Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing thiC gene

Properties
Regulator type: RNA regulatory element
Name: TPP
RFAM: RF00059
Regulation mode:
Biological process: Thiamine biosynthesis
Effector: Thiamine pyrophosphate
Phylum: Proteobacteria/Beta
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Acidovorax avenae subsp. citrulli AAC00-1
Position: -292
Score: 53.99
Sequence: CGCCTGCTCCGGGGT...
Locus tag: Aave_0829
Name: thiC
Funciton: Thiamin biosynthesis protein ThiC
thiC -292 54 CGCCTGCTCCGGGGT... Aave_0829
Acidovorax sp. JS42
Position: -212
Score: 54.83
Sequence: CGGCCCCGCTCCGGG...
Locus tag: Ajs_3661
Name: thiC
Funciton: Thiamin biosynthesis protein ThiC
thiC -212 54.8 CGGCCCCGCTCCGGG... Ajs_3661
Comamonas testosteroni KF-1
Position: -346
Score: 57.98
Sequence: ATGCAGCTCCGGGGT...
Locus tag: CtesDRAFT_0498
Name: thiC
Funciton: Thiamin biosynthesis protein ThiC
thiC -346 58 ATGCAGCTCCGGGGT... CtesDRAFT_0498
Delftia acidovorans SPH-1
Position: -390
Score: 54.36
Sequence: GCTCTGCTCCGGGGT...
Locus tag: Daci_2313
Name: thiC
Funciton: Thiamin biosynthesis protein ThiC
thiC -390 54.4 GCTCTGCTCCGGGGT... Daci_2313
Leptothrix cholodnii SP-6
Position: -214
Score: 44.31
Sequence: CTCCCGCTCCGGGGT...
Locus tag: Lcho_2430
Name: thiC
Funciton: Thiamin biosynthesis protein ThiC
Locus tag: Lcho_2431
Name: thiO
Funciton: Glycine oxidase ThiO (EC 1.4.3.19)
Locus tag: Lcho_2432
Name: thiS
Funciton: Sulfur carrier protein ThiS
Locus tag: Lcho_2433
Name: thiG
Funciton: Thiazole biosynthesis protein ThiG
Locus tag: Lcho_2434
Name: thiDE
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
thiC-thiO-thiS-thiG-thiDE -214 44.3 CTCCCGCTCCGGGGT... Lcho_2430
Methylibium petroleiphilum PM1
Position: -178
Score: 56.76
Sequence: GAGCACTGCTCCGGG...
Locus tag: Mpe_A1610
Name: thiC
Funciton: Thiamin biosynthesis protein ThiC
Locus tag: Mpe_A1609
Name: thiO
Funciton: Glycine oxidase ThiO (EC 1.4.3.19)
Locus tag: Mpe_A1608
Name: thiS
Funciton: Sulfur carrier protein ThiS
Locus tag: Mpe_A1607
Name: thiG
Funciton: Thiazole biosynthesis protein ThiG
Locus tag: Mpe_A1606
Name: thiDE
Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) / Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
thiC-thiO-thiS-thiG-thiDE -178 56.8 GAGCACTGCTCCGGG... Mpe_A1610
Polaromonas naphthalenivorans CJ2
Position: -204
Score: 75.86
Sequence: GCAGCTTGTCGGGGT...
Locus tag: Pnap_0019
Name: thiC
Funciton: Thiamin biosynthesis protein ThiC
thiC -204 75.9 GCAGCTTGTCGGGGT... Pnap_0019
Polaromonas sp. JS666
Position: -182
Score: 75.41
Sequence: AAAGCTTGTCGGGGT...
Locus tag: Bpro_0037
Name: thiC
Funciton: Thiamin biosynthesis protein ThiC
Locus tag: Bpro_0038
Name: thiO
Funciton: Glycine oxidase ThiO (EC 1.4.3.19)
thiC-thiO -182 75.4 AAAGCTTGTCGGGGT... Bpro_0037
Rhodoferax ferrireducens DSM 15236
Position: -197
Score: 60.84
Sequence: CGCCCTGCCCGGGGT...
Locus tag: Rfer_1708
Name: thiC
Funciton: Thiamin biosynthesis protein ThiC
thiC -197 60.8 CGCCCTGCCCGGGGT... Rfer_1708
Variovorax paradoxus S110
Position: -196
Score: 60.02
Sequence: AGTCCCCGCTCCGGG...
Locus tag: Vapar_4728
Name: thiC
Funciton: Thiamin biosynthesis protein ThiC
thiC -196 60 AGTCCCCGCTCCGGG... Vapar_4728
Verminephrobacter eiseniae EF01-2
Position: -224
Score: 54.33
Sequence: GGCCGCTGCTCCGGG...
Locus tag: Veis_1523
Name: thiC
Funciton: Thiamin biosynthesis protein ThiC
thiC -224 54.3 GGCCGCTGCTCCGGG... Veis_1523
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