Orthologous regulated operons containing COG0011 gene

Properties
Regulator type:	RNA regulatory element
Name:	TPP
RFAM:	RF00059
Regulation mode:
Biological process:	Thiamine biosynthesis
Effector:	Thiamine pyrophosphate
Phylum:	Firmicutes

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Clostridium acetobutylicum ATCC 824
Position: -156 Score: 72.29 Sequence: TTTAGTGCTAGGGGT... Locus tag: CAC1397 Name: COG0084 Funciton: TatD-related deoxyribonuclease, COG0084 Locus tag: CAC1398 Name: COG0011 Funciton: Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family Locus tag: CAC1399 Name: thiX Funciton: Thiamin ABC transporter, transmembrane component Locus tag: CAC1400 Name: thiY Funciton: Thiamin ABC transporter, substrate-binding component Locus tag: CAC1401 Name: thiZ Funciton: Thiamin ABC transporter, ATPase component
COG0084-COG0011-thiX-thiY-thiZ	-156	72.3	TTTAGTGCTAGGGGT...	CAC1397
Clostridium bolteae ATCC BAA-613
Position: -189 Score: 61.04 Sequence: ACAATGAAAAGGGGT... Locus tag: CLOBOL_05155 Name: COG0011 Funciton: Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family Locus tag: CLOBOL_05156 Name: thiX Funciton: Thiamin ABC transporter, transmembrane component Locus tag: CLOBOL_05157 Name: thiY Funciton: Thiamin ABC transporter, substrate-binding component Locus tag: CLOBOL_05158 Name: thiZ Funciton: Thiamin ABC transporter, ATPase component
COG0011-thiX-thiY-thiZ	-189	61	ACAATGAAAAGGGGT...	CLOBOL_05155
Clostridium botulinum A str. ATCC 3502
Position: -191 Score: 75.69 Sequence: TATGTAAATGCAGGG... Locus tag: CBO2913 Name: purF2 Funciton: Amidophosphoribosyltransferase (EC 2.4.2.14) Locus tag: CBO2911 Name: thiC Funciton: Thiamine biosynthesis protein ThiC Locus tag: CBO2910 Name: COG0011 Funciton: Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family
purF2-thiC-COG0011	-191	75.7	TATGTAAATGCAGGG...	CBO2913
Clostridium leptum DSM 753
Position: -199 Score: 59.95 Sequence: ATAGAATACCGGGGT... Locus tag: CLOLEP_00999 Name: COG0011 Funciton: Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family Locus tag: CLOLEP_01000 Name: thiX Funciton: Thiamin ABC transporter, transmembrane component Locus tag: CLOLEP_01001 Name: thiY Funciton: Thiamin ABC transporter, substrate-binding component Locus tag: CLOLEP_01002 Name: thiZ Funciton: Thiamin ABC transporter, ATPase component
COG0011-thiX-thiY-thiZ	-199	60	ATAGAATACCGGGGT...	CLOLEP_00999
Clostridium nexile DSM 1787
Position: -226 Score: 67.07 Sequence: GAAAAGAAATCAGGG... Locus tag: CLONEX_00344 Name: COG0011 Funciton: Cytoplasmic thiamin-binding component of thiamin ABC transporter, COG0011 family Locus tag: CLONEX_00343 Name: thiX Funciton: Thiamin ABC transporter, transmembrane component
COG0011-thiX	-226	67.1	GAAAAGAAATCAGGG...	CLONEX_00344