Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ribA2 gene

Properties
Regulog: RutR - Ralstonia
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor (activator)
Biological process: Pyrimidine utilization
Effector: Uracil
Phylum: Proteobacteria/beta
Built upon 4 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Cupriavidus taiwanensis
Position: -43
Score: 7.13329
Sequence: ACCTGACCGATTGGTCAGGA
Locus tag: RALTA_B1434
Name: ribA2
Funciton: GTP cyclohydrolase II (EC 3.5.4.25 ) homolog
Locus tag: RALTA_B1433
Name: PF07958
Funciton: Conserved hypothetical protein
Locus tag: RALTA_B1432
Name: upp
Funciton: Uracil phosphoribosyltransferase (EC 2.4.2.9)
Locus tag: RALTA_B1431
Name: rutR
Funciton: Transcriptional regulator, TetR family
Locus tag: RALTA_B1430
Name: codA
Funciton: Cytosine deaminase (EC 3.5.4.1)
ribA2-PF07958-upp-rutR-codA -43 7.1 ACCTGACCGATTGGTCAGGA RALTA_B1434
Ralstonia eutropha H16
Position: -43
Score: 7.31907
Sequence: ACCTGACCATTTGGTCAGGA
Locus tag: H16_B1597
Name: ribA2
Funciton: GTP cyclohydrolase II (EC 3.5.4.25 ) homolog
Locus tag: H16_B1596
Name: PF07958
Funciton: Conserved hypothetical protein
Locus tag: H16_B1595
Name: upp
Funciton: Uracil phosphoribosyltransferase (EC 2.4.2.9)
Locus tag: H16_B1594
Name: rutR
Funciton: Transcriptional regulator, TetR family
Locus tag: H16_B1593
Name: codA
Funciton: Cytosine deaminase (EC 3.5.4.1)
ribA2-PF07958-upp-rutR-codA -43 7.3 ACCTGACCATTTGGTCAGGA H16_B1597
Ralstonia eutropha JMP134
Position: -45
Score: 7.13329
Sequence: ACTTGACCATTTGGTCAGGA
Locus tag: Reut_B3985
Name: ribA2
Funciton: GTP cyclohydrolase II (EC 3.5.4.25 ) homolog
Locus tag: Reut_B3986
Name: PF07958
Funciton: Conserved hypothetical protein
Locus tag: Reut_B3987
Name: upp
Funciton: Uracil phosphoribosyltransferase (EC 2.4.2.9)
Locus tag: Reut_B3988
Name: rutR
Funciton: Transcriptional regulator, TetR family
Locus tag: Reut_B3989
Name: ppuB
Funciton: Predicted ABC transporter, substrate-binding protein precursor
Locus tag: Reut_B3990
Name: ppuA
Funciton: Predicted ABC transporter, ATP-binding protein
Locus tag: Reut_B3991
Name: ppuC
Funciton: Predicted ABC transporter, permease protein
Locus tag: Reut_B3992
Name: ppuD
Funciton: Predicted ABC transporter, inner membrane protein precursor
Locus tag: Reut_B3993
Name: codA
Funciton: Cytosine deaminase (EC 3.5.4.1)
ribA2-PF07958-upp-rutR-ppuB-ppuA-ppuC-ppuD-codA -45 7.1 ACTTGACCATTTGGTCAGGA Reut_B3985
Ralstonia metallidurans CH34
Position: -45
Score: 6.94751
Sequence: ACCTGACCAACTGGTCAGGT
Locus tag: Rmet_4572
Name: ribA2
Funciton: GTP cyclohydrolase II (EC 3.5.4.25 ) homolog
Locus tag: Rmet_4571
Name: PF07958
Funciton: Conserved hypothetical protein
Locus tag: Rmet_4570
Name: upp
Funciton: Uracil phosphoribosyltransferase (EC 2.4.2.9)
Locus tag: Rmet_4569
Name: rutR
Funciton: Transcriptional regulator, TetR family
Locus tag: Rmet_4568
Name: codA
Funciton: Cytosine deaminase (EC 3.5.4.1)
ribA2-PF07958-upp-rutR-codA -45 6.9 ACCTGACCAACTGGTCAGGT Rmet_4572