Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagated regulons of Bacillus cereus Q1

Type Regulator Effector Pathway Genes Sites
TF AcoR Acetoin Acetoin utilization 1 1
TF AdaA DNA alkylation response 1 1
TF AnsR Asparagine Asparagine degradation 1 1
TF ArgR Arginine Arginine biosynthesis; Arginine degradation 5 10
TF ArsR Arsenite; Cadmium, ion (Cd2+); Silver ion, (Ag+) Arsenic resistance 1 1
TF BglZ Beta-glucoside Beta-glucosides utilization 2 2
TF BirA Biotin Biotin biosynthesis 3 4
TF BkdR Branched-chain amino acid degradation 2 2
TF CcpA HPr, phosphocarrier protein Carbon catabolism 23 25
TF CcpC Citrate Citrate metabolism 1 1
TF CcpN Gluconeogenesis 2 3
TF CggR Fructose-1,6-diphosphate Glycolysis 1 1
TF CitT Citrate Citrate utilization 1 2
TF CodY Guanosine triphosphate; Branched-chain amino acids Amino acid metabolism 59 119
TF CsoR Copper ion, (Cu+) Copper resistance 1 1
TF CtsR Heat shock Heat shock response 2 2
TF CymR O-acetyl-L-serine; CysK, cysteine synthetase Cysteine metabolism 7 8
TF CzrA Zinc ion, (Zn2+); Silver ion, (Ag+); Nickel ion, (Ni2+); Copper ion, (Cu2+); Cobalt ion, (Co2+); Cadmium, ion (Cd2+) Zinc resistance; Nickel resistance; Copper resistance; Cobalt resistance; Cadmium resistance 2 3
TF FadR Palmitoyl-CoA; Oleoyl-CoA Fatty acid degradation 4 4
TF FapR Malonyl-CoA Fatty acid biosynthesis 4 6
TF FatR Oleate; Gamma-linolenic acid; Linoleate; Phytanate Toxic fatty acid stress response 1 1
TF Fnr Oxygen Anaerobic metabolism 3 4
TF Fur Iron ion, (Fe2+) Iron homeostasis 17 40
TF GlnL GlnK, sensor histidine kinase (glutamine) Aspartate utilization; Glutamine utilization 1 3
TF GlnR Feedback-inhibited GlnA, glutamine synthetase Nitrogen assimilation 4 8
TF GntR D-gluconate; D-glucono-delta-lactone Gluconate utilization 1 1
TF HrcA Heat shock Heat shock response 2 2
TF KipR Sporulation 1 1
TF LexA DNA damage SOS response 9 9
TF LiaR LiaS, sensor histidine kinase (bacitracin, nisin, ramoplanin, vancomycin) Cell wall-active antibiotics stress response 1 1
TF LutR L-lactate Lactate utilization 1 1
TF MalR MalK, sensor histidine kinase (malate) Malate utilization 1 12
TF ManR ManP, mannose-specific enzyme IIBCA PTS component; HPr, phosphocarrier protein Mannose utilization 1 1
TF MhqR 2-Methylhydroquinone and catechol resistance 4 6
TF MntR Manganese ion, (Mn2+) Manganese homeostasis 1 1
TF NagR N-acetylglucosamine-6-phosphate N-acetylglucosamine utilization 1 1
TF NiaR Niacin NAD biosynthesis 3 3
TF NrdR Deoxyribonucleotides Deoxyribonucleotide biosynthesis 1 2
TF OhrR tert-Butyl hydroperoxide; Diamide; Cumene hydroperoxide; Hydrogen peroxide Peroxide stress response 1 1
TF PerR Hydrogen peroxide; Manganese ion, (Mn2+); Iron ion, (Fe2+) Oxidative stress response; Peroxide stress response 12 14
TF PurR 5-phosphoribosyl 1-pyrophosphate Purine metabolism 9 11
TF RbsR Ribose Ribose utilization 1 1
TF Rex NADH Energy metabolism 5 5
TF RocR Ornithine; L-citrulline Arginine degradation; Ornithine degradation 2 2
TF SdpR SdpI, signal transduction protein Toxin-antitoxin system 1 1
TF SinR SinI, antirepressor protein Biofilm formation 1 1
TF TnrA NrgB, ammonium uptake protein; NrgA, ammonium uptake protein; Feedback-inhibited GlnA, glutamine synthetase Nitrogen assimilation 18 27
TF TreR Trehalose-6-phosphate Trehalose utilization 1 2
TF YczG Utilization of aromatic compounds 2 2
TF YdfD/YisV Metabolite transport 2 2
TF YdfL Multidrug resistance 1 1
TF YfmP Metal efflux 1 1
TF YhcF Multidrug resistance; Multidrug efflux 1 1
TF YhgD 1 2
TF YodB/CatR Diamide; Quinone Oxidative stress response 4 7
TF YrkD Multidrug resistance 4 5
TF YtlI L-cystine transporter 1 6
TF YybA Polyamine homeostasis 2 4
TF YybR/YdeP Multidrug resistance 2 2
TF Zur Zinc ion, (Zn2+) Zinc homeostasis 3 3
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