Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ribD gene

Properties
Regulator type: RNA regulatory element
Name: FMN
RFAM: RF00050
Regulation mode:
Biological process: Riboflavin biosynthesis
Effector: Flavin mononucleotide
Phylum: Firmicutes
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Anaerocellum thermophilum DSM 6725
Position: -252
Score: 114.52
Sequence: GTCCATCCTTCGGGG...
Locus tag: Athe_0564
Name: ribD
Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: Athe_0563
Name: ribE
Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: Athe_0562
Name: ribBA
Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: Athe_0561
Name: ribH
Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
ribD-ribE-ribBA-ribH -252 114.5 GTCCATCCTTCGGGG... Athe_0564
Caldicellulosiruptor saccharolyticus DSM 8903
Position: -248
Score: 114.94
Sequence: GTCCATCCTTCGGGG...
Locus tag: Csac_0794
Name: ribD
Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: Csac_0793
Name: ribE
Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: Csac_0792
Name: ribBA
Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: Csac_0791
Name: ribH
Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
ribD-ribE-ribBA-ribH -248 114.9 GTCCATCCTTCGGGG... Csac_0794
Carboxydothermus hydrogenoformans Z-2901
Position: -196
Score: 119.85
Sequence: TTACTACCTTCGGGG...
Locus tag: CHY_1475
Name: ribD
Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: CHY_1474
Name: ribE
Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: CHY_1473
Name: ribBA
Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: CHY_1472
Name: ribH
Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
ribD-ribE-ribBA-ribH -196 119.8 TTACTACCTTCGGGG... CHY_1475
Moorella thermoacetica ATCC 39073
Position: -273
Score: 115.07
Sequence: ACGTCCTTCGGGGTT...
Locus tag: Moth_0915
Name: ribD
Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: Moth_0916
Name: ribE
Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: Moth_0917
Name: ribBA
Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
ribD-ribE-ribBA -273 115.1 ACGTCCTTCGGGGTT... Moth_0915
Thermoanaerobacter ethanolicus X514
Position: -199
Score: 113.69
Sequence: AAAACCTTCAGGGAT...
Locus tag: Teth514_0020
Name: ribD
Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: Teth514_0021
Name: ribE
Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: Teth514_0022
Name: ribBA
Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: Teth514_0023
Name: ribH
Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
ribD-ribE-ribBA-ribH -199 113.7 AAAACCTTCAGGGAT... Teth514_0020
Thermoanaerobacter italicus Ab9
Position: -198
Score: 113.69
Sequence: AAAACCTTCAGGGAT...
Locus tag: Thit_0021
Name: ribD
Funciton: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
Locus tag: Thit_0022
Name: ribE
Funciton: Riboflavin synthase alpha chain (EC 2.5.1.9)
Locus tag: Thit_0023
Name: ribBA
Funciton: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II (EC 3.5.4.25)
Locus tag: Thit_0024
Name: ribH
Funciton: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9)
ribD-ribE-ribBA-ribH -198 113.7 AAAACCTTCAGGGAT... Thit_0021