Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of SO2282 regulog to Shewanella sp MR-7

Reference regulog properties
Source regulog: SO2282 - Shewanellaceae
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode: repressor
Biological process: Amino acid efflux
Effector:
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Shewanella sp MR-7
Orthologous TF(s) Shewmr7_1833
Regulated genes 2
Built upon 23 sites [see more]
Predicted regulatory interactions in Shewanella sp MR-7
Locus tag Position Score Sequence
Position: -83
Score: 6.6
Sequence: AAATTGTACGCATACAATAT
Locus tag: Shewmr7_1833
Shewmr7_1833 -83 6.6 AAATTGTACGCATACAATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO2282
Ortholog function: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)
Shewanella oneidensis MR-1 SO_2282 -83 6.5 ATATTGTACGCATACAATTA
Shewanella putrefaciens CN-32 Sputcn32_2134 -83 6.3 TAATTGTATGCATACATTGT
Shewanella sp W3-18-1 Sputw3181_1877 -98 6.3 TAATTGTATGCATACATTGT
Shewanella sp ANA-3 Shewana3_2266 -59 6.6 AAATTGTACGCATACAATAT
Shewanella sp MR-4 Shewmr4_1753 -82 6.6 AAATTGTACGCATACAATAT
Shewanella sp MR-7 Shewmr7_1833 -83 6.6 AAATTGTACGCATACAATAT
Shewanella baltica OS155 Sbal_2383 -83 6.6 AAATTGTATGCATACATTTA
Shewanella amazonensis SB2B Sama_2016 -87 6.4 AAATTGTATGGATACAATAA
Shewanella pealeana ATCC 700345 Spea_2527 -86 6 GAATTGTATGAGTACAATAC
Shewanella halifaxensis HAW-EB4 Shal_1726 -86 5.7 CAATTGTATGCATACAAAAA
Shewanella piezotolerans WP3 swp_1877 -20 6.4 TTATTGTACGCATACAATTA
Shewanella woodyi ATCC 51908 Swoo_1966 -85 6 AAATTGTACACATACAATAA
Position: -29
Score: 6.6
Sequence: ATATTGTATGCGTACAATTT
Locus tag: Shewmr7_1834
Shewmr7_1834 -29 6.6 ATATTGTATGCGTACAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO2285
Ortholog function: amino acid efflux protein, RhtB family
Shewanella putrefaciens CN-32 Sputcn32_2133 -29 6.3 ACAATGTATGCATACAATTA
Shewanella sp W3-18-1 Sputw3181_1878 -29 6.3 ACAATGTATGCATACAATTA
Shewanella sp ANA-3 Shewana3_2265 -29 6.6 ATATTGTATGCGTACAATTT
Shewanella sp MR-4 Shewmr4_1754 -29 6.6 ATATTGTATGCGTACAATTT
Shewanella sp MR-7 Shewmr7_1834 -29 6.6 ATATTGTATGCGTACAATTT
Shewanella baltica OS155 Sbal_2382 8 6.6 tAAaTGTATGCATACAATTT
Shewanella amazonensis SB2B Sama_2015 -32 6.4 TTATTGTATCCATACAATTT
Shewanella pealeana ATCC 700345 Spea_2526 -98 6 GTATTGTACTCATACAATTC
Shewanella halifaxensis HAW-EB4 Shal_1727 -95 5.7 TTTTTGTATGCATACAATTG
Shewanella piezotolerans WP3 swp_1879 -146 6.4 TAATTGTATGCGTACAATAA
Shewanella woodyi ATCC 51908 Swoo_1967 -56 6 TTATTGTATGTGTACAATTT
© 2009-2020 RegPrecise