Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing atpD gene

Properties
Regulog: Rex - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Phylum: Proteobacteria/delta
Built upon 107 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Desulfohalobium retbaense DSM 5692
Position: -35
Score: 4.30625
Sequence: TTTGAACCAAAATTCACATA
Locus tag: Dret_2217
Name: atpF1
Funciton: ATP synthase B' chain (EC 3.6.3.14)
Locus tag: Dret_2216
Name: atpF2
Funciton: ATP synthase F0, B subunit
Locus tag: Dret_2215
Name: atpH
Funciton: ATP synthase delta chain (EC 3.6.3.14)
Locus tag: Dret_2214
Name: atpA
Funciton: ATP synthase alpha chain (EC 3.6.3.14)
Locus tag: Dret_2213
Name: atpG
Funciton: ATP synthase gamma chain (EC 3.6.3.14)
Locus tag: Dret_2212
Name: atpD
Funciton: ATP synthase beta chain (EC 3.6.3.14)
Locus tag: Dret_2211
Name: atpC
Funciton: ATP synthase epsilon chain (EC 3.6.3.14)
atpF1-atpF2-atpH-atpA-atpG-atpD-atpC -35 4.3 TTTGAACCAAAATTCACATA Dret_2217
Desulfomicrobium baculatum DSM 4028
Position: -36
Score: 4.86799
Sequence: TTTGAACAAAAATTCACAAC
Locus tag: Dbac_3361
Name: atpF1
Funciton: ATP synthase B' chain (EC 3.6.3.14)
Locus tag: Dbac_3362
Name: atpF2
Funciton: ATP synthase F0, B subunit
Locus tag: Dbac_3363
Name: atpH
Funciton: ATP synthase delta chain (EC 3.6.3.14)
Locus tag: Dbac_3364
Name: atpA
Funciton: ATP synthase alpha chain (EC 3.6.3.14)
Locus tag: Dbac_3365
Name: atpG
Funciton: ATP synthase gamma chain (EC 3.6.3.14)
Locus tag: Dbac_3366
Name: atpD
Funciton: ATP synthase beta chain (EC 3.6.3.14)
Locus tag: Dbac_3367
Name: atpC
Funciton: ATP synthase epsilon chain (EC 3.6.3.14)
atpF1-atpF2-atpH-atpA-atpG-atpD-atpC -36 4.9 TTTGAACAAAAATTCACAAC Dbac_3361
Desulfovibrio desulfuricans G20
Position: -121
Score: 4.97725
Sequence: TTCAGGAAATTTTTCACAAG
Position: -38
Score: 4.90083
Sequence: TTTGAGCTTAAATTCACAAC
Locus tag: Dde_0990
Name: atpF1
Funciton: ATP synthase B' chain (EC 3.6.3.14)
Locus tag: Dde_0989
Name: atpF2
Funciton: ATP synthase F0, B subunit
Locus tag: Dde_0988
Name: atpH
Funciton: ATP synthase delta chain (EC 3.6.3.14)
Locus tag: Dde_0987
Name: atpA
Funciton: ATP synthase alpha chain (EC 3.6.3.14)
Locus tag: Dde_0986
Name: atpG
Funciton: ATP synthase gamma chain (EC 3.6.3.14)
Locus tag: Dde_0985
Name: atpD
Funciton: ATP synthase beta chain (EC 3.6.3.14)
Locus tag: Dde_0984
Name: atpC
Funciton: ATP synthase epsilon chain (EC 3.6.3.14)
atpF1-atpF2-atpH-atpA-atpG-atpD-atpC -121 5 TTCAGGAAATTTTTCACAAG Dde_0990
-38 4.9 TTTGAGCTTAAATTCACAAC
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
Position: -113
Score: 5.04945
