179 | 5 | AAATTTCTGAATATT |
| Staphylococcus haemolyticus JCSC1435 | SH1591 | -194 | 4.3 | AATAATTTAATTATT |
| -185 | 5.1 | ATTATTCTGAAAATT | ||
| -123 | 4.5 | AATATTTTAAATATA | ||
|
Position: -33
Score: 4.7 Sequence: AATTTTCTGATTTTT
Locus tag: SERP0896
|
||||
| SERP0896 | -33 | 4.7 | AATTTTCTGATTTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: thrA | ||||
| Ortholog function: aspartokinase III | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1163 | -87 | 4.6 | AATATTCAAAATATA |
| -35 | 4.7 | AATTTTCTGATTTTT | ||
| Staphylococcus capitis SK14 | STACA0001_1570 | -33 | 4.7 | AATTTTCTGATTTTT |
| Staphylococcus epidermidis ATCC 12228 | SE1008 | -33 | 4.7 | AATTTTCTGATTTTT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0969 | -97 | 4.4 | AAAGTTCAAAAAATT |
| -79 | 4.2 | AATATGTTGAAATTT | ||
| Staphylococcus haemolyticus JCSC1435 | SH1580 | -35 | 4.7 | AATTTTCTGATTTTT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1439 | -35 | 4.7 | AATTTTCTGATTTTT |
|
Position: -170
Score: 4.7 Sequence: AAAAATCAGAAAATT
Locus tag: SERP0897
|
||||
| SERP0897 | -170 | 4.7 | AAAAATCAGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hom | ||||
| Ortholog function: homoserine dehydrogenase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1164 | -170 | 4.7 | AAAAATCAGAAAATT |
| -118 | 4.6 | TATATTTTGAATATT | ||
| Staphylococcus capitis SK14 | STACA0001_1571 | -170 | 4.7 | AAAAATCAGAAAATT |
| -91 | 4.3 | AAAATTAAGAATAAT | ||
| Staphylococcus epidermidis ATCC 12228 | SE1009 | -170 | 4.7 | AAAAATCAGAAAATT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0970 | -127 | 4.2 | AAATTTCAACATATT |
| -109 | 4.4 | AATTTTTTGAACTTT | ||
| Staphylococcus haemolyticus JCSC1435 | SH1579 | -178 | 4.7 | AAAAATCAGAAAATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1438 | -168 | 4.7 | AAAAATCAGAAAATT |
|
Position: -112
Score: 4.6 Sequence: AAATATCAGAAAAAT
Locus tag: SERP0902
|
||||
| SERP0902 | -112 | 4.6 | AAATATCAGAAAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rocC | ||||
| Ortholog function: amino acid permease | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1169 | -110 | 4.7 | AAAAATCAGAAAATT |
| -101 | 4.1 | AAAATTTTAATTTTT | ||
| Staphylococcus capitis SK14 | STACA0001_1576 | -112 | 5.1 | AAATTTCAGAAAATT |
| -102 | 4.7 | AAATTTTTAAATATT | ||
| Staphylococcus epidermidis ATCC 12228 | SE1015 | -112 | 4.6 | AAATATCAGAAAAAT |
| -103 | 4.1 | AAAAATTTAACAATT | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0975 | -121 | 4.3 | TTTTTTCAGAATTTT |
| -112 | 4.7 | AATTTTTTAAATTTT | ||
| Staphylococcus haemolyticus JCSC1435 | SH1574 | -114 | 5.1 | AAATTTCAGAAAATT |
| -105 | 4.4 | AAAATTTAAAATTTT | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1433 | -111 | 4.4 | AATATTTAAACATTT |
| Macrococcus caseolyticus JCSC5402 | MCCL_0990 | -56 | 4.4 | AATTTTCTTAATTAT |
|
Position: -142
Score: 4.1 Sequence: AATTGTTAAATTTTT
Position: -133
Score: 4.6 Sequence: ATTTTTCTGATATTT
Locus tag: SERP0903
|
||||
| SERP0903 | -142 | 4.1 | AATTGTTAAATTTTT | |
| -133 | 4.6 | ATTTTTCTGATATTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: katA | ||||
| Ortholog function: catalase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1170 | -111 | 4.1 | AAAAATTAAAATTTT |
| -102 | 4.7 | AATTTTCTGATTTTT | ||
| Staphylococcus capitis SK14 | STACA0001_1577 | -131 | 4.7 | AATATTTAAAAATTT |
| -121 | 5.1 | AATTTTCTGAAATTT | ||
| Staphylococcus epidermidis ATCC 12228 | SE1016 | -142 | 4.1 | AATTGTTAAATTTTT |
