Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing serS gene

Properties
Regulator type: RNA regulatory element
Name: T-box
RFAM: RF00230
Regulation mode:
Biological process: Amino acid metabolism
Effector: Ser-tRNA
Phylum: Firmicutes
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Clostridium acetobutylicum ATCC 824
Position: -376
Score: 108.21
Sequence: ATAAACCGTTGAAGA...
Locus tag: CAC0014
Name: yurG
Funciton: Serine--pyruvate aminotransferase (EC 2.6.1.51)
Locus tag: CAC0015
Name: serA
Funciton: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)
Locus tag: CAC0016
Name: CAC0016
Funciton: Related to HTH domain of SpoOJ/ParA/ParB/repB family, involved in chromosome partitioning
Locus tag: CAC0017
Name: serS
Funciton: Seryl-tRNA synthetase (EC 6.1.1.11)
yurG-serA-CAC0016-serS -376 108.2 ATAAACCGTTGAAGA... CAC0014
Clostridium beijerincki NCIMB 8052
Position: -272
Score: 104.62
Sequence: AAACAGCGATGATAA...
Locus tag: Cbei_1431
Name: serS
Funciton: Seryl-tRNA synthetase (EC 6.1.1.11)
serS -272 104.6 AAACAGCGATGATAA... Cbei_1431
Clostridium botulinum A str. ATCC 3502
Position: -283
Score: 131.06
Sequence: TAAAACCTGTGAAGA...
Locus tag: CBO0016
Name: serS
Funciton: Seryl-tRNA synthetase (EC 6.1.1.11)
serS -283 131.1 TAAAACCTGTGAAGA... CBO0016
Clostridium butyricum 5521
Position: -293
Score: 80.54
Sequence: AATAGGCGTTATTAT...
Locus tag: CBY_1480
Name: serS
Funciton: Seryl-tRNA synthetase (EC 6.1.1.11)
serS -293 80.5 AATAGGCGTTATTAT... CBY_1480
Clostridium cellulolyticum H10
Position: -286
Score: 96.57
Sequence: AAAAACAGCGATTAT...
Locus tag: Ccel_3183
Name: serS
Funciton: Seryl-tRNA synthetase (EC 6.1.1.11)
serS -286 96.6 AAAAACAGCGATTAT... Ccel_3183
Clostridium difficile 630
Position: -330
Score: 132.39
Sequence: AAAAAGCTGTGAAGG...
Locus tag: CD0014
Name: serS
Funciton: Seryl-tRNA synthetase (EC 6.1.1.11)
serS -330 132.4 AAAAAGCTGTGAAGG... CD0014
Clostridium hiranonis DSM 13275
Position: -343
Score: 134.29
Sequence: TGAAAAGGCAATGAA...
Locus tag: CLOHIR_02081
Name: serS
Funciton: Seryl-tRNA synthetase (EC 6.1.1.11)
serS -343 134.3 TGAAAAGGCAATGAA... CLOHIR_02081
Clostridium novyi NT
Position: -274
Score: 120.3
Sequence: ATTTAAACCATTGAA...
Locus tag: NT01CX_0848
Name: serS
Funciton: Seryl-tRNA synthetase (EC 6.1.1.11)
serS -274 120.3 ATTTAAACCATTGAA... NT01CX_0848
Clostridium perfringens ATCC 13124
Position: -293
Score: 115.66
Sequence: ATAAACCGTTGATCA...
Locus tag: CPF_0014
Name: serS
Funciton: Seryl-tRNA synthetase (EC 6.1.1.11)
serS -293 115.7 ATAAACCGTTGATCA... CPF_0014
Clostridium phytofermentans ISDg
Position: -392
Score: 97.46
Sequence: TCACGGTGATGATAA...
Locus tag: null
Name: serS
Funciton: Seryl-tRNA synthetase (EC 6.1.1.11)
serS -392 97.5 TCACGGTGATGATAA... null
Clostridium sp. OhILAs
Position: -397
Score: 129.24
Sequence: TTAATGCGAAGAAGA...
Locus tag: Clos_0014
Name: serS
Funciton: Seryl-tRNA synthetase (EC 6.1.1.11)
serS -397 129.2 TTAATGCGAAGAAGA... Clos_0014
Clostridium tetani E88
Position: -255
Score: 116.32
Sequence: ATTGAAACCTATGAA...
Locus tag: CTC00081
Name: serS
Funciton: Seryl-tRNA synthetase (EC 6.1.1.11)
serS -255 116.3 ATTGAAACCTATGAA... CTC00081
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