Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing mdcD gene

Properties
Regulog: MdcY - Comamonadaceae
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process: Malonate metabolism
Effector:
Phylum: Proteobacteria/Beta
Built upon 8 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Leptothrix cholodnii SP-6
Position: -61
Score: 3.80008
Sequence: ATGTATACGT
Locus tag: Lcho_0080
Name: Aave_1513
Funciton: putative exported protein
Locus tag: Lcho_0079
Name: mdcA
Funciton: Malonate decarboxylase, alpha subunit
Locus tag: Lcho_0078
Name: mdcC
Funciton: Malonate decarboxylase delta subunit, acyl-carrier protein
Locus tag: Lcho_0077
Name: mdcD
Funciton: Malonate decarboxylase, beta subunit
Locus tag: Lcho_0076
Name: mdcE
Funciton: Malonate decarboxylase gamma subunit
Locus tag: Lcho_0075
Name: mdcG
Funciton: holo-ACP synthase, malonate decarboxylase-specific
Locus tag: Lcho_0074
Name: mdcB
Funciton: Triphosphoribosyl-dephospho-CoA synthetase (EC 2.7.8.25)
Locus tag: Lcho_0073
Name: mdcH
Funciton: Malonyl CoA acyl carrier protein transacylase (EC 2.3.1.39)
Aave_1513-mdcA-mdcC-mdcD-mdcE-mdcG-mdcB-mdcH -61 3.8 ATGTATACGT Lcho_0080
Methylibium petroleiphilum PM1
Position: -56
Score: 4.60648
Sequence: ATGTATACAT
Locus tag: Mpe_A2898
Name: Aave_1513
Funciton: putative exported protein
Locus tag: Mpe_A2897
Name: mdcR
Funciton: Malonate utilization transcriptional regulator, LysR family
Locus tag: Mpe_A2896
Name: matC
Funciton: malonate transporter
Locus tag: Mpe_A2895
Name: mdcA
Funciton: Malonate decarboxylase, alpha subunit
Locus tag: Mpe_A2894
Name: mdcC
Funciton: Malonate decarboxylase delta subunit, acyl-carrier protein
Locus tag: Mpe_A2893
Name: mdcD
Funciton: Malonate decarboxylase, beta subunit
Locus tag: Mpe_A2892
Name: mdcE
Funciton: Malonate decarboxylase gamma subunit
Locus tag: Mpe_A2891
Name: mdcB
Funciton: Triphosphoribosyl-dephospho-CoA synthetase (EC 2.7.8.25)
Aave_1513-mdcR-matC-mdcA-mdcC-mdcD-mdcE-mdcB -56 4.6 ATGTATACAT Mpe_A2898
Rhodoferax ferrireducens DSM 15236
Position: -160
Score: 3.80786
Sequence: TGGTATGCAA
Position: -95
Score: 4.60648
Sequence: ATGTATACAT
Locus tag: Rfer_1840
Name: matP
Funciton: TRAP malonate transporter, periplasmic subunit
Locus tag: Rfer_1841
Name: matQ
Funciton: TRAP malonate transporter, small permease subunit
Locus tag: Rfer_1842
Name: matM
Funciton: TRAP malonate transporter, large permease subunit
Locus tag: Rfer_1843
Name: mdcA
Funciton: Malonate decarboxylase, alpha subunit
Locus tag: Rfer_1844
Name: mdcC
Funciton: Malonate decarboxylase delta subunit, acyl-carrier protein
Locus tag: Rfer_1845
Name: mdcD
Funciton: Malonate decarboxylase, beta subunit
Locus tag: Rfer_1846
Name: mdcE
Funciton: Malonate decarboxylase gamma subunit
Locus tag: Rfer_1847
Name: mdcG
Funciton: holo-ACP synthase, malonate decarboxylase-specific
Locus tag: Rfer_1848
Name: mdcB
Funciton: Triphosphoribosyl-dephospho-CoA synthetase (EC 2.7.8.25)
Locus tag: Rfer_1849
Name: mdcH
Funciton: Malonyl CoA acyl carrier protein transacylase (EC 2.3.1.39)
matP-matQ-matM-mdcA-mdcC-mdcD-mdcE-mdcG-mdcB-mdcH -160 3.8 TGGTATGCAA Rfer_1840
-95 4.6 ATGTATACAT