| -133 | 4.6 | ATTTTTCTGATATTT | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_2336 | -28 | 4.1 | ATTATTCTAAATAAG |
| Staphylococcus haemolyticus JCSC1435 | SH1573 | -123 | 4.4 | AAAATTTTAAATTTT |
| -114 | 5.1 | AATTTTCTGAAATTT | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1432 | -129 | 4.4 | AAATGTTTAAATATT |
|
Position: -242
Score: 4.6 Sequence: ATTTTTCTAATTATT
Locus tag: SERP0936
|
||||
| SERP0936 | -242 | 4.6 | ATTTTTCTAATTATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: tyrA | ||||
| Ortholog function: prephenate dehydrogenase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1197 | -34 | 5.1 | ATTATTCTGAAAATT |
| Staphylococcus capitis SK14 | STACA0001_1611 | -35 | 4.8 | ACTATTCTGAAAATT |
| Staphylococcus epidermidis ATCC 12228 | SE1047 | -251 | 4.4 | AATTATCTGATTTTT |
| -242 | 4.6 | ATTTTTCTAATTATT | ||
| -35 | 4.4 | GTTATTCTGAAAATT | ||
| Staphylococcus haemolyticus JCSC1435 | SH1544 | -35 | 4.8 | CATATTCTGAAAATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1387 | -36 | 4.8 | ACTATTCTGAAAATT |
|
Position: 36
Score: 4.2 Sequence: GATATTAAGAAAATT
Locus tag: SERP0941
|
||||
| SERP0941 | 36 | 4.2 | GATATTAAGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: trpF | ||||
| Ortholog function: phosphoriborylanthranilate isomerase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1203 | -439 | 4.5 | AATAATTAGAATTTT |
| Staphylococcus capitis SK14 | STACA0001_1617 | -438 | 4.6 | AATAATTAGAAAAAT |
| -429 | 4.4 | AAAAATCAGATAATT | ||
| Staphylococcus epidermidis ATCC 12228 | SE1052 | -431 | 4.6 | AATAATTAGAAAAAT |
| -422 | 4.4 | AAAAATCAGATAATT | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1016 | -464 | 4.3 | CATTATTAAAAAATT |
| Staphylococcus haemolyticus JCSC1435 | SH1538 | -453 | 4.3 | AAATATCAAACAATT |
|
Position: -348
Score: 4.7 Sequence: AATTTTCAGTATATT
Position: -339
Score: 4 Sequence: TATATTTTTAAAAAT
Position: -330
Score: 4.1 Sequence: AAAAATCTAAAATAT
Position: -329
Score: 4 Sequence: AAAATCTAAAATATT
Position: -233
Score: 4 Sequence: AAACTTTAGATAATT
Locus tag: SERP0963
|
||||
| SERP0963 | -348 | 4.7 | AATTTTCAGTATATT | |
| -339 | 4 | TATATTTTTAAAAAT | ||
| -330 | 4.1 | AAAAATCTAAAATAT | ||
| -329 | 4 | AAAATCTAAAATATT | ||
| -233 | 4 | AAACTTTAGATAATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lysC | ||||
| Ortholog function: aspartokinase II | ||||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1037 | -340 | 4.3 | AAATTTCTAAAAATC |
| Staphylococcus haemolyticus JCSC1435 | SH1518 | -344 | 4.1 | ATTTTTCAGTCTATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1357 | -350 | 4.5 | ATTTTTCAGTAAATT |
| -341 | 4.3 | TAAATTTAAAAAATT | ||
|
Position: -46
Score: 5.2 Sequence: AATTTTCTAAAAATT
Locus tag: SERP0964
|
||||
| SERP0964 | -46 | 5.2 | AATTTTCTAAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: asd | ||||
| Ortholog function: aspartate semialdehyde dehydrogenase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1226 | -45 | 5.2 | AATATTCTAAAAATT |
| Staphylococcus capitis SK14 | STACA0001_1640 | -44 | 5 | AATTTTCTTAAAATT |
| Staphylococcus epidermidis ATCC 12228 | SE1074 | -46 | 5.2 | AATTTTCTAAAAATT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1038 | -340 | 4.3 | AAATTTCTAAAAATC |
| Staphylococcus haemolyticus JCSC1435 | SH1517 | -42 | 4.8 | AATTTTTTTAAAATT |
| -33 | 4.3 | AAAATTCAAACAAAT | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1356 | -350 | 4.5 | ATTTTTCAGTAAATT |
| -341 | 4.3 | TAAATTTAAAAAATT | ||
|
Position: -87
Score: 5.1 Sequence: AATTTTCTGAAATTT
Locus tag: SERP0977
|
||||
