Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing COG0011 gene

Properties
Regulator type: RNA regulatory element
Name: TPP
RFAM: RF00059
Regulation mode:
Biological process: Thiamine biosynthesis
Effector: Thiamine pyrophosphate
Phylum: Chloroflexi
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Chloroflexus aggregans DSM 9485
Position: -184
Score: 70.23
Sequence: TATGTAGCGAGGGGT...
Locus tag: Cagg_3115
Name: COG0011
Funciton: Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family
Locus tag: Cagg_3116
Name: thiX
Funciton: Hydroxymethylpyrimidine ABC transporter, transmembrane component
Locus tag: Cagg_3117
Name: thiY
Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component
Locus tag: Cagg_3118
Name: thiZ
Funciton: Hydroxymethylpyrimidine ABC transporter, ATPase component
COG0011-thiX-thiY-thiZ -184 70.2 TATGTAGCGAGGGGT... Cagg_3115
Chloroflexus sp. Y-400-fl
Position: -197
Score: 67.7
Sequence: TACGCGCTGCCAGGG...
Locus tag: Chy400_0456
Name: COG0011
Funciton: Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family
Locus tag: Chy400_0455
Name: thiX
Funciton: Hydroxymethylpyrimidine ABC transporter, transmembrane component
Locus tag: Chy400_0454
Name: thiY
Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component
Locus tag: Chy400_0453
Name: thiZ
Funciton: Hydroxymethylpyrimidine ABC transporter, ATPase component
COG0011-thiX-thiY-thiZ -197 67.7 TACGCGCTGCCAGGG... Chy400_0456
Roseiflexus castenholzii DSM 13941
Position: -157
Score: 58.1
Sequence: AGGGGAGCCAGGTGA...
Locus tag: Rcas_0665
Name: COG0011
Funciton: Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family
Locus tag: Rcas_0666
Name: thiX
Funciton: Hydroxymethylpyrimidine ABC transporter, transmembrane component
Locus tag: Rcas_0667
Name: thiY
Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component
Locus tag: Rcas_0668
Name: thiZ
Funciton: Hydroxymethylpyrimidine ABC transporter, ATPase component
COG0011-thiX-thiY-thiZ -157 58.1 AGGGGAGCCAGGTGA... Rcas_0665
Roseiflexus sp. RS-1
Position: -218
Score: 59.61
Sequence: AGGGGAGCCAGGAGA...
Locus tag: RoseRS_0668
Name: COG0011
Funciton: Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family
Locus tag: RoseRS_0669
Name: thiX
Funciton: Hydroxymethylpyrimidine ABC transporter, transmembrane component
Locus tag: RoseRS_0670
Name: thiY
Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component
Locus tag: RoseRS_0671
Name: thiZ
Funciton: Hydroxymethylpyrimidine ABC transporter, ATPase component
COG0011-thiX-thiY-thiZ -218 59.6 AGGGGAGCCAGGAGA... RoseRS_0668