Orthologous regulated operons containing mdcD gene

Properties
Regulog:	MdcY - Comamonadaceae
Regulator type:	Transcription factor
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Malonate metabolism
Effector:
Phylum:	Proteobacteria/Beta

Built upon 8 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Leptothrix cholodnii SP-6
Position: -61 Score: 3.80008 Sequence: ATGTATACGT Locus tag: Lcho_0080 Name: Aave_1513 Funciton: putative exported protein Locus tag: Lcho_0079 Name: mdcA Funciton: Malonate decarboxylase, alpha subunit Locus tag: Lcho_0078 Name: mdcC Funciton: Malonate decarboxylase delta subunit, acyl-carrier protein Locus tag: Lcho_0077 Name: mdcD Funciton: Malonate decarboxylase, beta subunit Locus tag: Lcho_0076 Name: mdcE Funciton: Malonate decarboxylase gamma subunit Locus tag: Lcho_0075 Name: mdcG Funciton: holo-ACP synthase, malonate decarboxylase-specific Locus tag: Lcho_0074 Name: mdcB Funciton: Triphosphoribosyl-dephospho-CoA synthetase (EC 2.7.8.25) Locus tag: Lcho_0073 Name: mdcH Funciton: Malonyl CoA acyl carrier protein transacylase (EC 2.3.1.39)
Aave_1513-mdcA-mdcC-mdcD-mdcE-mdcG-mdcB-mdcH	-61	3.8	ATGTATACGT	Lcho_0080
Methylibium petroleiphilum PM1
Position: -56 Score: 4.60648 Sequence: ATGTATACAT Locus tag: Mpe_A2898 Name: Aave_1513 Funciton: putative exported protein Locus tag: Mpe_A2897 Name: mdcR Funciton: Malonate utilization transcriptional regulator, LysR family Locus tag: Mpe_A2896 Name: matC Funciton: malonate transporter Locus tag: Mpe_A2895 Name: mdcA Funciton: Malonate decarboxylase, alpha subunit Locus tag: Mpe_A2894 Name: mdcC Funciton: Malonate decarboxylase delta subunit, acyl-carrier protein Locus tag: Mpe_A2893 Name: mdcD Funciton: Malonate decarboxylase, beta subunit Locus tag: Mpe_A2892 Name: mdcE Funciton: Malonate decarboxylase gamma subunit Locus tag: Mpe_A2891 Name: mdcB Funciton: Triphosphoribosyl-dephospho-CoA synthetase (EC 2.7.8.25)
Aave_1513-mdcR-matC-mdcA-mdcC-mdcD-mdcE-mdcB	-56	4.6	ATGTATACAT	Mpe_A2898
Rhodoferax ferrireducens DSM 15236
Position: -160 Score: 3.80786 Sequence: TGGTATGCAA Position: -95 Score: 4.60648 Sequence: ATGTATACAT Locus tag: Rfer_1840 Name: matP Funciton: TRAP malonate transporter, periplasmic subunit Locus tag: Rfer_1841 Name: matQ Funciton: TRAP malonate transporter, small permease subunit Locus tag: Rfer_1842 Name: matM Funciton: TRAP malonate transporter, large permease subunit Locus tag: Rfer_1843 Name: mdcA Funciton: Malonate decarboxylase, alpha subunit Locus tag: Rfer_1844 Name: mdcC Funciton: Malonate decarboxylase delta subunit, acyl-carrier protein Locus tag: Rfer_1845 Name: mdcD Funciton: Malonate decarboxylase, beta subunit Locus tag: Rfer_1846 Name: mdcE Funciton: Malonate decarboxylase gamma subunit Locus tag: Rfer_1847 Name: mdcG Funciton: holo-ACP synthase, malonate decarboxylase-specific Locus tag: Rfer_1848 Name: mdcB Funciton: Triphosphoribosyl-dephospho-CoA synthetase (EC 2.7.8.25) Locus tag: Rfer_1849 Name: mdcH Funciton: Malonyl CoA acyl carrier protein transacylase (EC 2.3.1.39)
matP-matQ-matM-mdcA-mdcC-mdcD-mdcE-mdcG-mdcB-mdcH	-160	3.8	TGGTATGCAA	Rfer_1840
	-95	4.6	ATGTATACAT