| SERP0977 | -87 | 5.1 | AATTTTCTGAAATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: braB | ||||
| Ortholog function: branched-chain amino acid transport system | ||||
| Staphylococcus capitis SK14 | STACA0001_1652 | -85 | 4.7 | AATTTTCTGAAATTA |
| Staphylococcus epidermidis ATCC 12228 | SE1090 | -87 | 5.1 | AATTTTCTGAAATTT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1051 | -96 | 4.7 | AATTTTCAGAAAGTT |
| Staphylococcus haemolyticus JCSC1435 | SH1502 | -87 | 4.2 | AATTTTCTGAAATCA |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1343 | -95 | 4.5 | ATATTTTTAAATATT |
| -86 | 5 | AATATTCTGAAATTT | ||
| Macrococcus caseolyticus JCSC5402 | MCCL_1059 | -84 | 4.9 | AATATTCAGAAAATA |
|
Position: -138
Score: 4 Sequence: TCTTTTTTAAATATT
Locus tag: SERP1036
|
||||
| SERP1036 | -138 | 4 | TCTTTTTTAAATATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aroC | ||||
| Ortholog function: chorismate synthase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1299 | -150 | 4.6 | AATATTAAGATAATT |
| -141 | 4.2 | ATAATTCTGACATTT | ||
| Staphylococcus epidermidis ATCC 12228 | SE1155 | -138 | 4 | TCTTTTTTAAATATT |
| Staphylococcus haemolyticus JCSC1435 | SH1446 | -124 | 4.7 | AATTATTAAAATATT |
| -115 | 4.6 | AATATTCTAATAAAT | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1278 | -113 | 4.6 | ATTTTTATGAATATT |
|
Position: -108
Score: 4.6 Sequence: ATTTATCAAAATATT
Position: 15
Score: 4.3 Sequence: AATTTTATAAATACT
Locus tag: SERP1097
|
||||
| SERP1097 | -108 | 4.6 | ATTTATCAAAATATT | |
| 15 | 4.3 | AATTTTATAAATACT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA1363 | ||||
| Ortholog function: Lipoate-protein ligase A | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1363 | -106 | 4.8 | AATTATCAAAATATT |
| Staphylococcus capitis SK14 | STACA0001_1770 | -109 | 4.6 | ATTTATCAAAATATT |
| Staphylococcus epidermidis ATCC 12228 | SE1217 | -108 | 4.6 | ATTTATCAAAATATT |
| Staphylococcus haemolyticus JCSC1435 | SH1383 | -100 | 4.3 | ATTTATCAAAATTTT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1222 | -121 | 4.6 | ATTTATCAAAATATT |
|
Position: -66
Score: 4.6 Sequence: AATATTTTGATAAAT
Locus tag: SERP1098
|
||||
| SERP1098 | -66 | 4.6 | AATATTTTGATAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA1364 | ||||
| Ortholog function: putative sulfurtransferase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1364 | -66 | 4.8 | AATATTTTGATAATT |
| Staphylococcus capitis SK14 | STACA0001_1771 | -66 | 4.6 | AATATTTTGATAAAT |
| Staphylococcus epidermidis ATCC 12228 | SE1218 | -66 | 4.6 | AATATTTTGATAAAT |
| Staphylococcus haemolyticus JCSC1435 | SH1382 | -66 | 4.3 | AAAATTTTGATAAAT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1221 | -67 | 4.6 | AATATTTTGATAAAT |
|
Position: -54
Score: 5 Sequence: AATATTCAGAATTTT
Locus tag: SERP1287
|
||||
| SERP1287 | -54 | 5 | AATATTCAGAATTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA1544 | ||||
| Ortholog function: putative phosphoserine transaminase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1544 | -54 | 5.4 | AATTTTCAGAAAATT |
| Staphylococcus capitis SK14 | STACA0001_0615 | -53 | 5.2 | AATATTCAGAATATT |
| Staphylococcus epidermidis ATCC 12228 | SE1400 | -54 | 5 | AATATTCAGAATTTT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1329 | -55 | 4.9 | TATTTTCAGAATATT |
| Staphylococcus haemolyticus JCSC1435 | SH1201 | -55 | 5 | AATTATCAGAATATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1040 | -55 | 4.9 | TATTTTCTGAAAATT |
|
Position: -330
Score: 5.2 Sequence: AATTTTTAGAAAATT
