Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rpsO gene

Properties
Regulator type: RNA regulatory element
Name: S15
RFAM: RF00114
Regulation mode:
Biological process: Ribosome biogenesis
Effector:
Phylum: Proteobacteria
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Photobacterium profundum SS9
Position: -60
Score: 81.21
Sequence: GTGTCGGCTGAATCA...
Locus tag: PBPRA0615
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -60 81.2 GTGTCGGCTGAATCA... PBPRA0615
Vibrio angustum S14
Position: -63
Score: 87.11
Sequence: GGGTGTCGGCTGAAT...
Locus tag: VAS14_07319
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -63 87.1 GGGTGTCGGCTGAAT... VAS14_07319
Vibrio cholerae O1 biovar eltor str. N16961
Position: -63
Score: 94.09
Sequence: GTGTCGGCTGAATCA...
Locus tag: VC0646
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -63 94.1 GTGTCGGCTGAATCA... VC0646
Vibrio fischeri ES114
Position: -62
Score: 92.93
Sequence: GTAGTGGCTGAATCA...
Locus tag: VF_0489
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -62 92.9 GTAGTGGCTGAATCA... VF_0489
Vibrio parahaemolyticus RIMD 2210633
Position: -64
Score: 91.51
Sequence: TCGTGTCGGCTGAAT...
Locus tag: VP2453
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -64 91.5 TCGTGTCGGCTGAAT... VP2453
Vibrio salmonicida LFI1238
Position: -62
Score: 92.38
Sequence: GTAGTGGCTGAATCA...
Locus tag: VSAL_I0601
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -62 92.4 GTAGTGGCTGAATCA... VSAL_I0601
Vibrio shilonii AK1
Position: -65
Score: 91.61
Sequence: GCGTAGCGGCTGAAT...
Locus tag: VSAK1_10978
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -65 91.6 GCGTAGCGGCTGAAT... VSAK1_10978
Vibrio splendidus LGP32
Position: -64
Score: 91.39
Sequence: GCGTAGCGGCTGAAT...
Locus tag: VS_2479
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -64 91.4 GCGTAGCGGCTGAAT... VS_2479
Vibrio vulnificus CMCP6
Position: -62
Score: 96.8
Sequence: GTGTCGGCTGAATCA...
Locus tag: VV1_1701
Name: rpsO
Funciton: SSU ribosomal protein S15p (S13e)
rpsO -62 96.8 GTGTCGGCTGAATCA... VV1_1701