Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of GntR regulog to Shewanella baltica OS155

Reference regulog properties
Source regulog: GntR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Gluconate utilization
Effector: Gluconate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Shewanella baltica OS155
Orthologous TF(s) Sbal_4089
Regulated genes 2
Built upon 4 sites [see more]
Predicted regulatory interactions in Shewanella baltica OS155
Locus tag Position Score Sequence
Position: -30
Score: 5.7
Sequence: GTAGGTTACCGGTAACATGT
Locus tag: Sbal_4087
Sbal_4087 -30 5.7 GTAGGTTACCGGTAACATGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gntK
Ortholog function: Gluconokinase (EC 2.7.1.12)
Shewanella baltica OS155 Sbal_4087 -30 5.7 GTAGGTTACCGGTAACATGT
-16 5.6 ACATGTTACCCGTAATATGA
Position: -60
Score: 5.7
Sequence: ACATGTTACCGGTAACCTAC
Locus tag: Sbal_4088
Sbal_4088 -60 5.7 ACATGTTACCGGTAACCTAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: gntU
Ortholog function: Low-affinity gluconate/H+ symporter GntU
Shewanella baltica OS155 Sbal_4088 -74 5.6 TCATATTACGGGTAACATGT
-60 5.7 ACATGTTACCGGTAACCTAC
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