Position: -264
Score: 4.4 Sequence: AATTTTAAAACAATT
Position: -33
Score: 4.5 Sequence: TATTTTCTAAATAAT
Locus tag: SERP1665
|
||||
| SERP1665 | -330 | 5.2 | AATTTTTAGAAAATT | |
| -264 | 4.4 | AATTTTAAAACAATT | ||
| -33 | 4.5 | TATTTTCTAAATAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ilvD | ||||
| Ortholog function: dihydroxy-acid dehydratase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1858 | -301 | 4.9 | AATTTTTAGACAATT |
| -53 | 4.5 | ATATTTCAGAATTTT | ||
| Staphylococcus capitis SK14 | STACA0001_0526 | -327 | 4.9 | AATTGTTAGAAAATT |
| Staphylococcus epidermidis ATCC 12228 | SE1654 | -330 | 5.2 | AATTTTTAGAAAATT |
| -321 | 4.1 | AAAATTCTAAATTTA | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1559 | -316 | 4.8 | AATTTTAAAAAAATT |
| -307 | 4.3 | AAAATTCTAATAAAT | ||
| Staphylococcus haemolyticus JCSC1435 | SH0980 | -321 | 4.4 | AGTTGTTAGAAAATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0825 | -323 | 4.2 | AATTGACAGAAAAAT |
| -266 | 4 | ATTTATCAAATTTTT | ||
| -258 | 4.7 | AATTTTTAGATATTT | ||
| -249 | 4.1 | ATATTTCAAACAAAT | ||
| Macrococcus caseolyticus JCSC5402 | MCCL_0860 | -266 | 5.2 | AATTTTTAGAAAATT |
| -257 | 4.7 | AAAATTTTAAATATT | ||
|
Position: -50
Score: 4.9 Sequence: ATTATTTTGAAAATT
Locus tag: SERP1668
|
||||
| SERP1668 | -50 | 4.9 | ATTATTTTGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ilvC | ||||
| Ortholog function: alpha-keto-beta-hydroxylacil reductoisomerase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1861 | -301 | 4.9 | AATTTTTAGACAATT |
| -53 | 4.5 | ATATTTCAGAATTTT | ||
| Staphylococcus capitis SK14 | STACA0001_0523 | -49 | 5.2 | AATATTTTGAAAATT |
| -40 | 4.3 | AAAATTAAGAATTTT | ||
| Staphylococcus epidermidis ATCC 12228 | SE1657 | -50 | 4.9 | ATTATTTTGAAAATT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1562 | -52 | 4.8 | AAAATTCTAAATATT |
| Staphylococcus haemolyticus JCSC1435 | SH0977 | -54 | 4.9 | AATTTTAAGAATATT |
| -45 | 5.1 | AATATTCTAAATATT | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0822 | -323 | 4.2 | AATTGACAGAAAAAT |
| -266 | 4 | ATTTATCAAATTTTT | ||
| -258 | 4.7 | AATTTTTAGATATTT | ||
| -249 | 4.1 | ATATTTCAAACAAAT | ||
| Macrococcus caseolyticus JCSC5402 | MCCL_0858 | -266 | 5.2 | AATTTTTAGAAAATT |
| -257 | 4.7 | AAAATTTTAAATATT | ||
|
Position: -113
Score: 4.6 Sequence: AATTGTAAGAAAATT
Position: -102
Score: 4.2 Sequence: AATTGTGTAAAAATT
Locus tag: SERP1740
|
||||
| SERP1740 | -113 | 4.6 | AATTGTAAGAAAATT | |
| -102 | 4.2 | AATTGTGTAAAAATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hmrA | ||||
| Ortholog function: N-acyl-L-amino acid amidohydrolase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA1935 | -143 | 4.5 | AGTTATTAGAAAATT |
| Staphylococcus capitis SK14 | STACA0001_0837 | -235 | 4.6 | AATTGTAAGAAAATT |
| Staphylococcus epidermidis ATCC 12228 | SE1731 | -113 | 4.6 | AATTGTAAGAAAATT |
| -102 | 4.2 | AATTGTGTAAAAATT | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1636 | -176 | 4.1 | AATTTATTAAATTTT |
| Staphylococcus haemolyticus JCSC1435 | SH0902 | -179 | 4.7 | AATTTTCAAAATTAT |
| -52 | 4.5 | AATATCCAAAATATT | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0752 | -190 | 4.1 | TATTTTTATAAATTT |
| -181 | 4.6 | AAATTTCAGAAAATG | ||
|
Position: -98
Score: 4.4 Sequence: AATTGTAAAAATATT
Locus tag: SERP1902
|
||||
| SERP1902 | -98 | 4.4 | AATTGTAAAAATATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA2109 | ||||
| Ortholog function: probable amino-acid or metabolite transporter | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2109 | -183 | 4.7 | ATTTTTTAGAAAAAT |
