Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing speF gene

Properties
Regulator type: RNA regulatory element
Name: speF
RFAM: RF00518
Regulation mode:
Biological process: Ornithine degradation
Effector:
Phylum: Proteobacteria
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Agrobacterium tumefaciens str. C58 (Cereon)
Position: -404
Score: 292.02
Sequence: TGCTGCCCAAAGTCG...
Locus tag: Atu3196
Name: speF
Funciton: Ornithine decarboxylase (EC 4.1.1.17) / Arginine decarboxylase (EC 4.1.1.19)
speF -404 292 TGCTGCCCAAAGTCG... Atu3196
Azorhizobium caulinodans ORS 571
Position: -495
Score: 144.02
Sequence: TCCTGCCCAATTTCG...
Locus tag: AZC_0333
Name: speF
Funciton: Ornithine decarboxylase (EC 4.1.1.17) / Arginine decarboxylase (EC 4.1.1.19)
speF -495 144 TCCTGCCCAATTTCG... AZC_0333
Bartonella quintana str. Toulouse
Position: -431
Score: 309.17
Sequence: GCTTGCCCAAAGTCG...
Locus tag: BQ10050
Name: speF
Funciton: Ornithine decarboxylase (EC 4.1.1.17) / Arginine decarboxylase (EC 4.1.1.19)
speF -431 309.2 GCTTGCCCAAAGTCG... BQ10050
Brucella melitensis 16M
Position: -404
Score: 327.72
Sequence: GCTTGCCCAAAGTCG...
Locus tag: BMEII1133
Name: speF
Funciton: Ornithine decarboxylase (EC 4.1.1.17) / Arginine decarboxylase (EC 4.1.1.19)
speF -404 327.7 GCTTGCCCAAAGTCG... BMEII1133
Mesorhizobium loti MAFF303099
Position: -437
Score: 286.67
Sequence: GCTTGCCCAAAGTCG...
Locus tag: mll2974
Name: speF
Funciton: Ornithine decarboxylase (EC 4.1.1.17) / Arginine decarboxylase (EC 4.1.1.19)
speF -437 286.7 GCTTGCCCAAAGTCG... mll2974
Mesorhizobium sp. BNC1
Position: -426
Score: 256.96
Sequence: TTGCCCAAAGTCGCA...
Locus tag: Meso_2715
Name: speF
Funciton: Ornithine decarboxylase (EC 4.1.1.17) / Arginine decarboxylase (EC 4.1.1.19)
speF -426 257 TTGCCCAAAGTCGCA... Meso_2715
Nitrobacter winogradskyi Nb-255
Position: -485
Score: 168.8
Sequence: TACTGCCCAATTTCG...
Locus tag: Nwi_0924
Name: speF
Funciton: Ornithine decarboxylase (EC 4.1.1.17) / Arginine decarboxylase (EC 4.1.1.19)
speF -485 168.8 TACTGCCCAATTTCG... Nwi_0924
Rhizobium leguminosarum bv. viciae 3841
Position: -411
Score: 277.3
Sequence: CTCAGCCCAAAGTCG...
Locus tag: RL4156
Name: speF
Funciton: Ornithine decarboxylase (EC 4.1.1.17) / Arginine decarboxylase (EC 4.1.1.19)
speF -411 277.3 CTCAGCCCAAAGTCG... RL4156
Rhizobium sp. NGR234
Position: -406
Score: 312.89
Sequence: CCTTGCCCAAAGTCG...
Locus tag: NGR_c29260
Name: speF
Funciton: Ornithine decarboxylase (EC 4.1.1.17) / Arginine decarboxylase (EC 4.1.1.19)
speF -406 312.9 CCTTGCCCAAAGTCG... NGR_c29260
Rhodopseudomonas palustris CGA009
Position: -467
Score: 209.03
Sequence: CCTTGCCCAATTTCG...
Locus tag: RPA0870
Name: speF
Funciton: Ornithine decarboxylase (EC 4.1.1.17) / Arginine decarboxylase (EC 4.1.1.19)
speF -467 209 CCTTGCCCAATTTCG... RPA0870
Sinorhizobium meliloti 1021
Position: -398
Score: 322.56
Sequence: CCTTGCCCAAAGTCG...
Locus tag: SMc02983
Name: speF
Funciton: Ornithine decarboxylase (EC 4.1.1.17) / Arginine decarboxylase (EC 4.1.1.19)
speF -398 322.6 CCTTGCCCAAAGTCG... SMc02983
Xanthobacter autotrophicus Py2
Position: -495
Score: 111.15
Sequence: CTTTGCCCAAATTCG...
Locus tag: Xaut_2140
Name: speF
Funciton: Ornithine decarboxylase (EC 4.1.1.17) / Arginine decarboxylase (EC 4.1.1.19)
speF -495 111.2 CTTTGCCCAAATTCG... Xaut_2140