Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ucaB gene

Properties
Regulator type: RNA regulatory element
Name: mini-ykkC
RFAM: RF01068
Regulation mode:
Biological process: Multidrug resistance
Effector:
Phylum: Proteobacteria
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Azorhizobium caulinodans ORS 571
Position: -76
Score: 36.44
Sequence: GACCGGGACGACCCG...
Locus tag: AZC_4400
Name: amt1
Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
Locus tag: AZC_4401
Name: amt2
Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
Locus tag: AZC_4402
Name: ucaA
Funciton: Urea carboxylase (EC 6.3.4.6)
Locus tag: AZC_4403
Name: ucaB
Funciton: Allophanate hydrolase (EC 3.5.1.54) # truncated
amt1-amt2-ucaA-ucaB -76 36.4 GACCGGGACGACCCG... AZC_4400
Rhizobium etli CFN 42
Position: -70
Score: 34.69
Sequence: CCGACCGGGACGGCC...
Locus tag: RHE_PE00120
Name: amt1
Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
Locus tag: RHE_PE00119
Name: amt2
Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
Locus tag: RHE_PE00118
Name: ucaA
Funciton: Urea carboxylase (EC 6.3.4.6)
Locus tag: RHE_PE00117
Name: ucaB
Funciton: Allophanate hydrolase (EC 3.5.1.54)
amt1-amt2-ucaA-ucaB -70 34.7 CCGACCGGGACGGCC... RHE_PE00120
Rhizobium leguminosarum bv. viciae 3841
Position: -74
Score: 37.06
Sequence: GACCGGGACGGCCCG...
Locus tag: pRL90291
Name: amt1
Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
Locus tag: pRL90292
Name: amt2
Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
Locus tag: pRL90293
Name: ucaA
Funciton: Urea carboxylase (EC 6.3.4.6)
Locus tag: pRL90294
Name: ucaB
Funciton: Allophanate hydrolase (EC 3.5.1.54)
amt1-amt2-ucaA-ucaB -74 37.1 GACCGGGACGGCCCG... pRL90291
Rhodopseudomonas palustris CGA009
Position: -73
Score: 35.98
Sequence: CCGGCCGGGACGACC...
Locus tag: RPA1407
Name: amt1
Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
Locus tag: RPA1406
Name: amt2
Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
Locus tag: RPA1405
Name: ucaA
Funciton: Urea carboxylase (EC 6.3.4.6)
Locus tag: RPA1404
Name: ucaB
Funciton: Allophanate hydrolase (EC 3.5.1.54)
amt1-amt2-ucaA-ucaB -73 36 CCGGCCGGGACGACC... RPA1407
Xanthobacter autotrophicus Py2
Position: -79
Score: 36.69
Sequence: CAGGCCGGGACGACC...
Locus tag: Xaut_1224
Name: amt1
Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
Locus tag: Xaut_1223
Name: amt2
Funciton: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10)
Locus tag: Xaut_1222
Name: ucaA
Funciton: Urea carboxylase (EC 6.3.4.6)
Locus tag: Xaut_1221
Name: ucaB
Funciton: Allophanate hydrolase (EC 3.5.1.54) # truncated
amt1-amt2-ucaA-ucaB -79 36.7 CAGGCCGGGACGACC... Xaut_1224