| Staphylococcus capitis SK14 | STACA0001_1171 | -181 | 5.1 | AATTTTCAGAAAAAT |
| -101 | 4.1 | AATTGTAAAAATTTT | ||
| Staphylococcus epidermidis ATCC 12228 | SE1892 | -98 | 4.4 | AATTGTAAAAATATT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1812 | -468 | 4.4 | ATTATACTGAAAATT |
| -414 | 4.4 | AATATTCAAATAATA | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0591 | -88 | 4.4 | AATTGTTTAAATTTT |
| -79 | 4.4 | AATTTTTTGAATTTA | ||
|
Position: -294
Score: 4.7 Sequence: AATATTTAAAATAAT
Locus tag: SERP1914
|
||||
| SERP1914 | -294 | 4.7 | AATATTTAAAATAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: metT | ||||
| Ortholog function: methionine transporter MetT | ||||
| Staphylococcus epidermidis ATCC 12228 | SE1902 | -303 | 4.2 | TATTATTAAAATATT |
| -294 | 4.7 | AATATTTAAAATAAT | ||
| Staphylococcus haemolyticus JCSC1435 | SH0729 | -189 | 5 | AATTTTCATAAAATT |
|
Position: -93
Score: 4.9 Sequence: ATATTTCTGAAAATT
Locus tag: SERP2017
|
||||
| SERP2017 | -93 | 4.9 | ATATTTCTGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aapA | ||||
| Ortholog function: D-serine/D-alanine/glycine transporter | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2226 | -108 | 4.3 | TATATTTAAAAAAAT |
| Staphylococcus aureus subsp. aureus N315 | SA2227 | -108 | 4.3 | TATATTTAAAAAAAT |
| Staphylococcus capitis SK14 | STACA0001_1050 | -166 | 4.8 | AATTTTTTGATTATT |
| -157 | 4.7 | ATTATTCTAAAAAAT | ||
| Staphylococcus epidermidis ATCC 12228 | SE2004 | -93 | 4.9 | ATATTTCTGAAAATT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1918 | -126 | 4.6 | AATTTTCTTATAATT |
| Staphylococcus haemolyticus JCSC1435 | SH0623 | -231 | 5.1 | AATTTTCAGAAATTT |
|
Position: -246
Score: 5.2 Sequence: AATTTTCTAAAAATT
Locus tag: SERP2023
|
||||
| SERP2023 | -246 | 5.2 | AATTTTCTAAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA2233 | ||||
| Ortholog function: integral membrane efflux protein | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2233 | -85 | 4.7 | AATTTTCTGCAAATT |
| Staphylococcus capitis SK14 | STACA0001_1042 | -252 | 5.2 | AATTTTCTAAAAATT |
| Staphylococcus epidermidis ATCC 12228 | SE2010 | -246 | 5.2 | AATTTTCTAAAAATT |
|
Position: -343
Score: 4.7 Sequence: AATATTATAAAAATT
Position: -249
Score: 4.5 Sequence: AAAATTATAAAAATT
Position: -80
Score: 4.1 Sequence: ATTTGTTTAACAATT
Locus tag: SERP2031
|
||||
| SERP2031 | -343 | 4.7 | AATATTATAAAAATT | |
| -249 | 4.5 | AAAATTATAAAAATT | ||
| -80 | 4.1 | ATTTGTTTAACAATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: opuCA | ||||
| Ortholog function: glycine betaine/carnitine/choline ABC transporter opuCA | ||||
| Staphylococcus capitis SK14 | STACA0001_1036 | -145 | 4.3 | CATATTCAAAATTTT |
| Staphylococcus epidermidis ATCC 12228 | SE2018 | -80 | 4.1 | ATTTGTTTAACAATT |
| Staphylococcus haemolyticus JCSC1435 | SH0606 | -134 | 4.1 | ATTAATTAAAATTTT |
|
Position: -218
Score: 4.6 Sequence: ATTTTTCTGAAATAT
Locus tag: SERP2045
|
||||
| SERP2045 | -218 | 4.6 | ATTTTTCTGAAATAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA2260 | ||||
| Ortholog function: putative short chain dehydrogenase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2260 | -174 | 4.9 | AATTTTCAGAAAATG |
| Staphylococcus capitis SK14 | STACA0001_1022 | -218 | 5.1 | AATTTTCTGAAATTT |
| Staphylococcus epidermidis ATCC 12228 | SE2032 | -218 | 4.6 | ATTTTTCTGAAATAT |
| Staphylococcus haemolyticus JCSC1435 | SH0590 | -209 | 5.1 | AATTTTCAGAAATTT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0436 | -165 | 4.9 | AATATTCTGAAAATA |
