Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of SO2282 regulog to Shewanella baltica OS155

Reference regulog properties
Source regulog: SO2282 - Shewanellaceae
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode: repressor
Biological process: Amino acid efflux
Effector:
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Shewanella baltica OS155
Orthologous TF(s) Sbal_2383
Regulated genes 1
Built upon 23 sites [see more]
Predicted regulatory interactions in Shewanella baltica OS155
Locus tag Position Score Sequence
Position: 7
Score: 6.6
Sequence: TAAATGTATGCATACAATTT
Locus tag: Sbal_2382
Sbal_2382 7 6.6 TAAATGTATGCATACAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO2285
Ortholog function: amino acid efflux protein, RhtB family
Shewanella putrefaciens CN-32 Sputcn32_2133 -29 6.3 ACAATGTATGCATACAATTA
Shewanella sp W3-18-1 Sputw3181_1878 -29 6.3 ACAATGTATGCATACAATTA
Shewanella sp ANA-3 Shewana3_2265 -29 6.6 ATATTGTATGCGTACAATTT
Shewanella sp MR-4 Shewmr4_1754 -29 6.6 ATATTGTATGCGTACAATTT
Shewanella sp MR-7 Shewmr7_1834 -29 6.6 ATATTGTATGCGTACAATTT
Shewanella baltica OS155 Sbal_2382 8 6.6 tAAaTGTATGCATACAATTT
Shewanella amazonensis SB2B Sama_2015 -32 6.4 TTATTGTATCCATACAATTT
Shewanella pealeana ATCC 700345 Spea_2526 -98 6 GTATTGTACTCATACAATTC
Shewanella halifaxensis HAW-EB4 Shal_1727 -95 5.7 TTTTTGTATGCATACAATTG
Shewanella piezotolerans WP3 swp_1879 -146 6.4 TAATTGTATGCGTACAATAA
Shewanella woodyi ATCC 51908 Swoo_1967 -56 6 TTATTGTATGTGTACAATTT
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