Sequence: CTTGCGAAATTTGTCACCAA
Locus tag: Ddes_2183
Name: atpF1
Funciton: ATP synthase B' chain (EC 3.6.3.14)
Locus tag: Ddes_2184
Name: atpF2
Funciton: ATP synthase F0, B subunit
Locus tag: Ddes_2185
Name: atpH
Funciton: ATP synthase delta chain (EC 3.6.3.14)
Locus tag: Ddes_2186
Name: atpA
Funciton: ATP synthase alpha chain (EC 3.6.3.14)
Locus tag: Ddes_2187
Name: atpG
Funciton: ATP synthase gamma chain (EC 3.6.3.14)
Locus tag: Ddes_2188
Name: atpD
Funciton: ATP synthase beta chain (EC 3.6.3.14)
Locus tag: Ddes_2189
Name: atpC
Funciton: ATP synthase epsilon chain (EC 3.6.3.14)
atpF1-atpF2-atpH-atpA-atpG-atpD-atpC -113 5 CTTGCGAAATTTGTCACCAA Ddes_2183
Desulfovibrio magneticus RS-1
Position: -163
Score: 4.62286
Sequence: TTCGGTCAATTCTTCACAAA
Position: -36
Score: 5.10432
Sequence: TTTGCAAAAATTTTCACAAC
Locus tag: DMR_04760
Name: atpF1
Funciton: ATP synthase B' chain (EC 3.6.3.14)
Locus tag: DMR_04770
Name: atpF2
Funciton: ATP synthase F0, B subunit
Locus tag: DMR_04780
Name: atpH
Funciton: ATP synthase delta chain (EC 3.6.3.14)
Locus tag: DMR_04790
Name: atpA
Funciton: ATP synthase alpha chain (EC 3.6.3.14)
Locus tag: DMR_04800
Name: atpG
Funciton: ATP synthase gamma chain (EC 3.6.3.14)
Locus tag: DMR_04810
Name: atpD
Funciton: ATP synthase beta chain (EC 3.6.3.14)
Locus tag: DMR_04820
Name: atpC
Funciton: ATP synthase epsilon chain (EC 3.6.3.14)
atpF1-atpF2-atpH-atpA-atpG-atpD-atpC -163 4.6 TTCGGTCAATTCTTCACAAA DMR_04760
-36 5.1 TTTGCAAAAATTTTCACAAC
Desulfovibrio piger ATCC 29098
Position: -99
Score: 4.98372
Sequence: TTTGCGAATTTTGTCACCAA
Locus tag: DESPIG_02016
Name: atpF1
Funciton: ATP synthase B' chain (EC 3.6.3.14)
Locus tag: DESPIG_02015
Name: atpF2
Funciton: ATP synthase F0, B subunit
Locus tag: DESPIG_02014
Name: atpH
Funciton: ATP synthase delta chain (EC 3.6.3.14)
Locus tag: DESPIG_02013
Name: atpA
Funciton: ATP synthase alpha chain (EC 3.6.3.14)
Locus tag: DESPIG_02012
Name: atpG
Funciton: ATP synthase gamma chain (EC 3.6.3.14)
Locus tag: DESPIG_02011
Name: atpD
Funciton: ATP synthase beta chain (EC 3.6.3.14)
Locus tag: DESPIG_02010
Name: atpC
Funciton: ATP synthase epsilon chain (EC 3.6.3.14)
atpF1-atpF2-atpH-atpA-atpG-atpD-atpC -99 5 TTTGCGAATTTTGTCACCAA DESPIG_02016
Desulfovibrio salexigens DSM 2638
Position: -150
Score: 4.52037
Sequence: TTAGTTAAAAAAATAACAAG
Position: -36
Score: 4.76213
Sequence: TTTGGACAAAAATTCACAAC
Locus tag: Desal_3459
Name: atpF1
Funciton: ATP synthase B' chain (EC 3.6.3.14)
Locus tag: Desal_3458
Name: atpF2
Funciton: ATP synthase F0, B subunit
Locus tag: Desal_3457
Name: atpH