|
Position: -139
Score: 4.4 Sequence: ATAATTTAGAAATTT
Locus tag: SERP2087
|
||||
| SERP2087 | -139 | 4.4 | ATAATTTAGAAATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ddh2 | ||||
| Ortholog function: D-lactate dehydrogenase | ||||
| Macrococcus caseolyticus JCSC5402 | MCCL_0071 | -120 | 4.1 | ATTAATTTAAATAAT |
| -111 | 4.5 | AATAATCAAACAATT | ||
|
Position: -76
Score: 4.4 Sequence: TTATTTCAGAAAATT
Position: -67
Score: 4.5 Sequence: AAAATTCTAACTATT
Locus tag: SERP2134
|
||||
| SERP2134 | -76 | 4.4 | TTATTTCAGAAAATT | |
| -67 | 4.5 | AAAATTCTAACTATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mtnE | ||||
| Ortholog function: transaminase MtnE involved in methionine biosynthesis via salvage pathway | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2347 | -205 | 4.8 | ATTAATCTGAAAATT |
| Staphylococcus capitis SK14 | STACA0001_0934 | -212 | 4.2 | AAATGTTTGAAAATA |
| -93 | 4.6 | ACTTATCTGAAAATT | ||
| Staphylococcus epidermidis ATCC 12228 | SE2122 | -61 | 4.4 | TTATTTCAGAAAATT |
| -52 | 4.5 | AAAATTCTAACTATT | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0010 | -257 | 4.4 | AAATGTCAGAATTTT |
| Staphylococcus haemolyticus JCSC1435 | SH0492 | -253 | 4.5 | ATAAATCTGAAAATT |
| -244 | 4.4 | AAAATTATAAATATT | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0294 | -203 | 4.3 | AATATTCTGATAAAA |
| Macrococcus caseolyticus JCSC5402 | MCCL_0180 | -222 | 4.8 | AATATTCTGAATACT |
|
Position: -172
Score: 5.1 Sequence: AATTTTCAGAAAAAT
Locus tag: SERP2141
|
||||
| SERP2141 | -172 | 5.1 | AATTTTCAGAAAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA2357 | ||||
| Ortholog function: putative regulatory protein | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2357 | -188 | 4.2 | CTTTATCTAAAAATT |
| -179 | 4.7 | AAAATTCAGAATTTT | ||
| Staphylococcus capitis SK14 | STACA0001_0926 | -184 | 4.6 | AATTATCTAAATTTT |
| -175 | 4.4 | AATTTTCTGAAAACG | ||
| Staphylococcus epidermidis ATCC 12228 | SE2129 | -172 | 5.1 | AATTTTCAGAAAAAT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_2043 | -282 | 4.7 | CATATTTTGAAAATT |
| -69 | 4.5 | TATTATCAGAATATT | ||
| Staphylococcus haemolyticus JCSC1435 | SH0484 | -156 | 5.3 | AATATTCTGAAAATT |
| -147 | 4.1 | AAAATTTAGAATTTG | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0292 | -65 | 5.3 | AATATTCTGAAAATT |
| -56 | 4.2 | AAAATTAAGAAAATA | ||
|
Position: -165
Score: 4.8 Sequence: ATTTTTCAGAATTTT
Locus tag: SERP2158
|
||||
| SERP2158 | -165 | 4.8 | ATTTTTCAGAATTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA2396 | ||||
| Ortholog function: putative amino acid transporter | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2396 | -226 | 4.9 | AATTGTTAGAAAATT |
| -103 | 4.8 | ATTTTTCAGAATTTT | ||
| -94 | 4.2 | AATTTTTAGACAAAA | ||
| Staphylococcus capitis SK14 | STACA0001_0893 | -295 | 4.3 | AATTTGTAAAATATT |
| -160 | 4.8 | ATTTTTCAGAATTTT | ||
| -151 | 4.2 | AATTTTTAGACAAAA | ||
| Staphylococcus epidermidis ATCC 12228 | SE2147 | -165 | 4.8 | ATTTTTCAGAATTTT |
| -156 | 4.2 | AATTTTTAGACAAAA | ||
| Staphylococcus haemolyticus JCSC1435 | SH0460 | -114 | 5.1 | AATTTTCAGAAATTT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0274 | -98 | 5.3 | AATTTTCTGAATATT |
| -89 | 4.3 | AATATTTAGATATAT | ||
|
Position: -156
Score: 4.6 Sequence: AATTATCAGAAAATA
Locus tag: SERP2159
|
||||
| SERP2159 | -156 | 4.6 | AATTATCAGAAAATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gabT | ||||
| Ortholog function: 4-aminobutyrate aminotransferase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2397 | -136 | 4 | AAAATTCTTAATTAT |
| -127 | 4.5 | AATTATCAGAATATA | ||
| Staphylococcus capitis SK14 | STACA0001_0892 | -175 | 4.7 | AATATTTTAATAATT |
| -166 | 4.3 | ATAATTCAGAAAATA | ||
| Staphylococcus epidermidis ATCC 12228 | SE2148 | -164 | 4.6 | AATATTCTAAATTAT |
| -155 | 4.6 | AATTATCAGAAAATA | ||
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0283 | -127 | 4.8 | AAATATCTGAAAATT |
| Staphylococcus haemolyticus JCSC1435 | SH0459 | -145 | 4.6 | ATTATTCAGAAAATA |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0353 | -218 | 4.6 | ATTTTTCAGAATATA |
|
Position: -125
Score: 4.6 Sequence: TATTTTCTGATAATT
Locus tag: SERP2160
|
||||
| SERP2160 | -125 | 4.6 | TATTTTCTGATAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SA2398 | ||||
| Ortholog function: hypothetical protein | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2398 | -109 | 4.5 | TATATTCTGATAATT |
| -100 | 4 | ATAATTAAGAATTTT | ||
| Staphylococcus capitis SK14 | STACA0001_0891 | -131 | 4.3 | TATTTTCTGAATTAT |
| -122 | 4.7 | AATTATTAAAATATT | ||
| Staphylococcus epidermidis ATCC 12228 | SE2150 | -125 | 4.6 | TATTTTCTGATAATT |
| -116 | 4.6 | ATAATTTAGAATATT | ||
| Staphylococcus haemolyticus JCSC1435 | SH0457 | -89 | 5 | AATTTTTAAAATATT |
| -80 | 4.8 | AATATTCTAAATTTT | ||
|
Position: -69
Score: 4.7 Sequence: ATTATTCTGACAATT
Locus tag: SERP2192
|
||||
| SERP2192 | -69 | 4.7 | ATTATTCTGACAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cysH | ||||
| Ortholog function: 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase | ||||
| Staphylococcus capitis SK14 | STACA0001_1812 | -72 | 4.7 | ATTATTCTGACAATT |
| Staphylococcus epidermidis ATCC 12228 | SE2181 | -69 | 4.7 | ATTATTCTGACAATT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0058 | -80 | 4.6 | TATTTTCAGACAATT |
| Staphylococcus haemolyticus JCSC1435 | SH0413 | -69 | 4.7 | ATTATTCTGACAATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP2409 | -80 | 4.5 | TATTTTCAAATAATT |
|
Position: -69
Score: 4.9 Sequence: ACTTTTCAGAAAATT
Locus tag: SERP2252
|
||||
| SERP2252 | -69 | 4.9 | ACTTTTCAGAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aur | ||||
| Ortholog function: zinc metalloproteinase aureolysin | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2430 | -68 | 4.6 | ACTTTTCTGAAAAAT |
| Staphylococcus capitis SK14 | STACA0001_1850 | -30 | 4.2 | CTTTTTCAAAAATTT |
| 7 | 4.4 | ATTTTTCAAAATATG | ||
| Staphylococcus epidermidis ATCC 12228 | SE2219 | -69 | 4.9 | ACTTTTCAGAAAATT |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP1542 | -104 | 4.3 | ATAATTCAAAATAAT |
|
Position: -124
Score: 4.7 Sequence: ATTATTTAGAAAAAT
Locus tag: SERP2282
|
||||
| SERP2282 | -124 | 4.7 | ATTATTTAGAAAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: capH | ||||
| Ortholog function: capsular polysaccharide synthesis enzyme Cap5H | ||||
| Staphylococcus haemolyticus JCSC1435 | SH0395 | -367 | 4.6 | TATATTTAAAAAATT |
|
Position: -142
Score: 4.8 Sequence: AATTTTCTAAAAATA
Locus tag: SERP2293
|
||||
| SERP2293 | -142 | 4.8 | AATTTTCTAAAAATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: icaA | ||||
| Ortholog function: intercellular adhesion protein A | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2459 | 4 | 4.4 | AATTTTTTAACTTTT |
| Staphylococcus capitis SK14 | STACA0001_0088 | 4 | 4.4 | AATTTTTTAACTTTT |
|
Position: -115
Score: 5.1 Sequence: AATTTTCTGAAAAAT
Locus tag: SERP2307
|
||||