Funciton: ATP synthase delta chain (EC 3.6.3.14)
Locus tag: Desal_3456
Name: atpA
Funciton: ATP synthase alpha chain (EC 3.6.3.14)
Locus tag: Desal_3455
Name: atpG
Funciton: ATP synthase gamma chain (EC 3.6.3.14)
Locus tag: Desal_3454
Name: atpD
Funciton: ATP synthase beta chain (EC 3.6.3.14)
Locus tag: Desal_3453
Name: atpC
Funciton: ATP synthase epsilon chain (EC 3.6.3.14)
atpF1-atpF2-atpH-atpA-atpG-atpD-atpC -150 4.5 TTAGTTAAAAAAATAACAAG Desal_3459
-36 4.8 TTTGGACAAAAATTCACAAC
Desulfovibrio vulgaris Hildenborough
Position: -59
Score: 5.0124
Sequence: TTTGAGCTTTAATTCACAAC
Locus tag: DVU0780
Name: atpF1
Funciton: ATP synthase B' chain (EC 3.6.3.14)
Locus tag: DVU0779
Name: atpF2
Funciton: ATP synthase F0, B subunit
Locus tag: DVU0778
Name: atpH
Funciton: ATP synthase delta chain (EC 3.6.3.14)
Locus tag: DVU0777
Name: atpA
Funciton: ATP synthase alpha chain (EC 3.6.3.14)
Locus tag: DVU0776
Name: atpG
Funciton: ATP synthase gamma chain (EC 3.6.3.14)
Locus tag: DVU0775
Name: atpD
Funciton: ATP synthase beta chain (EC 3.6.3.14)
Locus tag: DVU0774
Name: atpC
Funciton: ATP synthase epsilon chain (EC 3.6.3.14)
atpF1-atpF2-atpH-atpA-atpG-atpD-atpC -59 5 TTTGAGCTTTAATTCACAAC DVU0780
Desulfovibrio vulgaris str. Miyazaki F
Position: -38
Score: 4.90083
Sequence: TTTGAGCTTAAATTCACAAC
Locus tag: DvMF_2826
Name: atpF1
Funciton: ATP synthase B' chain (EC 3.6.3.14)
Locus tag: DvMF_2827
Name: atpF2
Funciton: ATP synthase F0, B subunit
Locus tag: DvMF_2828
Name: atpH
Funciton: ATP synthase delta chain (EC 3.6.3.14)
Locus tag: DvMF_2829
Name: atpA
Funciton: ATP synthase alpha chain (EC 3.6.3.14)
Locus tag: DvMF_2830
Name: atpG
Funciton: ATP synthase gamma chain (EC 3.6.3.14)
Locus tag: DvMF_2831
Name: atpD
Funciton: ATP synthase beta chain (EC 3.6.3.14)
Locus tag: DvMF_2832
Name: atpC
Funciton: ATP synthase epsilon chain (EC 3.6.3.14)
atpF1-atpF2-atpH-atpA-atpG-atpD-atpC -38 4.9 TTTGAGCTTAAATTCACAAC DvMF_2826
Lawsonia intracellularis PHE/MN1-00
Position: -171
Score: 4.69682
Sequence: TATGTTAAATGAAGCACAAG
Locus tag: LI0399
Name: atpF2
Funciton: ATP synthase F0, B subunit
Locus tag: LI0400
Name: atpH
Funciton: ATP synthase delta chain (EC 3.6.3.14)
Locus tag: LI0401
Name: atpA
Funciton: ATP synthase alpha chain (EC 3.6.3.14)
Locus tag: LI0402
Name: atpG
Funciton: ATP synthase gamma chain (EC 3.6.3.14)
Locus tag: LI0403
Name: atpD
Funciton: ATP synthase beta chain (EC 3.6.3.14)
Locus tag: LI0404
Name: atpC
Funciton: ATP synthase epsilon chain (EC 3.6.3.14)
atpF2-atpH-atpA-atpG-atpD-atpC -171 4.7 TATGTTAAATGAAGCACAAG LI0399
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