| SERP2307 | -115 | 5.1 | AATTTTCTGAAAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hisZ | ||||
| Ortholog function: ATP phosphoribosyltransferase regulatory subunit | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2472 | -142 | 4.6 | AATTTTCTGAAAAAG |
| Staphylococcus epidermidis ATCC 12228 | SE0270 | -115 | 5.1 | AATTTTCTGAAAAAT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_0637 | -125 | 4.2 | ATTTTTATTAATATT |
| -116 | 5 | AATATTCAGAATTTT | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0431 | -109 | 4.8 | CATTTTCAGAATATT |
|
Position: 22
Score: 4 Sequence: ATTTATCTAAAACTT
Locus tag: SERP2354
|
||||
| SERP2354 | 22 | 4 | ATTTATCTAAAACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SE0226 | ||||
| Ortholog function: putative esterase | ||||
| Staphylococcus epidermidis ATCC 12228 | SE0226 | -43 | 4 | TATTTTTTAACAAAT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1930 | -517 | 4.7 | ATTTGTCTGAATATT |
|
Position: 6
Score: 4 Sequence: AATTATAAAAAATAT
Locus tag: SERP2356
|
||||
| SERP2356 | 6 | 4 | AATTATAAAAAATAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: opuCC | ||||
| Ortholog function: glycine betaine/carnitine/choline ABC transporter opuCC | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2235 | -76 | 4.1 | ATTTGTTTAACAATT |
| Staphylococcus epidermidis ATCC 12228 | SE0224 | -43 | 4 | TATTTTTTAACAAAT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1932 | -517 | 4.7 | ATTTGTCTGAATATT |
|
Position: -43
Score: 4 Sequence: TATTTTTTAACAAAT
Position: -42
Score: 4.2 Sequence: ATTTTTTAACAAATT
Locus tag: SERP2358
|
||||
| SERP2358 | -43 | 4 | TATTTTTTAACAAAT | |
| -42 | 4.2 | ATTTTTTAACAAATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: opuCA | ||||
| Ortholog function: glycine betaine/carnitine/choline ABC transporter opuCA | ||||
| Staphylococcus aureus subsp. aureus N315 | SA2237 | -76 | 4.1 | ATTTGTTTAACAATT |
| Staphylococcus epidermidis ATCC 12228 | SE0222 | -43 | 4 | TATTTTTTAACAAAT |
| Staphylococcus carnosus subsp. carnosus TM300 | Sca_1934 | -517 | 4.7 | ATTTGTCTGAATATT |
|
Position: -173
Score: 4.4 Sequence: AATATTAAAAATTTT
Locus tag: SERP2363
|
||||
| SERP2363 | -173 | 4.4 | AATATTAAAAATTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: brnQ1 | ||||
| Ortholog function: branched-chain amino acid transport system | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0180 | -117 | 5.2 | AATTTTCAAAAAATT |
| Staphylococcus capitis SK14 | STACA0001_0024 | -81 | 4.7 | TTTTTTCTGAAAATT |
| Staphylococcus epidermidis ATCC 12228 | SE0217 | -173 | 4.4 | AATATTAAAAATTTT |
| Staphylococcus haemolyticus JCSC1435 | SH0145 | -81 | 4.5 | AATTTATTGAATATT |
| Macrococcus caseolyticus JCSC5402 | MCCL_0050 | -86 | 4.5 | AATTTTTTAATTAAT |
| -77 | 4.8 | ATTAATCAGAAAATT | ||
|
Position: -233
Score: 4.8 Sequence: AATAATTAGAAAATT
Position: -224
Score: 4.5 Sequence: AAAATTTAGACTATT
Locus tag: SERP2541
|
||||
| SERP2541 | -233 | 4.8 | AATAATTAGAAAATT | |
| -224 | 4.5 | AAAATTTAGACTATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: metX | ||||
| Ortholog function: homoserine-o-acetyltransferase | ||||
| Staphylococcus aureus subsp. aureus N315 | SA0011 | -293 | 4.6 | AGTAATCAGAAAATT |
| Staphylococcus capitis SK14 | STACA0001_1363 | -236 | 4.6 | ATTAATTAGAAAATT |
| -227 | 4.6 | AAAATTCAGACTATT | ||
| Staphylococcus epidermidis ATCC 12228 | SE0011 | -233 | 4.8 | AATAATTAGAAAATT |
| -224 | 4.5 | AAAATTTAGACTATT | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | SSP0012 | -230 | 4.8 | AATAATTAGAAAATT |
| -221 | 4 | AAAATTATGATATTT | ||